RNA–Protein interactions for RNA: ENST00000635562.1

PSPC1-208, Transcript of paraspeckle component 1, humanhuman

TSL 3

Gene PSPC1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-208ENST00000635562 CDH26Q8IXH8 852 aa3.05□□□□□ -1.92
PSPC1-208ENST00000635562 TAGAPQ8N103 731 aa3.05□□□□□ -1.92
PSPC1-208ENST00000635562 SCML4Q8N228 414 aa3.05□□□□□ -1.92
PSPC1-208ENST00000635562 FBXW8Q8N3Y1 598 aa3.05□□□□□ -1.92
PSPC1-208ENST00000635562 TDRD5Q8NAT2 981 aaKnown RBP3.05□□□□□ -1.92
PSPC1-208ENST00000635562 LILRB4Q8NHJ6 448 aa3.05□□□□□ -1.92
PSPC1-208ENST00000635562 KIF18AQ8NI77 898 aa3.05□□□□□ -1.92
PSPC1-208ENST00000635562 THAP4Q8WY91 577 aa3.05□□□□□ -1.92
PSPC1-208ENST00000635562 RAPGEF5Q92565 580 aa3.05□□□□□ -1.92
PSPC1-208ENST00000635562 TBC1D5Q92609 795 aa3.05□□□□□ -1.92
PSPC1-208ENST00000635562 RSC1A1Q92681 617 aa3.05□□□□□ -1.92
PSPC1-208ENST00000635562 GLG1Q92896 1179 aa3.05□□□□□ -1.92
PSPC1-208ENST00000635562 RFKQ969G6 155 aa3.05□□□□□ -1.92
PSPC1-208ENST00000635562 CTHRC1Q96CG8 243 aa3.05□□□□□ -1.92
PSPC1-208ENST00000635562 C19orf60Q96EN9 201 aa3.05□□□□□ -1.92
PSPC1-208ENST00000635562 PTCD3Q96EY7 689 aaKnown RBP3.05□□□□□ -1.92
PSPC1-208ENST00000635562 PGBD1Q96JS3 809 aa3.05□□□□□ -1.92
PSPC1-208ENST00000635562 ZBTB45Q96K62 511 aaPredicted RBP3.05□□□□□ -1.92
PSPC1-208ENST00000635562 PBKQ96KB5 322 aa3.05□□□□□ -1.92
PSPC1-208ENST00000635562 TWNKQ96RR1 684 aa3.05□□□□□ -1.92
PSPC1-208ENST00000635562 SH3GL2Q99962 352 aa3.05□□□□□ -1.92
PSPC1-208ENST00000635562 BCL7BQ9BQE9 202 aa3.05□□□□□ -1.92
PSPC1-208ENST00000635562 NUDT22Q9BRQ3 303 aa3.05□□□□□ -1.92
PSPC1-208ENST00000635562 UQCC2Q9BRT2 126 aa3.05□□□□□ -1.92
PSPC1-208ENST00000635562 C17orf80Q9BSJ5 609 aa3.05□□□□□ -1.92
PSPC1-208ENST00000635562 DUSP26Q9BV47 211 aa3.05□□□□□ -1.92
PSPC1-208ENST00000635562 TPSD1Q9BZJ3 242 aa3.05□□□□□ -1.92
PSPC1-208ENST00000635562 NYXQ9GZU5 481 aa3.05□□□□□ -1.92
PSPC1-208ENST00000635562 VCX3BQ9H321 246 aa3.05□□□□□ -1.92
PSPC1-208ENST00000635562 TP63Q9H3D4 680 aaPredicted RBP3.05□□□□□ -1.92
PSPC1-208ENST00000635562 SMARCAD1Q9H4L7 1026 aa3.05□□□□□ -1.92
PSPC1-208ENST00000635562 OPA3Q9H6K4 179 aa3.05□□□□□ -1.92
PSPC1-208ENST00000635562 C17orf75Q9HAS0 396 aa3.05□□□□□ -1.92
PSPC1-208ENST00000635562 HPS4Q9NQG7 708 aa3.05□□□□□ -1.92
PSPC1-208ENST00000635562 SNX15Q9NRS6 342 aa3.05□□□□□ -1.92
PSPC1-208ENST00000635562 KLC4Q9NSK0 619 aa3.05□□□□□ -1.92
PSPC1-208ENST00000635562 SELENONQ9NZV5 590 aa3.05□□□□□ -1.92
PSPC1-208ENST00000635562 LPAR3Q9UBY5 353 aa3.05□□□□□ -1.92
PSPC1-208ENST00000635562 MALT1Q9UDY8 824 aa3.05□□□□□ -1.92
PSPC1-208ENST00000635562 APPL1Q9UKG1 709 aa3.05□□□□□ -1.92
PSPC1-208ENST00000635562 TLK1Q9UKI8 766 aa3.05□□□□□ -1.92
PSPC1-208ENST00000635562 RCOR1Q9UKL0 485 aa3.05□□□□□ -1.92
PSPC1-208ENST00000635562 PSME2Q9UL46 239 aa3.05□□□□□ -1.92
PSPC1-208ENST00000635562 TBX20Q9UMR3 447 aa3.05□□□□□ -1.92
PSPC1-208ENST00000635562 SH2B3Q9UQQ2 575 aa3.05□□□□□ -1.92
PSPC1-208ENST00000635562 LIPT1Q9Y234 373 aa3.05□□□□□ -1.92
PSPC1-208ENST00000635562 WDR37Q9Y2I8 494 aa3.05□□□□□ -1.92
PSPC1-208ENST00000635562 KLHL20Q9Y2M5 609 aa3.05□□□□□ -1.92
PSPC1-208ENST00000635562 PSAT1Q9Y617 370 aa3.05□□□□□ -1.92
PSPC1-208ENST00000635562 FAM169AQ9Y6X4 670 aa3.05□□□□□ -1.92
PSPC1-208ENST00000635562 KIAA1217Q5T5P2 1943 aa3.05□□□□□ -1.92
PSPC1-208ENST00000635562 KIF7Q2M1P5 1343 aa3.04□□□□□ -1.92
PSPC1-208ENST00000635562 EVC2Q86UK5 1308 aa3.04□□□□□ -1.92
PSPC1-208ENST00000635562 LOC100653049A0A140TA62 436 aa3.04□□□□□ -1.92
PSPC1-208ENST00000635562 GXYLT2A0PJZ3 443 aa3.04□□□□□ -1.92
PSPC1-208ENST00000635562 A4D1N5 150 aa3.04□□□□□ -1.92
PSPC1-208ENST00000635562 NDUFS8O00217 210 aa3.04□□□□□ -1.92
PSPC1-208ENST00000635562 O00370 1275 aa3.04□□□□□ -1.92
PSPC1-208ENST00000635562 MPPED1O15442 326 aa3.04□□□□□ -1.92
PSPC1-208ENST00000635562 SMAD6O43541 496 aaKnown RBP3.04□□□□□ -1.92
PSPC1-208ENST00000635562 RGS10O43665 173 aa3.04□□□□□ -1.92
PSPC1-208ENST00000635562 ASNA1O43681 348 aa3.04□□□□□ -1.92
PSPC1-208ENST00000635562 RANBP6O60518 1105 aaKnown RBP3.04□□□□□ -1.92
PSPC1-208ENST00000635562 KRT34O76011 436 aa3.04□□□□□ -1.92
PSPC1-208ENST00000635562 METTL18O95568 372 aa3.04□□□□□ -1.92
PSPC1-208ENST00000635562 CLEC3BP05452 202 aa3.04□□□□□ -1.92
PSPC1-208ENST00000635562 ANXA6P08133 673 aa3.04□□□□□ -1.92
PSPC1-208ENST00000635562 PRR35P0CG20 571 aa3.04□□□□□ -1.92
PSPC1-208ENST00000635562 ITGAMP11215 1152 aa3.04□□□□□ -1.92
PSPC1-208ENST00000635562 ZNF3P17036 446 aa3.04□□□□□ -1.92
PSPC1-208ENST00000635562 TRIM21P19474 475 aaKnown RBP3.04□□□□□ -1.92
PSPC1-208ENST00000635562 ITPKBP27987 946 aa3.04□□□□□ -1.92
PSPC1-208ENST00000635562 ABCD3P28288 659 aa3.04□□□□□ -1.92
PSPC1-208ENST00000635562 RBL1P28749 1068 aa3.04□□□□□ -1.92
PSPC1-208ENST00000635562 TM4SF1P30408 202 aa3.04□□□□□ -1.92
PSPC1-208ENST00000635562 NTSR1P30989 418 aa3.04□□□□□ -1.92
PSPC1-208ENST00000635562 CSTF2P33240 577 aaKnown RBP eCLIP3.04□□□□□ -1.92
PSPC1-208ENST00000635562 NF2P35240 595 aa3.04□□□□□ -1.92
PSPC1-208ENST00000635562 LIPAP38571 399 aa3.04□□□□□ -1.92
PSPC1-208ENST00000635562 PSMB10P40306 273 aa3.04□□□□□ -1.92
PSPC1-208ENST00000635562 FOLR3P41439 243 aa3.04□□□□□ -1.92
PSPC1-208ENST00000635562 NT5C2P49902 561 aa3.04□□□□□ -1.92
PSPC1-208ENST00000635562 GATMP50440 423 aa3.04□□□□□ -1.92
PSPC1-208ENST00000635562 GBX2P52951 348 aaPredicted RBP3.04□□□□□ -1.92
PSPC1-208ENST00000635562 HDAC4P56524 1084 aa3.04□□□□□ -1.92
PSPC1-208ENST00000635562 YWHAZP63104 245 aaKnown RBP3.04□□□□□ -1.92
PSPC1-208ENST00000635562 TFAP4Q01664 338 aa3.04□□□□□ -1.92
PSPC1-208ENST00000635562 SPAG1Q07617 926 aa3.04□□□□□ -1.92
PSPC1-208ENST00000635562 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.04□□□□□ -1.92
PSPC1-208ENST00000635562 GPS1Q13098 491 aa3.04□□□□□ -1.92
PSPC1-208ENST00000635562 CHIT1Q13231 466 aa3.04□□□□□ -1.92
PSPC1-208ENST00000635562 SLC12A1Q13621 1099 aa3.04□□□□□ -1.92
PSPC1-208ENST00000635562 ITGA7Q13683 1181 aa3.04□□□□□ -1.92
PSPC1-208ENST00000635562 ACOX1Q15067 660 aa3.04□□□□□ -1.92
PSPC1-208ENST00000635562 PFKFB3Q16875 520 aaPredicted RBP3.04□□□□□ -1.92
PSPC1-208ENST00000635562 FUT11Q495W5 492 aa3.04□□□□□ -1.92
PSPC1-208ENST00000635562 ZNF805Q5CZA5 627 aa3.04□□□□□ -1.92
PSPC1-208ENST00000635562 GLRA4Q5JXX5 417 aa3.04□□□□□ -1.92
PSPC1-208ENST00000635562 MPP7Q5T2T1 576 aa3.04□□□□□ -1.92
PSPC1-208ENST00000635562 ZNF618Q5T7W0 954 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms