RNA–Protein interactions for RNA: ENST00000637053.1

VIM-210, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-210ENST00000637053 FAM81AQ8TBF8 368 aa3.06□□□□□ -1.92
VIM-210ENST00000637053 PIP4K2CQ8TBX8 421 aa3.06□□□□□ -1.92
VIM-210ENST00000637053 ENKURQ8TC29 256 aa3.06□□□□□ -1.92
VIM-210ENST00000637053 PHOSPHO2Q8TCD6 241 aa3.06□□□□□ -1.92
VIM-210ENST00000637053 ST7LQ8TDW4 575 aa3.06□□□□□ -1.92
VIM-210ENST00000637053 PDCD6IPQ8WUM4 868 aaKnown RBP3.06□□□□□ -1.92
VIM-210ENST00000637053 PRPF31Q8WWY3 499 aaKnown RBP3.06□□□□□ -1.92
VIM-210ENST00000637053 LIPHQ8WWY8 451 aa3.06□□□□□ -1.92
VIM-210ENST00000637053 STARD8Q92502 1023 aa3.06□□□□□ -1.92
VIM-210ENST00000637053 BRF1Q92994 677 aa3.06□□□□□ -1.92
VIM-210ENST00000637053 FBXO32Q969P5 355 aa3.06□□□□□ -1.92
VIM-210ENST00000637053 NT5C3BQ969T7 300 aa3.06□□□□□ -1.92
VIM-210ENST00000637053 OPTNQ96CV9 577 aa3.06□□□□□ -1.92
VIM-210ENST00000637053 C14orf79Q96F83 325 aa3.06□□□□□ -1.92
VIM-210ENST00000637053 ERO1AQ96HE7 468 aa3.06□□□□□ -1.92
VIM-210ENST00000637053 ZBED3Q96IU2 234 aaPredicted RBP3.06□□□□□ -1.92
VIM-210ENST00000637053 TPD52L3Q96J77 140 aa3.06□□□□□ -1.92
VIM-210ENST00000637053 SLC6A18Q96N87 628 aa3.06□□□□□ -1.92
VIM-210ENST00000637053 PANX2Q96RD6 677 aa3.06□□□□□ -1.92
VIM-210ENST00000637053 ZBTB18Q99592 522 aa3.06□□□□□ -1.92
VIM-210ENST00000637053 PRPF18Q99633 342 aaKnown RBP3.06□□□□□ -1.92
VIM-210ENST00000637053 CCT7Q99832 543 aa3.06□□□□□ -1.92
VIM-210ENST00000637053 LBHD1Q9BQE6 289 aaPredicted RBP3.06□□□□□ -1.92
VIM-210ENST00000637053 SYT17Q9BSW7 474 aa3.06□□□□□ -1.92
VIM-210ENST00000637053 TUBB6Q9BUF5 446 aa3.06□□□□□ -1.92
VIM-210ENST00000637053 ZSCAN5AQ9BUG6 496 aa3.06□□□□□ -1.92
VIM-210ENST00000637053 SALL3Q9BXA9 1300 aa3.06□□□□□ -1.92
VIM-210ENST00000637053 TBC1D10AQ9BXI6 508 aa3.06□□□□□ -1.92
VIM-210ENST00000637053 CACNG6Q9BXT2 260 aa3.06□□□□□ -1.92
VIM-210ENST00000637053 EIF2AQ9BY44 585 aaKnown RBP3.06□□□□□ -1.92
VIM-210ENST00000637053 UPF3BQ9BZI7 483 aaKnown RBP3.06□□□□□ -1.92
VIM-210ENST00000637053 WDR33Q9C0J8 1336 aaKnown RBP3.06□□□□□ -1.92
VIM-210ENST00000637053 POLR1EQ9GZS1 481 aaKnown RBP3.06□□□□□ -1.92
VIM-210ENST00000637053 RAB33BQ9H082 229 aa3.06□□□□□ -1.92
VIM-210ENST00000637053 SLC26A1Q9H2B4 701 aa3.06□□□□□ -1.92
VIM-210ENST00000637053 EXO5Q9H790 373 aa3.06□□□□□ -1.92
VIM-210ENST00000637053 NOD2Q9HC29 1040 aa3.06□□□□□ -1.92
VIM-210ENST00000637053 MRM3Q9HC36 420 aaKnown RBP3.06□□□□□ -1.92
VIM-210ENST00000637053 SYTL2Q9HCH5 934 aa3.06□□□□□ -1.92
VIM-210ENST00000637053 TREM1Q9NP99 234 aa3.06□□□□□ -1.92
VIM-210ENST00000637053 NGBQ9NPG2 151 aa3.06□□□□□ -1.92
VIM-210ENST00000637053 NECTIN3Q9NQS3 549 aa3.06□□□□□ -1.92
VIM-210ENST00000637053 PRDM8Q9NQV8 689 aa3.06□□□□□ -1.92
VIM-210ENST00000637053 MBNL1Q9NR56 388 aaKnown RBP3.06□□□□□ -1.92
VIM-210ENST00000637053 ARHGEF3Q9NR81 526 aa3.06□□□□□ -1.92
VIM-210ENST00000637053 KLC4Q9NSK0 619 aa3.06□□□□□ -1.92
VIM-210ENST00000637053 NRBP2Q9NSY0 501 aa3.06□□□□□ -1.92
VIM-210ENST00000637053 TBC1D23Q9NUY8 699 aa3.06□□□□□ -1.92
VIM-210ENST00000637053 TMEM140Q9NV12 185 aa3.06□□□□□ -1.92
VIM-210ENST00000637053 TBC1D13Q9NVG8 400 aa3.06□□□□□ -1.92
VIM-210ENST00000637053 FAM120CQ9NX05 1096 aaKnown RBP3.06□□□□□ -1.92
VIM-210ENST00000637053 ZDHHC7Q9NXF8 308 aa3.06□□□□□ -1.92
VIM-210ENST00000637053 STK32BQ9NY57 414 aa3.06□□□□□ -1.92
VIM-210ENST00000637053 IL37Q9NZH6 218 aa3.06□□□□□ -1.92
VIM-210ENST00000637053 PKD2L2Q9NZM6 624 aa3.06□□□□□ -1.92
VIM-210ENST00000637053 COL20A1Q9P218 1284 aa3.06□□□□□ -1.92
VIM-210ENST00000637053 ANKMY1Q9P2S6 941 aa3.06□□□□□ -1.92
VIM-210ENST00000637053 STX18Q9P2W9 335 aaKnown RBP3.06□□□□□ -1.92
VIM-210ENST00000637053 SEC63Q9UGP8 760 aaKnown RBP3.06□□□□□ -1.92
VIM-210ENST00000637053 TUBE1Q9UJT0 475 aa3.06□□□□□ -1.92
VIM-210ENST00000637053 DSEQ9UL01 958 aa3.06□□□□□ -1.92
VIM-210ENST00000637053 INTS6Q9UL03 887 aaKnown RBP3.06□□□□□ -1.92
VIM-210ENST00000637053 MTMR6Q9Y217 621 aa3.06□□□□□ -1.92
VIM-210ENST00000637053 TESMINQ9Y4I5 508 aa3.06□□□□□ -1.92
VIM-210ENST00000637053 HS3ST4Q9Y661 456 aa3.06□□□□□ -1.92
VIM-210ENST00000637053 NFS1Q9Y697 457 aa3.06□□□□□ -1.92
VIM-210ENST00000637053 TEX264Q9Y6I9 313 aa3.06□□□□□ -1.92
VIM-210ENST00000637053 SH3TC1Q8TE82 1336 aa3.05□□□□□ -1.92
VIM-210ENST00000637053 C1orf232A0A0U1RR37 186 aa3.05□□□□□ -1.92
VIM-210ENST00000637053 A0A1W2PN81 502 aa3.05□□□□□ -1.92
VIM-210ENST00000637053 ERICH2A1L162 156 aa3.05□□□□□ -1.92
VIM-210ENST00000637053 GOLGA8OA6NCC3 632 aa3.05□□□□□ -1.92
VIM-210ENST00000637053 CLCA1A8K7I4 914 aa3.05□□□□□ -1.92
VIM-210ENST00000637053 TMEM232C9JQI7 657 aa3.05□□□□□ -1.92
VIM-210ENST00000637053 GOLGA8NF8WBI6 632 aa3.05□□□□□ -1.92
VIM-210ENST00000637053 H7C1D1 291 aa3.05□□□□□ -1.92
VIM-210ENST00000637053 MYO1CO00159 1063 aa3.05□□□□□ -1.92
VIM-210ENST00000637053 SHOXO15266 292 aa3.05□□□□□ -1.92
VIM-210ENST00000637053 EIF3DO15371 548 aaKnown RBP eCLIP3.05□□□□□ -1.92
VIM-210ENST00000637053 CLDN3O15551 220 aa3.05□□□□□ -1.92
VIM-210ENST00000637053 PPP1R11O60927 126 aaPredicted RBP3.05□□□□□ -1.92
VIM-210ENST00000637053 CLEC3AO75596 197 aa3.05□□□□□ -1.92
VIM-210ENST00000637053 RECQL5O94762 991 aaPredicted RBP3.05□□□□□ -1.92
VIM-210ENST00000637053 MFN2O95140 757 aa3.05□□□□□ -1.92
VIM-210ENST00000637053 VNN2O95498 520 aa3.05□□□□□ -1.92
VIM-210ENST00000637053 ANXA2P07355 339 aaKnown RBP3.05□□□□□ -1.92
VIM-210ENST00000637053 SNRPB2P08579 225 aaKnown RBP3.05□□□□□ -1.92
VIM-210ENST00000637053 SERPINF2P08697 491 aa3.05□□□□□ -1.92
VIM-210ENST00000637053 ALOX5P09917 674 aa3.05□□□□□ -1.92
VIM-210ENST00000637053 SELLP14151 372 aa3.05□□□□□ -1.92
VIM-210ENST00000637053 IDO1P14902 403 aa3.05□□□□□ -1.92
VIM-210ENST00000637053 CHN1P15882 459 aa3.05□□□□□ -1.92
VIM-210ENST00000637053 NPR1P16066 1061 aa3.05□□□□□ -1.92
VIM-210ENST00000637053 HNRNPA2B1P22626 353 aaKnown RBP3.05□□□□□ -1.92
VIM-210ENST00000637053 ADRA1DP25100 572 aa3.05□□□□□ -1.92
VIM-210ENST00000637053 NMT1P30419 496 aaKnown RBP3.05□□□□□ -1.92
VIM-210ENST00000637053 GUCY1A2P33402 732 aa3.05□□□□□ -1.92
VIM-210ENST00000637053 CHRNA7P36544 502 aa3.05□□□□□ -1.92
VIM-210ENST00000637053 PGM1P36871 562 aa3.05□□□□□ -1.92
VIM-210ENST00000637053 CAPGP40121 348 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms