RNA–Protein interactions for RNA: ENST00000636840.1

PNKP-226, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 117 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-226ENST00000636840 OTUD4Q01804 1114 aaKnown RBP8.28□□□□□ -1.08
PNKP-226ENST00000636840 ZNF211Q13398 564 aaPredicted RBP8.28□□□□□ -1.08
PNKP-226ENST00000636840 PRPSAP1Q14558 356 aa8.28□□□□□ -1.08
PNKP-226ENST00000636840 NOMO1Q15155 1222 aa8.28□□□□□ -1.08
PNKP-226ENST00000636840 TMEM52BQ4KMG9 183 aa8.28□□□□□ -1.08
PNKP-226ENST00000636840 ITPRIPL1Q6GPH6 555 aa8.28□□□□□ -1.08
PNKP-226ENST00000636840 PGBD5Q8N414 524 aa8.28□□□□□ -1.08
PNKP-226ENST00000636840 OXR1Q8N573 874 aa8.28□□□□□ -1.08
PNKP-226ENST00000636840 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.28□□□□□ -1.08
PNKP-226ENST00000636840 ACTL9Q8TC94 416 aa8.28□□□□□ -1.08
PNKP-226ENST00000636840 ALG3Q92685 438 aa8.28□□□□□ -1.08
PNKP-226ENST00000636840 KLK6Q92876 244 aa8.28□□□□□ -1.08
PNKP-226ENST00000636840 ECHDC3Q96DC8 303 aa8.28□□□□□ -1.08
PNKP-226ENST00000636840 IFT43Q96FT9 208 aa8.28□□□□□ -1.08
PNKP-226ENST00000636840 TEKT5Q96M29 485 aa8.28□□□□□ -1.08
PNKP-226ENST00000636840 AGAP3Q96P47 875 aa8.28□□□□□ -1.08
PNKP-226ENST00000636840 OLFM3Q96PB7 478 aa8.28□□□□□ -1.08
PNKP-226ENST00000636840 LENG8Q96PV6 779 aaPredicted RBP8.28□□□□□ -1.08
PNKP-226ENST00000636840 EDEM2Q9BV94 578 aa8.28□□□□□ -1.08
PNKP-226ENST00000636840 C1QTNF2Q9BXJ5 285 aa8.28□□□□□ -1.08
PNKP-226ENST00000636840 SLC25A51Q9H1U9 297 aa8.28□□□□□ -1.08
PNKP-226ENST00000636840 CARD9Q9H257 536 aa8.28□□□□□ -1.08
PNKP-226ENST00000636840 PCDH9Q9HC56 1237 aa8.28□□□□□ -1.08
PNKP-226ENST00000636840 CAPN10Q9HC96 672 aa8.28□□□□□ -1.08
PNKP-226ENST00000636840 PARD6AQ9NPB6 346 aa8.28□□□□□ -1.08
PNKP-226ENST00000636840 PCDH12Q9NPG4 1184 aa8.28□□□□□ -1.08
PNKP-226ENST00000636840 HOMER3Q9NSC5 361 aa8.28□□□□□ -1.08
PNKP-226ENST00000636840 GOLGA6AQ9NYA3 693 aa8.28□□□□□ -1.08
PNKP-226ENST00000636840 KLHL8Q9P2G9 620 aaPredicted RBP8.28□□□□□ -1.08
PNKP-226ENST00000636840 RPL26L1Q9UNX3 145 aaKnown RBP8.28□□□□□ -1.08
PNKP-226ENST00000636840 ANKRD6Q9Y2G4 727 aa8.28□□□□□ -1.08
PNKP-226ENST00000636840 JRKLQ9Y4A0 524 aa8.28□□□□□ -1.08
PNKP-226ENST00000636840 RAI2Q9Y5P3 530 aa8.28□□□□□ -1.08
PNKP-226ENST00000636840 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.28□□□□□ -1.08
PNKP-226ENST00000636840 CAPN6Q9Y6Q1 641 aa8.28□□□□□ -1.08
PNKP-226ENST00000636840 SHROOM3Q8TF72 1996 aa8.28□□□□□ -1.08
PNKP-226ENST00000636840 GVINP1Q7Z2Y8 2422 aa8.28□□□□□ -1.08
PNKP-226ENST00000636840 TRPM6Q9BX84 2022 aa8.27□□□□□ -1.09
PNKP-226ENST00000636840 A0A0U1RQJ8 604 aa8.27□□□□□ -1.09
PNKP-226ENST00000636840 A0A1B0GVT2 93 aa8.27□□□□□ -1.09
PNKP-226ENST00000636840 TTC24A2A3L6 582 aaPredicted RBP8.27□□□□□ -1.09
PNKP-226ENST00000636840 PATE3B3GLJ2 98 aa8.27□□□□□ -1.09
PNKP-226ENST00000636840 TLR4O00206 839 aa8.27□□□□□ -1.09
PNKP-226ENST00000636840 TRAFD1O14545 582 aaPredicted RBP8.27□□□□□ -1.09
PNKP-226ENST00000636840 PSMD3O43242 534 aa8.27□□□□□ -1.09
PNKP-226ENST00000636840 ANXA9O76027 345 aa8.27□□□□□ -1.09
PNKP-226ENST00000636840 PGLSO95336 258 aa8.27□□□□□ -1.09
PNKP-226ENST00000636840 HLA-DQB2P05538 268 aa8.27□□□□□ -1.09
PNKP-226ENST00000636840 ELFN1P0C7U0 828 aa8.27□□□□□ -1.09
PNKP-226ENST00000636840 PECAM1P16284 738 aaPredicted RBP8.27□□□□□ -1.09
PNKP-226ENST00000636840 CD86P42081 329 aa8.27□□□□□ -1.09
PNKP-226ENST00000636840 ABL2P42684 1182 aa8.27□□□□□ -1.09
PNKP-226ENST00000636840 ARRB1P49407 418 aaPredicted RBP8.27□□□□□ -1.09
PNKP-226ENST00000636840 LIG3P49916 1009 aa8.27□□□□□ -1.09
PNKP-226ENST00000636840 LIMK1P53667 647 aa8.27□□□□□ -1.09
PNKP-226ENST00000636840 PPP2CBP62714 309 aa8.27□□□□□ -1.09
PNKP-226ENST00000636840 PPP2CAP67775 309 aa8.27□□□□□ -1.09
PNKP-226ENST00000636840 DSC2Q02487 901 aa8.27□□□□□ -1.09
PNKP-226ENST00000636840 SLC14A1Q13336 389 aa8.27□□□□□ -1.09
PNKP-226ENST00000636840 PTK2BQ14289 1009 aa8.27□□□□□ -1.09
PNKP-226ENST00000636840 PRKD1Q15139 912 aaPredicted RBP8.27□□□□□ -1.09
PNKP-226ENST00000636840 ZNF284Q2VY69 593 aa8.27□□□□□ -1.09
PNKP-226ENST00000636840 UAP1L1Q3KQV9 507 aa8.27□□□□□ -1.09
PNKP-226ENST00000636840 ZNF569Q5MCW4 686 aa8.27□□□□□ -1.09
PNKP-226ENST00000636840 STPG1Q5TH74 334 aa8.27□□□□□ -1.09
PNKP-226ENST00000636840 ALG1LQ6GMV1 187 aa8.27□□□□□ -1.09
PNKP-226ENST00000636840 DENND6BQ8NEG7 585 aa8.27□□□□□ -1.09
PNKP-226ENST00000636840 ATL2Q8NHH9 583 aa8.27□□□□□ -1.09
PNKP-226ENST00000636840 C1orf216Q8TAB5 229 aa8.27□□□□□ -1.09
PNKP-226ENST00000636840 CCHCR1Q8TD31 782 aa8.27□□□□□ -1.09
PNKP-226ENST00000636840 SPOCK2Q92563 424 aa8.27□□□□□ -1.09
PNKP-226ENST00000636840 RMDN1Q96DB5 314 aa8.27□□□□□ -1.09
PNKP-226ENST00000636840 SCRN2Q96FV2 425 aa8.27□□□□□ -1.09
PNKP-226ENST00000636840 PBKQ96KB5 322 aa8.27□□□□□ -1.09
PNKP-226ENST00000636840 NAP1L3Q99457 506 aaPredicted RBP8.27□□□□□ -1.09
PNKP-226ENST00000636840 RTKNQ9BST9 563 aa8.27□□□□□ -1.09
PNKP-226ENST00000636840 WRAP53Q9BUR4 548 aaKnown RBP8.27□□□□□ -1.09
PNKP-226ENST00000636840 MLPHQ9BV36 600 aaPredicted RBP8.27□□□□□ -1.09
PNKP-226ENST00000636840 SMOC1Q9H4F8 434 aa8.27□□□□□ -1.09
PNKP-226ENST00000636840 GLOD4Q9HC38 313 aa8.27□□□□□ -1.09
PNKP-226ENST00000636840 GDF3Q9NR23 364 aa8.27□□□□□ -1.09
PNKP-226ENST00000636840 TRMT1Q9NXH9 659 aaKnown RBP8.27□□□□□ -1.09
PNKP-226ENST00000636840 FAM153AQ9UHL3 310 aa8.27□□□□□ -1.09
PNKP-226ENST00000636840 ZFR2Q9UPR6 939 aaKnown RBP8.27□□□□□ -1.09
PNKP-226ENST00000636840 PPIL1Q9Y3C6 166 aa8.27□□□□□ -1.09
PNKP-226ENST00000636840 A6NNZ2 444 aa8.26□□□□□ -1.09
PNKP-226ENST00000636840 C4orf47A7E2U8 309 aa8.26□□□□□ -1.09
PNKP-226ENST00000636840 PSMD11O00231 422 aa8.26□□□□□ -1.09
PNKP-226ENST00000636840 RNF103O00237 685 aa8.26□□□□□ -1.09
PNKP-226ENST00000636840 PDE2AO00408 941 aaPredicted RBP8.26□□□□□ -1.09
PNKP-226ENST00000636840 YKT6O15498 198 aa8.26□□□□□ -1.09
PNKP-226ENST00000636840 KCNN4O15554 427 aa8.26□□□□□ -1.09
PNKP-226ENST00000636840 CEP104O60308 925 aa8.26□□□□□ -1.09
PNKP-226ENST00000636840 PRLRP16471 622 aa8.26□□□□□ -1.09
PNKP-226ENST00000636840 ZNF30P17039 623 aa8.26□□□□□ -1.09
PNKP-226ENST00000636840 PTPN3P26045 913 aa8.26□□□□□ -1.09
PNKP-226ENST00000636840 RBL1P28749 1068 aa8.26□□□□□ -1.09
PNKP-226ENST00000636840 VIPR1P32241 457 aa8.26□□□□□ -1.09
PNKP-226ENST00000636840 RABIFP47224 123 aa8.26□□□□□ -1.09
PNKP-226ENST00000636840 THOP1P52888 689 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms