RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 HES3Q5TGS1 186 aa7.93□□□□□ -1.14
PNKP-229ENST00000637897 CDCP2Q5VXM1 449 aa7.93□□□□□ -1.14
PNKP-229ENST00000637897 KIAA1161Q6NSJ0 714 aa7.93□□□□□ -1.14
PNKP-229ENST00000637897 C19orf48Q6RUI8 117 aa7.93□□□□□ -1.14
PNKP-229ENST00000637897 SFTPA2Q8IWL1 248 aa7.93□□□□□ -1.14
PNKP-229ENST00000637897 RBFAQ8N0V3 343 aa7.93□□□□□ -1.14
PNKP-229ENST00000637897 PGBD5Q8N414 524 aa7.93□□□□□ -1.14
PNKP-229ENST00000637897 TSEN2Q8NCE0 465 aaKnown RBP7.93□□□□□ -1.14
PNKP-229ENST00000637897 OR4C6Q8NH72 309 aa7.93□□□□□ -1.14
PNKP-229ENST00000637897 FNIP1Q8TF40 1166 aa7.93□□□□□ -1.14
PNKP-229ENST00000637897 ASB12Q8WXK4 309 aa7.93□□□□□ -1.14
PNKP-229ENST00000637897 UBXN4Q92575 508 aa7.93□□□□□ -1.14
PNKP-229ENST00000637897 BBC3Q96PG8 261 aaPredicted RBP7.93□□□□□ -1.14
PNKP-229ENST00000637897 ALS2CR12Q96Q35 445 aa7.93□□□□□ -1.14
PNKP-229ENST00000637897 LACRTQ9GZZ8 138 aa7.93□□□□□ -1.14
PNKP-229ENST00000637897 CLPBQ9H078 707 aa7.93□□□□□ -1.14
PNKP-229ENST00000637897 AP4E1Q9UPM8 1137 aa7.93□□□□□ -1.14
PNKP-229ENST00000637897 COQ6Q9Y2Z9 468 aa7.93□□□□□ -1.14
PNKP-229ENST00000637897 A0A087X0T9 212 aa7.92□□□□□ -1.14
PNKP-229ENST00000637897 A0A0U1RQS6 177 aa7.92□□□□□ -1.14
PNKP-229ENST00000637897 PMS2P1A4D2B8 440 aa7.92□□□□□ -1.14
PNKP-229ENST00000637897 RCCD1A6NED2 376 aa7.92□□□□□ -1.14
PNKP-229ENST00000637897 BTNL10A8MVZ5 291 aa7.92□□□□□ -1.14
PNKP-229ENST00000637897 K7ESM1 405 aa7.92□□□□□ -1.14
PNKP-229ENST00000637897 FFAR2O15552 330 aa7.92□□□□□ -1.14
PNKP-229ENST00000637897 RFPL3O75679 317 aa7.92□□□□□ -1.14
PNKP-229ENST00000637897 CSF2P04141 144 aa7.92□□□□□ -1.14
PNKP-229ENST00000637897 CD48P09326 243 aa7.92□□□□□ -1.14
PNKP-229ENST00000637897 FAM228BP0C875 321 aa7.92□□□□□ -1.14
PNKP-229ENST00000637897 NME1P15531 152 aaKnown RBP7.92□□□□□ -1.14
PNKP-229ENST00000637897 CKMT2P17540 419 aa7.92□□□□□ -1.14
PNKP-229ENST00000637897 CR2P20023 1033 aa7.92□□□□□ -1.14
PNKP-229ENST00000637897 PSMA2P25787 234 aa7.92□□□□□ -1.14
PNKP-229ENST00000637897 AKT2P31751 481 aa7.92□□□□□ -1.14
PNKP-229ENST00000637897 ARRB1P49407 418 aaPredicted RBP7.92□□□□□ -1.14
PNKP-229ENST00000637897 ARSEP51690 589 aa7.92□□□□□ -1.14
PNKP-229ENST00000637897 SNRPD1P62314 119 aaKnown RBP7.92□□□□□ -1.14
PNKP-229ENST00000637897 RPS21P63220 83 aaKnown RBP7.92□□□□□ -1.14
PNKP-229ENST00000637897 SLC25A11Q02978 314 aaKnown RBP7.92□□□□□ -1.14
PNKP-229ENST00000637897 ZNF211Q13398 564 aaPredicted RBP7.92□□□□□ -1.14
PNKP-229ENST00000637897 WSCD2Q2TBF2 565 aa7.92□□□□□ -1.14
PNKP-229ENST00000637897 TMEM52BQ4KMG9 183 aa7.92□□□□□ -1.14
PNKP-229ENST00000637897 ATP13A4Q4VNC1 1196 aa7.92□□□□□ -1.14
PNKP-229ENST00000637897 EFHC2Q5JST6 749 aa7.92□□□□□ -1.14
PNKP-229ENST00000637897 ERMARDQ5T6L9 678 aa7.92□□□□□ -1.14
PNKP-229ENST00000637897 PAPD7Q5XG87 772 aaKnown RBP7.92□□□□□ -1.14
PNKP-229ENST00000637897 GDPD4Q6W3E5 623 aa7.92□□□□□ -1.14
PNKP-229ENST00000637897 RFX8Q6ZV50 586 aa7.92□□□□□ -1.14
PNKP-229ENST00000637897 TMPRSS12Q86WS5 348 aa7.92□□□□□ -1.14
PNKP-229ENST00000637897 CAMK1DQ8IU85 385 aa7.92□□□□□ -1.14
PNKP-229ENST00000637897 ZNF548Q8NEK5 533 aaPredicted RBP7.92□□□□□ -1.14
PNKP-229ENST00000637897 ECHDC3Q96DC8 303 aa7.92□□□□□ -1.14
PNKP-229ENST00000637897 LRIG1Q96JA1 1093 aa7.92□□□□□ -1.14
PNKP-229ENST00000637897 FEM1CQ96JP0 617 aa7.92□□□□□ -1.14
PNKP-229ENST00000637897 APOLD1Q96LR9 279 aa7.92□□□□□ -1.14
PNKP-229ENST00000637897 CCDC114Q96M63 670 aa7.92□□□□□ -1.14
PNKP-229ENST00000637897 SMIM14Q96QK8 99 aa7.92□□□□□ -1.14
PNKP-229ENST00000637897 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.92□□□□□ -1.14
PNKP-229ENST00000637897 CARD6Q9BX69 1037 aa7.92□□□□□ -1.14
PNKP-229ENST00000637897 CALN1Q9BXU9 219 aa7.92□□□□□ -1.14
PNKP-229ENST00000637897 CPEB1Q9BZB8 566 aaKnown RBP7.92□□□□□ -1.14
PNKP-229ENST00000637897 THAP2Q9H0W7 228 aa7.92□□□□□ -1.14
PNKP-229ENST00000637897 DHX35Q9H5Z1 703 aaKnown RBP7.92□□□□□ -1.14
PNKP-229ENST00000637897 CCDC86Q9H6F5 360 aaKnown RBP7.92□□□□□ -1.14
PNKP-229ENST00000637897 PARVAQ9NVD7 372 aa7.92□□□□□ -1.14
PNKP-229ENST00000637897 DKK3Q9UBP4 350 aa7.92□□□□□ -1.14
PNKP-229ENST00000637897 TRIM10Q9UDY6 481 aa7.92□□□□□ -1.14
PNKP-229ENST00000637897 CNOT8Q9UFF9 292 aaKnown RBP7.92□□□□□ -1.14
PNKP-229ENST00000637897 INTUQ9ULD6 942 aa7.92□□□□□ -1.14
PNKP-229ENST00000637897 JRKLQ9Y4A0 524 aa7.92□□□□□ -1.14
PNKP-229ENST00000637897 FARP1Q9Y4F1 1045 aaPredicted RBP7.92□□□□□ -1.14
PNKP-229ENST00000637897 PCDHB1Q9Y5F3 818 aa7.92□□□□□ -1.14
PNKP-229ENST00000637897 MGAQ8IWI9 3026 aa7.91□□□□□ -1.14
PNKP-229ENST00000637897 MACROD2A1Z1Q3 448 aa7.91□□□□□ -1.14
PNKP-229ENST00000637897 A6NNZ2 444 aa7.91□□□□□ -1.14
PNKP-229ENST00000637897 SCAMP1O15126 338 aa7.91□□□□□ -1.14
PNKP-229ENST00000637897 YKT6O15498 198 aa7.91□□□□□ -1.14
PNKP-229ENST00000637897 TSPAN6O43657 245 aa7.91□□□□□ -1.14
PNKP-229ENST00000637897 FUCA1P04066 466 aa7.91□□□□□ -1.14
PNKP-229ENST00000637897 RARAP10276 462 aa7.91□□□□□ -1.14
PNKP-229ENST00000637897 CKMT1AP12532 417 aa7.91□□□□□ -1.14
PNKP-229ENST00000637897 AMPD1P23109 780 aa7.91□□□□□ -1.14
PNKP-229ENST00000637897 ETFBP38117 255 aa7.91□□□□□ -1.14
PNKP-229ENST00000637897 RECQLP46063 649 aaPredicted RBP7.91□□□□□ -1.14
PNKP-229ENST00000637897 NDST2P52849 883 aa7.91□□□□□ -1.14
PNKP-229ENST00000637897 PDX1P52945 283 aa7.91□□□□□ -1.14
PNKP-229ENST00000637897 AIF1P55008 147 aa7.91□□□□□ -1.14
PNKP-229ENST00000637897 TPI1P60174 286 aa7.91□□□□□ -1.14
PNKP-229ENST00000637897 RHOAP61586 193 aa7.91□□□□□ -1.14
PNKP-229ENST00000637897 CKAP4Q07065 602 aaKnown RBP7.91□□□□□ -1.14
PNKP-229ENST00000637897 SLC10A7Q0GE19 358 aa7.91□□□□□ -1.14
PNKP-229ENST00000637897 MMRN1Q13201 1228 aa7.91□□□□□ -1.14
PNKP-229ENST00000637897 PDE1CQ14123 709 aaPredicted RBP7.91□□□□□ -1.14
PNKP-229ENST00000637897 IRF4Q15306 451 aa7.91□□□□□ -1.14
PNKP-229ENST00000637897 DPYSL2Q16555 572 aa7.91□□□□□ -1.14
PNKP-229ENST00000637897 IFI16Q16666 785 aaKnown RBP7.91□□□□□ -1.14
PNKP-229ENST00000637897 UGP2Q16851 508 aa7.91□□□□□ -1.14
PNKP-229ENST00000637897 SMTNL2Q2TAL5 461 aa7.91□□□□□ -1.14
PNKP-229ENST00000637897 COL28A1Q2UY09 1125 aa7.91□□□□□ -1.14
PNKP-229ENST00000637897 PARP15Q460N3 678 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms