RNA–Protein interactions for RNA: ENST00000629380.2

SYNGAP1-208, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SYNGAP1, Length 9,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-208ENST00000629380 PTPRNQ16849 979 aa13.25□□□□□ -0.29
SYNGAP1-208ENST00000629380 FAM131BQ86XD5 332 aa13.25□□□□□ -0.29
SYNGAP1-208ENST00000629380 SYT15Q9BQS2 421 aa13.25□□□□□ -0.29
SYNGAP1-208ENST00000629380 ETAA1Q9NY74 926 aa13.25□□□□□ -0.29
SYNGAP1-208ENST00000629380 DMTF1Q9Y222 760 aa13.25□□□□□ -0.29
SYNGAP1-208ENST00000629380 IFT172Q9UG01 1749 aa13.25□□□□□ -0.29
SYNGAP1-208ENST00000629380 FOXN3O00409 490 aaPredicted RBP13.25□□□□□ -0.29
SYNGAP1-208ENST00000629380 CYB5AP00167 134 aa13.25□□□□□ -0.29
SYNGAP1-208ENST00000629380 AMD1P17707 334 aa13.25□□□□□ -0.29
SYNGAP1-208ENST00000629380 TUFMP49411 452 aaKnown RBP13.25□□□□□ -0.29
SYNGAP1-208ENST00000629380 LGI2Q8N0V4 545 aa13.25□□□□□ -0.29
SYNGAP1-208ENST00000629380 RXFP2Q8WXD0 754 aa13.25□□□□□ -0.29
SYNGAP1-208ENST00000629380 AKAP1Q92667 903 aaKnown RBP eCLIP13.25□□□□□ -0.29
SYNGAP1-208ENST00000629380 B3GALT6Q96L58 329 aa13.25□□□□□ -0.29
SYNGAP1-208ENST00000629380 ZSCAN5CA6NGD5 496 aaPredicted RBP13.25□□□□□ -0.29
SYNGAP1-208ENST00000629380 TOP3BO95985 862 aaKnown RBP13.25□□□□□ -0.29
SYNGAP1-208ENST00000629380 GSTT1P30711 240 aa13.25□□□□□ -0.29
SYNGAP1-208ENST00000629380 NPTX2P47972 431 aa13.25□□□□□ -0.29
SYNGAP1-208ENST00000629380 TMC3Q7Z5M5 1100 aa13.25□□□□□ -0.29
SYNGAP1-208ENST00000629380 SNIP1Q8TAD8 396 aaKnown RBP13.25□□□□□ -0.29
SYNGAP1-208ENST00000629380 SELENOMQ8WWX9 145 aa13.25□□□□□ -0.29
SYNGAP1-208ENST00000629380 SH2D3AQ9BRG2 576 aa13.25□□□□□ -0.29
SYNGAP1-208ENST00000629380 MED28Q9H204 178 aa13.25□□□□□ -0.29
SYNGAP1-208ENST00000629380 SEMA6AQ9H2E6 1030 aa13.25□□□□□ -0.29
SYNGAP1-208ENST00000629380 CRISPLD1Q9H336 500 aa13.25□□□□□ -0.29
SYNGAP1-208ENST00000629380 SAMHD1Q9Y3Z3 626 aaKnown RBP13.25□□□□□ -0.29
SYNGAP1-208ENST00000629380 PCDHA11Q9Y5I1 949 aa13.25□□□□□ -0.29
SYNGAP1-208ENST00000629380 DCXO43602 365 aa13.25□□□□□ -0.29
SYNGAP1-208ENST00000629380 ITIH1P19827 911 aa13.25□□□□□ -0.29
SYNGAP1-208ENST00000629380 UBA1P22314 1058 aaKnown RBP13.25□□□□□ -0.29
SYNGAP1-208ENST00000629380 METTL7BQ6UX53 244 aa13.25□□□□□ -0.29
SYNGAP1-208ENST00000629380 TMC7Q7Z402 723 aa13.25□□□□□ -0.29
SYNGAP1-208ENST00000629380 APOL2Q9BQE5 337 aa13.25□□□□□ -0.29
SYNGAP1-208ENST00000629380 ABCB10Q9NRK6 738 aa13.25□□□□□ -0.29
SYNGAP1-208ENST00000629380 TRMT13Q9NUP7 481 aaKnown RBP13.25□□□□□ -0.29
SYNGAP1-208ENST00000629380 ZNF510Q9Y2H8 683 aa13.25□□□□□ -0.29
SYNGAP1-208ENST00000629380 MPZL2O60487 215 aa13.25□□□□□ -0.29
SYNGAP1-208ENST00000629380 UGT2B11O75310 529 aa13.25□□□□□ -0.29
SYNGAP1-208ENST00000629380 NR4A1P22736 598 aa13.25□□□□□ -0.29
SYNGAP1-208ENST00000629380 ELK3P41970 407 aa13.25□□□□□ -0.29
SYNGAP1-208ENST00000629380 ATP13A4Q4VNC1 1196 aa13.25□□□□□ -0.29
SYNGAP1-208ENST00000629380 OR4A15Q8NGL6 344 aa13.25□□□□□ -0.29
SYNGAP1-208ENST00000629380 PRMT6Q96LA8 375 aaPredicted RBP13.25□□□□□ -0.29
SYNGAP1-208ENST00000629380 TRPS1Q9UHF7 1281 aa13.25□□□□□ -0.29
SYNGAP1-208ENST00000629380 FAM205AQ6ZU69 1335 aa13.25□□□□□ -0.29
SYNGAP1-208ENST00000629380 ARHGEF33A8MVX0 844 aa13.25□□□□□ -0.29
SYNGAP1-208ENST00000629380 OR10H3O60404 316 aa13.25□□□□□ -0.29
SYNGAP1-208ENST00000629380 REM1O75628 298 aa13.25□□□□□ -0.29
SYNGAP1-208ENST00000629380 ENDOD1O94919 500 aa13.25□□□□□ -0.29
SYNGAP1-208ENST00000629380 PABPC1LQ4VXU2 614 aaKnown RBP13.25□□□□□ -0.29
SYNGAP1-208ENST00000629380 ZDHHC20Q5W0Z9 365 aa13.25□□□□□ -0.29
SYNGAP1-208ENST00000629380 OR10H5Q8NGA6 315 aa13.25□□□□□ -0.29
SYNGAP1-208ENST00000629380 KAT5Q92993 513 aa13.25□□□□□ -0.29
SYNGAP1-208ENST00000629380 RNF208Q9H0X6 261 aa13.25□□□□□ -0.29
SYNGAP1-208ENST00000629380 MTF2Q9Y483 593 aaPredicted RBP13.25□□□□□ -0.29
SYNGAP1-208ENST00000629380 C1QTNF3-AMACRE9PGA6 284 aa13.24□□□□□ -0.29
SYNGAP1-208ENST00000629380 DDNO94850 711 aaPredicted RBP13.24□□□□□ -0.29
SYNGAP1-208ENST00000629380 DLG4P78352 724 aa13.24□□□□□ -0.29
SYNGAP1-208ENST00000629380 CES5AQ6NT32 575 aa13.24□□□□□ -0.29
SYNGAP1-208ENST00000629380 DEF8Q6ZN54 512 aa13.24□□□□□ -0.29
SYNGAP1-208ENST00000629380 MCEMP1Q8IX19 187 aa13.24□□□□□ -0.29
SYNGAP1-208ENST00000629380 FSTL5Q8N475 847 aaPredicted RBP13.24□□□□□ -0.29
SYNGAP1-208ENST00000629380 CCDC115Q96NT0 180 aa13.24□□□□□ -0.29
SYNGAP1-208ENST00000629380 PPP1R3GB7ZBB8 358 aa13.24□□□□□ -0.29
SYNGAP1-208ENST00000629380 ADH1CP00326 375 aa13.24□□□□□ -0.29
SYNGAP1-208ENST00000629380 DHFRP00374 187 aa13.24□□□□□ -0.29
SYNGAP1-208ENST00000629380 SREBF1P36956 1147 aa13.24□□□□□ -0.29
SYNGAP1-208ENST00000629380 ZCCHC12Q6PEW1 402 aa13.24□□□□□ -0.29
SYNGAP1-208ENST00000629380 GCNT7Q6ZNI0 430 aa13.24□□□□□ -0.29
SYNGAP1-208ENST00000629380 GRIN3AQ8TCU5 1115 aa13.24□□□□□ -0.29
SYNGAP1-208ENST00000629380 HEXDCQ8WVB3 486 aa13.24□□□□□ -0.29
SYNGAP1-208ENST00000629380 EFHD2Q96C19 240 aaPredicted RBP13.24□□□□□ -0.29
SYNGAP1-208ENST00000629380 MARCH2Q9P0N8 246 aa13.24□□□□□ -0.29
SYNGAP1-208ENST00000629380 PSMD11O00231 422 aa13.24□□□□□ -0.29
SYNGAP1-208ENST00000629380 KPNA3O00505 521 aaPredicted RBP13.24□□□□□ -0.29
SYNGAP1-208ENST00000629380 ULK1O75385 1050 aa13.24□□□□□ -0.29
SYNGAP1-208ENST00000629380 SULT2A1Q06520 285 aa13.24□□□□□ -0.29
SYNGAP1-208ENST00000629380 PRRG4Q9BZD6 226 aa13.24□□□□□ -0.29
SYNGAP1-208ENST00000629380 DNMT3LQ9UJW3 386 aa13.24□□□□□ -0.29
SYNGAP1-208ENST00000629380 BAIAP2Q9UQB8 552 aa13.24□□□□□ -0.29
SYNGAP1-208ENST00000629380 ATXN2Q99700 1313 aaKnown RBP13.24□□□□□ -0.29
SYNGAP1-208ENST00000629380 PQBP1O60828 265 aaKnown RBP13.24□□□□□ -0.29
SYNGAP1-208ENST00000629380 CASP5P51878 434 aa13.24□□□□□ -0.29
SYNGAP1-208ENST00000629380 LCN1P1Q5VSP4 162 aa13.24□□□□□ -0.29
SYNGAP1-208ENST00000629380 SNX20Q7Z614 316 aa13.24□□□□□ -0.29
SYNGAP1-208ENST00000629380 ELMO1Q92556 727 aa13.24□□□□□ -0.29
SYNGAP1-208ENST00000629380 C12orf66Q96MD2 445 aa13.24□□□□□ -0.29
SYNGAP1-208ENST00000629380 ZNHIT2Q9UHR6 403 aa13.24□□□□□ -0.29
SYNGAP1-208ENST00000629380 SGPL1O95470 568 aa13.24□□□□□ -0.29
SYNGAP1-208ENST00000629380 MAP1SQ66K74 1059 aaPredicted RBP13.24□□□□□ -0.29
SYNGAP1-208ENST00000629380 LRRC69Q6ZNQ3 347 aa13.24□□□□□ -0.29
SYNGAP1-208ENST00000629380 NYAP1Q6ZVC0 841 aa13.24□□□□□ -0.29
SYNGAP1-208ENST00000629380 CYP4X1Q8N118 509 aa13.24□□□□□ -0.29
SYNGAP1-208ENST00000629380 CDCA5Q96FF9 252 aa13.24□□□□□ -0.29
SYNGAP1-208ENST00000629380 RIPK2O43353 540 aa13.24□□□□□ -0.29
SYNGAP1-208ENST00000629380 KCNA5P22460 613 aa13.24□□□□□ -0.29
SYNGAP1-208ENST00000629380 AKR1D1P51857 326 aa13.24□□□□□ -0.29
SYNGAP1-208ENST00000629380 THRBP10828 461 aa13.24□□□□□ -0.29
SYNGAP1-208ENST00000629380 MRPS22P82650 360 aaKnown RBP13.24□□□□□ -0.29
SYNGAP1-208ENST00000629380 WDR59Q6PJI9 974 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms