RNA–Protein interactions for RNA: ENST00000631057.2

GPC3-204, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 1,581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-204ENST00000631057 FESP07332 822 aa8.12□□□□□ -1.11
GPC3-204ENST00000631057 HSPA1AP0DMV8 641 aaKnown RBP8.12□□□□□ -1.11
GPC3-204ENST00000631057 HSPA1BP0DMV9 641 aaKnown RBP8.12□□□□□ -1.11
GPC3-204ENST00000631057 PIM1P11309 404 aaPredicted RBP8.12□□□□□ -1.11
GPC3-204ENST00000631057 ME2P23368 584 aa8.12□□□□□ -1.11
GPC3-204ENST00000631057 SLC26A3P40879 764 aa8.12□□□□□ -1.11
GPC3-204ENST00000631057 CCNHP51946 323 aaPredicted RBP8.12□□□□□ -1.11
GPC3-204ENST00000631057 THOP1P52888 689 aa8.12□□□□□ -1.11
GPC3-204ENST00000631057 TBX4P57082 545 aa8.12□□□□□ -1.11
GPC3-204ENST00000631057 TNK2Q07912 1038 aa8.12□□□□□ -1.11
GPC3-204ENST00000631057 LAMB3Q13751 1172 aa8.12□□□□□ -1.11
GPC3-204ENST00000631057 CSHL1Q14406 222 aa8.12□□□□□ -1.11
GPC3-204ENST00000631057 PCSK7Q16549 785 aa8.12□□□□□ -1.11
GPC3-204ENST00000631057 NFE2Q16621 373 aaPredicted RBP8.12□□□□□ -1.11
GPC3-204ENST00000631057 ZNF423Q2M1K9 1284 aa8.12□□□□□ -1.11
GPC3-204ENST00000631057 GRAMD1BQ3KR37 738 aa8.12□□□□□ -1.11
GPC3-204ENST00000631057 SFT2D3Q587I9 215 aa8.12□□□□□ -1.11
GPC3-204ENST00000631057 PPM1LQ5SGD2 360 aa8.12□□□□□ -1.11
GPC3-204ENST00000631057 RARS2Q5T160 578 aaKnown RBP8.12□□□□□ -1.11
GPC3-204ENST00000631057 RBM20Q5T481 1227 aaKnown RBP8.12□□□□□ -1.11
GPC3-204ENST00000631057 ACBD5Q5T8D3 534 aaPredicted RBP8.12□□□□□ -1.11
GPC3-204ENST00000631057 PIK3R6Q5UE93 754 aa8.12□□□□□ -1.11
GPC3-204ENST00000631057 LPCAT4Q643R3 524 aa8.12□□□□□ -1.11
GPC3-204ENST00000631057 CNSTQ6PJW8 725 aa8.12□□□□□ -1.11
GPC3-204ENST00000631057 ZNF598Q86UK7 904 aaKnown RBP8.12□□□□□ -1.11
GPC3-204ENST00000631057 SCN4BQ8IWT1 228 aa8.12□□□□□ -1.11
GPC3-204ENST00000631057 NUP93Q8N1F7 819 aa8.12□□□□□ -1.11
GPC3-204ENST00000631057 ATP6V0D2Q8N8Y2 350 aa8.12□□□□□ -1.11
GPC3-204ENST00000631057 ICA1LQ8NDH6 482 aa8.12□□□□□ -1.11
GPC3-204ENST00000631057 SLC39A13Q96H72 371 aa8.12□□□□□ -1.11
GPC3-204ENST00000631057 FUBP3Q96I24 572 aaKnown RBP eCLIP8.12□□□□□ -1.112e-6■□□□□ 9.9
GPC3-204ENST00000631057 C8orf48Q96LL4 319 aa8.12□□□□□ -1.11
GPC3-204ENST00000631057 TRMOQ9BU70 441 aa8.12□□□□□ -1.11
GPC3-204ENST00000631057 ZYG11BQ9C0D3 744 aa8.12□□□□□ -1.11
GPC3-204ENST00000631057 ZCWPW1Q9H0M4 648 aa8.12□□□□□ -1.11
GPC3-204ENST00000631057 ATXN3LQ9H3M9 355 aa8.12□□□□□ -1.11
GPC3-204ENST00000631057 MFSD1Q9H3U5 465 aa8.12□□□□□ -1.11
GPC3-204ENST00000631057 Q9H521 79 aa8.12□□□□□ -1.11
GPC3-204ENST00000631057 NOL6Q9H6R4 1146 aaKnown RBP8.12□□□□□ -1.11
GPC3-204ENST00000631057 WDR41Q9HAD4 459 aa8.12□□□□□ -1.11
GPC3-204ENST00000631057 SP110Q9HB58 689 aa8.12□□□□□ -1.11
GPC3-204ENST00000631057 NMUR1Q9HB89 426 aa8.12□□□□□ -1.11
GPC3-204ENST00000631057 ZFYVE28Q9HCC9 887 aa8.12□□□□□ -1.11
GPC3-204ENST00000631057 NT5MQ9NPB1 228 aa8.12□□□□□ -1.11
GPC3-204ENST00000631057 PRDM5Q9NQX1 630 aaPredicted RBP8.12□□□□□ -1.11
GPC3-204ENST00000631057 ACSS2Q9NR19 701 aa8.12□□□□□ -1.11
GPC3-204ENST00000631057 TMEM248Q9NWD8 314 aa8.12□□□□□ -1.11
GPC3-204ENST00000631057 ABI2Q9NYB9 513 aaPredicted RBP8.12□□□□□ -1.11
GPC3-204ENST00000631057 UTP6Q9NYH9 597 aaKnown RBP8.12□□□□□ -1.11
GPC3-204ENST00000631057 HACD3Q9P035 362 aa8.12□□□□□ -1.11
GPC3-204ENST00000631057 DTNAQ9Y4J8 743 aa8.12□□□□□ -1.11
GPC3-204ENST00000631057 COPG1Q9Y678 874 aaKnown RBP8.12□□□□□ -1.11
GPC3-204ENST00000631057 TLL2Q9Y6L7 1015 aa8.12□□□□□ -1.11
GPC3-204ENST00000631057 TMEM189-UBE2V1I3L0A0 370 aa8.11□□□□□ -1.11
GPC3-204ENST00000631057 RNASEH1O60930 286 aaKnown RBP8.11□□□□□ -1.11
GPC3-204ENST00000631057 OAZ2O95190 189 aa8.11□□□□□ -1.11
GPC3-204ENST00000631057 PEX11BO96011 259 aa8.11□□□□□ -1.11
GPC3-204ENST00000631057 PENKP01210 267 aaPredicted RBP8.11□□□□□ -1.11
GPC3-204ENST00000631057 ITGB1P05556 798 aa8.11□□□□□ -1.11
GPC3-204ENST00000631057 SLC10A3P09131 477 aa8.11□□□□□ -1.11
GPC3-204ENST00000631057 ENO3P13929 434 aaPredicted RBP8.11□□□□□ -1.11
GPC3-204ENST00000631057 HOXB8P17481 243 aaPredicted RBP8.11□□□□□ -1.11
GPC3-204ENST00000631057 XRCC1P18887 633 aaPredicted RBP8.11□□□□□ -1.11
GPC3-204ENST00000631057 PEX19P40855 299 aa8.11□□□□□ -1.11
GPC3-204ENST00000631057 CD86P42081 329 aa8.11□□□□□ -1.11
GPC3-204ENST00000631057 MAGEA11P43364 429 aa8.11□□□□□ -1.11
GPC3-204ENST00000631057 ALDH1A3P47895 512 aa8.11□□□□□ -1.11
GPC3-204ENST00000631057 PGFP49763 221 aa8.11□□□□□ -1.11
GPC3-204ENST00000631057 CLCN2P51788 898 aa8.11□□□□□ -1.11
GPC3-204ENST00000631057 PGGT1BP53609 377 aa8.11□□□□□ -1.11
GPC3-204ENST00000631057 AQP4P55087 323 aa8.11□□□□□ -1.11
GPC3-204ENST00000631057 INHBCP55103 352 aa8.11□□□□□ -1.11
GPC3-204ENST00000631057 SULT2A1Q06520 285 aa8.11□□□□□ -1.11
GPC3-204ENST00000631057 ITKQ08881 620 aa8.11□□□□□ -1.11
GPC3-204ENST00000631057 GALNT1Q10472 559 aaPredicted RBP8.11□□□□□ -1.11
GPC3-204ENST00000631057 SREBF2Q12772 1141 aa8.11□□□□□ -1.11
GPC3-204ENST00000631057 STX5Q13190 355 aa8.11□□□□□ -1.11
GPC3-204ENST00000631057 ADGRE1Q14246 886 aa8.11□□□□□ -1.11
GPC3-204ENST00000631057 SQLEQ14534 574 aa8.11□□□□□ -1.11
GPC3-204ENST00000631057 ACAP2Q15057 778 aa8.11□□□□□ -1.11
GPC3-204ENST00000631057 LRRC36Q1X8D7 754 aa8.11□□□□□ -1.11
GPC3-204ENST00000631057 MMEL1Q495T6 779 aa8.11□□□□□ -1.11
GPC3-204ENST00000631057 FAM26DQ5JW98 314 aa8.11□□□□□ -1.11
GPC3-204ENST00000631057 HECTD2Q5U5R9 776 aa8.11□□□□□ -1.11
GPC3-204ENST00000631057 MARC1Q5VT66 337 aa8.11□□□□□ -1.11
GPC3-204ENST00000631057 RNF220Q5VTB9 566 aa8.11□□□□□ -1.11
GPC3-204ENST00000631057 TMEM198Q66K66 360 aa8.11□□□□□ -1.11
GPC3-204ENST00000631057 GLB1LQ6UWU2 654 aa8.11□□□□□ -1.11
GPC3-204ENST00000631057 TMEM92Q6UXU6 159 aa8.11□□□□□ -1.11
GPC3-204ENST00000631057 CHSY3Q70JA7 882 aa8.11□□□□□ -1.11
GPC3-204ENST00000631057 KDELC2Q7Z4H8 507 aa8.11□□□□□ -1.11
GPC3-204ENST00000631057 CILP2Q8IUL8 1156 aa8.11□□□□□ -1.11
GPC3-204ENST00000631057 ZNF683Q8IZ20 524 aa8.11□□□□□ -1.11
GPC3-204ENST00000631057 PELI3Q8N2H9 469 aa8.11□□□□□ -1.11
GPC3-204ENST00000631057 TEX26Q8N6G2 289 aa8.11□□□□□ -1.11
GPC3-204ENST00000631057 MOCOSQ96EN8 888 aa8.11□□□□□ -1.11
GPC3-204ENST00000631057 SGF29Q96ES7 293 aa8.11□□□□□ -1.11
GPC3-204ENST00000631057 HMCESQ96FZ2 354 aa8.11□□□□□ -1.11
GPC3-204ENST00000631057 LRGUKQ96M69 825 aa8.11□□□□□ -1.11
GPC3-204ENST00000631057 TUBGCP5Q96RT8 1024 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms