RNA–Protein interactions for RNA: ENST00000635917.1

CACNA1A-219, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,832 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-219ENST00000635917 LCA5Q86VQ0 697 aa12.6□□□□□ -0.39
CACNA1A-219ENST00000635917 C7orf61Q8IZ16 206 aa12.6□□□□□ -0.39
CACNA1A-219ENST00000635917 APCDD1Q8J025 514 aa12.6□□□□□ -0.39
CACNA1A-219ENST00000635917 ELMOD1Q8N336 334 aa12.6□□□□□ -0.39
CACNA1A-219ENST00000635917 TDRD5Q8NAT2 981 aaKnown RBP12.6□□□□□ -0.39
CACNA1A-219ENST00000635917 CALML6Q8TD86 181 aa12.6□□□□□ -0.39
CACNA1A-219ENST00000635917 HDAC10Q969S8 669 aa12.6□□□□□ -0.39
CACNA1A-219ENST00000635917 GPR78Q96P69 363 aa12.6□□□□□ -0.39
CACNA1A-219ENST00000635917 ZNF395Q9H8N7 513 aaPredicted RBP12.6□□□□□ -0.39
CACNA1A-219ENST00000635917 NPHS2Q9NP85 383 aa12.6□□□□□ -0.39
CACNA1A-219ENST00000635917 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.6□□□□□ -0.39
CACNA1A-219ENST00000635917 LSM7Q9UK45 103 aaKnown RBP12.6□□□□□ -0.39
CACNA1A-219ENST00000635917 SLC39A10Q9ULF5 831 aa12.6□□□□□ -0.39
CACNA1A-219ENST00000635917 CCL26Q9Y258 94 aa12.6□□□□□ -0.39
CACNA1A-219ENST00000635917 FAM95CA0A1B0GW59 222 aa12.59□□□□□ -0.39
CACNA1A-219ENST00000635917 E2F8A0AVK6 867 aa12.59□□□□□ -0.39
CACNA1A-219ENST00000635917 G3V2L1 256 aa12.59□□□□□ -0.39
CACNA1A-219ENST00000635917 GRM6O15303 877 aa12.59□□□□□ -0.39
CACNA1A-219ENST00000635917 FZD6O60353 706 aa12.59□□□□□ -0.39
CACNA1A-219ENST00000635917 WISP3O95389 354 aaPredicted RBP12.59□□□□□ -0.39
CACNA1A-219ENST00000635917 S1PR4O95977 384 aa12.59□□□□□ -0.39
CACNA1A-219ENST00000635917 MT-CO1P00395 513 aa12.59□□□□□ -0.39
CACNA1A-219ENST00000635917 MYL4P12829 197 aa12.59□□□□□ -0.39
CACNA1A-219ENST00000635917 SYN1P17600 705 aa12.59□□□□□ -0.39
CACNA1A-219ENST00000635917 SCTRP47872 440 aa12.59□□□□□ -0.39
CACNA1A-219ENST00000635917 CD151P48509 253 aa12.59□□□□□ -0.39
CACNA1A-219ENST00000635917 ZNF140P52738 457 aaPredicted RBP12.59□□□□□ -0.39
CACNA1A-219ENST00000635917 IRX4P78413 519 aa12.59□□□□□ -0.39
CACNA1A-219ENST00000635917 TMPRSS15P98073 1019 aa12.59□□□□□ -0.39
CACNA1A-219ENST00000635917 BNIP1Q12981 228 aa12.59□□□□□ -0.39
CACNA1A-219ENST00000635917 THOC5Q13769 683 aaKnown RBP12.59□□□□□ -0.39
CACNA1A-219ENST00000635917 PPM1LQ5SGD2 360 aa12.59□□□□□ -0.39
CACNA1A-219ENST00000635917 ATG16L1Q676U5 607 aa12.59□□□□□ -0.39
CACNA1A-219ENST00000635917 LMNTD2Q8IXW0 634 aa12.59□□□□□ -0.39
CACNA1A-219ENST00000635917 PNPLA1Q8N8W4 532 aa12.59□□□□□ -0.39
CACNA1A-219ENST00000635917 MDGA1Q8NFP4 955 aa12.59□□□□□ -0.39
CACNA1A-219ENST00000635917 GPR150Q8NGU9 434 aa12.59□□□□□ -0.39
CACNA1A-219ENST00000635917 FIBINQ8TAL6 211 aa12.59□□□□□ -0.39
CACNA1A-219ENST00000635917 TBATAQ96M53 351 aa12.59□□□□□ -0.39
CACNA1A-219ENST00000635917 MARCH4Q9P2E8 410 aaPredicted RBP12.59□□□□□ -0.39
CACNA1A-219ENST00000635917 VPS28Q9UK41 221 aa12.59□□□□□ -0.39
CACNA1A-219ENST00000635917 INTS6Q9UL03 887 aaKnown RBP12.59□□□□□ -0.39
CACNA1A-219ENST00000635917 RWDD3Q9Y3V2 267 aa12.59□□□□□ -0.39
CACNA1A-219ENST00000635917 SPO11Q9Y5K1 396 aa12.59□□□□□ -0.39
CACNA1A-219ENST00000635917 ZNF106Q9H2Y7 1883 aaKnown RBP12.58□□□□□ -0.39
CACNA1A-219ENST00000635917 CCL22O00626 93 aa12.58□□□□□ -0.4
CACNA1A-219ENST00000635917 PHGDHO43175 533 aaKnown RBP12.58□□□□□ -0.4
CACNA1A-219ENST00000635917 PIRTP0C851 137 aa12.58□□□□□ -0.4
CACNA1A-219ENST00000635917 COL6A2P12110 1019 aa12.58□□□□□ -0.4
CACNA1A-219ENST00000635917 PLK1P53350 603 aa12.58□□□□□ -0.4
CACNA1A-219ENST00000635917 TAS2R39P59534 338 aa12.58□□□□□ -0.4
CACNA1A-219ENST00000635917 RAB10P61026 200 aa12.58□□□□□ -0.4
CACNA1A-219ENST00000635917 TRAF2Q12933 501 aa12.58□□□□□ -0.4
CACNA1A-219ENST00000635917 DLG1Q12959 904 aa12.58□□□□□ -0.4
CACNA1A-219ENST00000635917 CDH18Q13634 790 aa12.58□□□□□ -0.4
CACNA1A-219ENST00000635917 USP10Q14694 798 aaKnown RBP12.58□□□□□ -0.4
CACNA1A-219ENST00000635917 PTPRCAPQ14761 206 aa12.58□□□□□ -0.4
CACNA1A-219ENST00000635917 SLC5A9Q2M3M2 681 aa12.58□□□□□ -0.4
CACNA1A-219ENST00000635917 MPPE1Q53F39 396 aa12.58□□□□□ -0.4
CACNA1A-219ENST00000635917 RBM20Q5T481 1227 aaKnown RBP12.58□□□□□ -0.4
CACNA1A-219ENST00000635917 ZCCHC23Q6ZST2 131 aa12.58□□□□□ -0.4
CACNA1A-219ENST00000635917 RNF135Q8IUD6 432 aa12.58□□□□□ -0.4
CACNA1A-219ENST00000635917 SLC41A1Q8IVJ1 513 aa12.58□□□□□ -0.4
CACNA1A-219ENST00000635917 C10orf107Q8IVU9 208 aa12.58□□□□□ -0.4
CACNA1A-219ENST00000635917 MFN1Q8IWA4 741 aa12.58□□□□□ -0.4
CACNA1A-219ENST00000635917 CMTM8Q8IZV2 173 aa12.58□□□□□ -0.4
CACNA1A-219ENST00000635917 GBP7Q8N8V2 638 aaPredicted RBP12.58□□□□□ -0.4
CACNA1A-219ENST00000635917 OR13C4Q8NGS5 318 aa12.58□□□□□ -0.4
CACNA1A-219ENST00000635917 BLOC1S5Q8TDH9 187 aa12.58□□□□□ -0.4
CACNA1A-219ENST00000635917 STYXQ8WUJ0 223 aa12.58□□□□□ -0.4
CACNA1A-219ENST00000635917 DNAJC1Q96KC8 554 aaKnown RBP12.58□□□□□ -0.4
CACNA1A-219ENST00000635917 OMDQ99983 421 aa12.58□□□□□ -0.4
CACNA1A-219ENST00000635917 TRIM55Q9BYV6 548 aa12.58□□□□□ -0.4
CACNA1A-219ENST00000635917 SMG9Q9H0W8 520 aaKnown RBP12.58□□□□□ -0.4
CACNA1A-219ENST00000635917 ACTR5Q9H9F9 607 aaPredicted RBP12.58□□□□□ -0.4
CACNA1A-219ENST00000635917 SCUBE2Q9NQ36 999 aa12.58□□□□□ -0.4
CACNA1A-219ENST00000635917 MAN1C1Q9NR34 630 aa12.58□□□□□ -0.4
CACNA1A-219ENST00000635917 FBXO6Q9NRD1 293 aaPredicted RBP12.58□□□□□ -0.4
CACNA1A-219ENST00000635917 THAP1Q9NVV9 213 aa12.58□□□□□ -0.4
CACNA1A-219ENST00000635917 ANKRD6Q9Y2G4 727 aa12.58□□□□□ -0.4
CACNA1A-219ENST00000635917 SH3BP1Q9Y3L3 701 aa12.58□□□□□ -0.4
CACNA1A-219ENST00000635917 PCDHGC4Q9Y5F7 938 aa12.58□□□□□ -0.4
CACNA1A-219ENST00000635917 NUP210Q8TEM1 1887 aaPredicted RBP12.58□□□□□ -0.4
CACNA1A-219ENST00000635917 CXorf51AA0A1B0GTR3 108 aa12.58□□□□□ -0.4
CACNA1A-219ENST00000635917 CCDC195A0A1B0GUA6 201 aa12.58□□□□□ -0.4
CACNA1A-219ENST00000635917 TYW5A2RUC4 315 aaKnown RBP12.58□□□□□ -0.4
CACNA1A-219ENST00000635917 OR51F1A6NGY5 319 aa12.58□□□□□ -0.4
CACNA1A-219ENST00000635917 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.58□□□□□ -0.4
CACNA1A-219ENST00000635917 ANKRD66B4E2M5 251 aa12.58□□□□□ -0.4
CACNA1A-219ENST00000635917 ITM2AO43736 263 aa12.58□□□□□ -0.4
CACNA1A-219ENST00000635917 ZNF821O75541 412 aaPredicted RBP12.58□□□□□ -0.4
CACNA1A-219ENST00000635917 RHOP08100 348 aa12.58□□□□□ -0.4
CACNA1A-219ENST00000635917 TROVE2P10155 538 aaKnown RBP eCLIP12.58□□□□□ -0.4
CACNA1A-219ENST00000635917 MYOGP15173 224 aa12.58□□□□□ -0.4
CACNA1A-219ENST00000635917 EPCAMP16422 314 aa12.58□□□□□ -0.4
CACNA1A-219ENST00000635917 POU4F1Q01851 419 aa12.58□□□□□ -0.4
CACNA1A-219ENST00000635917 LMAN2Q12907 356 aa12.58□□□□□ -0.4
CACNA1A-219ENST00000635917 LAMB3Q13751 1172 aa12.58□□□□□ -0.4
CACNA1A-219ENST00000635917 RALGPS1Q5JS13 557 aa12.58□□□□□ -0.4
CACNA1A-219ENST00000635917 PRSS36Q5K4E3 855 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms