RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 AARS2Q5JTZ9 985 aaKnown RBP14.9□□□□□ -0.02
CACNA1A-220ENST00000635988 EPHX4Q8IUS5 362 aa14.9□□□□□ -0.02
CACNA1A-220ENST00000635988 DHRSXQ8N5I4 330 aa14.9□□□□□ -0.02
CACNA1A-220ENST00000635988 MINDY1Q8N5J2 469 aa14.9□□□□□ -0.02
CACNA1A-220ENST00000635988 PPHLN1Q8NEY8 458 aaKnown RBP14.9□□□□□ -0.02
CACNA1A-220ENST00000635988 TNIP3Q96KP6 325 aa14.9□□□□□ -0.02
CACNA1A-220ENST00000635988 C1orf50Q9BV19 199 aa14.9□□□□□ -0.02
CACNA1A-220ENST00000635988 MUC13Q9H3R2 512 aa14.9□□□□□ -0.02
CACNA1A-220ENST00000635988 TMEM165Q9HC07 324 aa14.9□□□□□ -0.02
CACNA1A-220ENST00000635988 PIGVQ9NUD9 493 aa14.9□□□□□ -0.02
CACNA1A-220ENST00000635988 TRAF6Q9Y4K3 522 aa14.9□□□□□ -0.02
CACNA1A-220ENST00000635988 A0A0G2JMZ2 1700 aa14.9□□□□□ -0.02
CACNA1A-220ENST00000635988 LRRC37A2A6NM11 1700 aa14.9□□□□□ -0.02
CACNA1A-220ENST00000635988 TANC1Q9C0D5 1861 aa14.89□□□□□ -0.03
CACNA1A-220ENST00000635988 IQCA1LA6NCM1 817 aa14.89□□□□□ -0.03
CACNA1A-220ENST00000635988 APBA3O96018 575 aa14.89□□□□□ -0.03
CACNA1A-220ENST00000635988 RPL10P27635 214 aaKnown RBP14.89□□□□□ -0.03
CACNA1A-220ENST00000635988 CAPGP40121 348 aa14.89□□□□□ -0.03
CACNA1A-220ENST00000635988 CCT8P50990 548 aa14.89□□□□□ -0.03
CACNA1A-220ENST00000635988 ZNF33AQ06730 810 aa14.89□□□□□ -0.03
CACNA1A-220ENST00000635988 CTBP1Q13363 440 aa14.89□□□□□ -0.03
CACNA1A-220ENST00000635988 ZBTB6Q15916 424 aa14.89□□□□□ -0.03
CACNA1A-220ENST00000635988 NIPAL1Q6NVV3 410 aa14.89□□□□□ -0.03
CACNA1A-220ENST00000635988 DCLRE1AQ6PJP8 1040 aa14.89□□□□□ -0.03
CACNA1A-220ENST00000635988 LARP4Q71RC2 724 aaKnown RBP eCLIP14.89□□□□□ -0.03
CACNA1A-220ENST00000635988 DENND6AQ8IWF6 608 aa14.89□□□□□ -0.03
CACNA1A-220ENST00000635988 LINC01465Q8N7H1 131 aa14.89□□□□□ -0.03
CACNA1A-220ENST00000635988 TRUB1Q8WWH5 349 aaKnown RBP14.89□□□□□ -0.03
CACNA1A-220ENST00000635988 CYGBQ8WWM9 190 aa14.89□□□□□ -0.03
CACNA1A-220ENST00000635988 MYRFLQ96LU7 910 aa14.89□□□□□ -0.03
CACNA1A-220ENST00000635988 PPP1R16BQ96T49 567 aa14.89□□□□□ -0.03
CACNA1A-220ENST00000635988 B3GNT3Q9Y2A9 372 aa14.89□□□□□ -0.03
CACNA1A-220ENST00000635988 FADS3Q9Y5Q0 445 aa14.89□□□□□ -0.03
CACNA1A-220ENST00000635988 A8MT66 165 aa14.89□□□□□ -0.03
CACNA1A-220ENST00000635988 FAM72CH0Y354 149 aa14.89□□□□□ -0.03
CACNA1A-220ENST00000635988 TFPTP0C1Z6 253 aa14.89□□□□□ -0.03
CACNA1A-220ENST00000635988 TMBIM6P55061 237 aa14.89□□□□□ -0.03
CACNA1A-220ENST00000635988 ARL13BQ3SXY8 428 aa14.89□□□□□ -0.03
CACNA1A-220ENST00000635988 FGD3Q5JSP0 725 aa14.89□□□□□ -0.03
CACNA1A-220ENST00000635988 FAM72AQ5TYM5 149 aa14.89□□□□□ -0.03
CACNA1A-220ENST00000635988 FAM72DQ6L9T8 149 aa14.89□□□□□ -0.03
CACNA1A-220ENST00000635988 KCTD8Q6ZWB6 473 aa14.89□□□□□ -0.03
CACNA1A-220ENST00000635988 FAM72BQ86X60 149 aa14.89□□□□□ -0.03
CACNA1A-220ENST00000635988 MFSD6LQ8IWD5 586 aa14.89□□□□□ -0.03
CACNA1A-220ENST00000635988 CENPSQ8N2Z9 138 aa14.89□□□□□ -0.03
CACNA1A-220ENST00000635988 SPATA6LQ8N4H0 392 aa14.89□□□□□ -0.03
CACNA1A-220ENST00000635988 C2CD4AQ8NCU7 369 aaPredicted RBP14.89□□□□□ -0.03
CACNA1A-220ENST00000635988 TRPV3Q8NET8 790 aa14.89□□□□□ -0.03
CACNA1A-220ENST00000635988 TDRD1Q9BXT4 1180 aaKnown RBP14.89□□□□□ -0.03
CACNA1A-220ENST00000635988 CDHR5Q9HBB8 845 aa14.89□□□□□ -0.03
CACNA1A-220ENST00000635988 IGSF5Q9NSI5 407 aa14.89□□□□□ -0.03
CACNA1A-220ENST00000635988 GID8Q9NWU2 228 aa14.89□□□□□ -0.03
CACNA1A-220ENST00000635988 SELENONQ9NZV5 590 aa14.89□□□□□ -0.03
CACNA1A-220ENST00000635988 SEPT3Q9UH03 358 aa14.89□□□□□ -0.03
CACNA1A-220ENST00000635988 CITO14578 2027 aa14.89□□□□□ -0.03
CACNA1A-220ENST00000635988 ZSWIM8A7E2V4 1837 aa14.88□□□□□ -0.03
CACNA1A-220ENST00000635988 CACNG3O60359 315 aa14.88□□□□□ -0.03
CACNA1A-220ENST00000635988 JCHAINP01591 159 aa14.88□□□□□ -0.03
CACNA1A-220ENST00000635988 ARCN1P48444 511 aaKnown RBP14.88□□□□□ -0.03
CACNA1A-220ENST00000635988 GSTM4Q03013 218 aa14.88□□□□□ -0.03
CACNA1A-220ENST00000635988 FBXO47Q5MNV8 452 aa14.88□□□□□ -0.03
CACNA1A-220ENST00000635988 C9orf57Q5W0N0 161 aa14.88□□□□□ -0.03
CACNA1A-220ENST00000635988 ANKRD26P1Q6NSI1 321 aa14.88□□□□□ -0.03
CACNA1A-220ENST00000635988 TMEM26Q6ZUK4 368 aa14.88□□□□□ -0.03
CACNA1A-220ENST00000635988 NPWQ8N729 165 aa14.88□□□□□ -0.03
CACNA1A-220ENST00000635988 GABPB2Q8TAK5 448 aaPredicted RBP14.88□□□□□ -0.03
CACNA1A-220ENST00000635988 KCTD13Q8WZ19 329 aa14.88□□□□□ -0.03
CACNA1A-220ENST00000635988 ZMAT2Q96NC0 199 aaKnown RBP14.88□□□□□ -0.03
CACNA1A-220ENST00000635988 DUSP16Q9BY84 665 aa14.88□□□□□ -0.03
CACNA1A-220ENST00000635988 SPATC1LQ9H0A9 340 aa14.88□□□□□ -0.03
CACNA1A-220ENST00000635988 QTRT2Q9H974 415 aaKnown RBP14.88□□□□□ -0.03
CACNA1A-220ENST00000635988 SMPD3Q9NY59 655 aaPredicted RBP14.88□□□□□ -0.03
CACNA1A-220ENST00000635988 UBP1Q9NZI7 540 aa14.88□□□□□ -0.03
CACNA1A-220ENST00000635988 CCDC78A2IDD5 438 aa14.88□□□□□ -0.03
CACNA1A-220ENST00000635988 NEMP2A6NFY4 417 aa14.88□□□□□ -0.03
CACNA1A-220ENST00000635988 NME4O00746 187 aa14.88□□□□□ -0.03
CACNA1A-220ENST00000635988 HCRTO43612 131 aa14.88□□□□□ -0.03
CACNA1A-220ENST00000635988 ANXA9O76027 345 aa14.88□□□□□ -0.03
CACNA1A-220ENST00000635988 VTNP04004 478 aa14.88□□□□□ -0.03
CACNA1A-220ENST00000635988 LTA4HP09960 611 aaKnown RBP14.88□□□□□ -0.03
CACNA1A-220ENST00000635988 CPB1P15086 417 aa14.88□□□□□ -0.03
CACNA1A-220ENST00000635988 CCNA2P20248 432 aa14.88□□□□□ -0.03
CACNA1A-220ENST00000635988 LMO2P25791 158 aa14.88□□□□□ -0.03
CACNA1A-220ENST00000635988 HLCSP50747 726 aa14.88□□□□□ -0.03
CACNA1A-220ENST00000635988 CCR3P51677 355 aa14.88□□□□□ -0.03
CACNA1A-220ENST00000635988 FOXM1Q08050 763 aa14.88□□□□□ -0.03
CACNA1A-220ENST00000635988 CSHL1Q14406 222 aa14.88□□□□□ -0.03
CACNA1A-220ENST00000635988 CCNYL2Q5T2Q4 361 aa14.88□□□□□ -0.03
CACNA1A-220ENST00000635988 NANOGP8Q6NSW7 305 aa14.88□□□□□ -0.03
CACNA1A-220ENST00000635988 FAM117BQ6P1L5 589 aa14.88□□□□□ -0.03
CACNA1A-220ENST00000635988 XKR5Q6UX68 686 aa14.88□□□□□ -0.03
CACNA1A-220ENST00000635988 GADL1Q6ZQY3 521 aa14.88□□□□□ -0.03
CACNA1A-220ENST00000635988 KIAA0408Q6ZU52 694 aa14.88□□□□□ -0.03
CACNA1A-220ENST00000635988 LEMD2Q8NC56 503 aa14.88□□□□□ -0.03
CACNA1A-220ENST00000635988 NDRG1Q92597 394 aaKnown RBP14.88□□□□□ -0.03
CACNA1A-220ENST00000635988 TSPAN17Q96FV3 270 aa14.88□□□□□ -0.03
CACNA1A-220ENST00000635988 PPP1R2P1Q96PQ5 205 aa14.88□□□□□ -0.03
CACNA1A-220ENST00000635988 HNRNPABQ99729 332 aaKnown RBP14.88□□□□□ -0.03
CACNA1A-220ENST00000635988 TBL1YQ9BQ87 522 aa14.88□□□□□ -0.03
CACNA1A-220ENST00000635988 CYP4F12Q9HCS2 524 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms