RNA–Protein interactions for RNA: ENST00000628962.1

VPS8-228, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5 BASIC

Gene VPS8, Length 207 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-228ENST00000628962 ROR1Q01973 937 aa3.39□□□□□ -1.87
VPS8-228ENST00000628962 CDK18Q07002 472 aa3.39□□□□□ -1.87
VPS8-228ENST00000628962 GOLGA8DPQ0D2H9 430 aa3.39□□□□□ -1.87
VPS8-228ENST00000628962 EPS8Q12929 822 aa3.39□□□□□ -1.87
VPS8-228ENST00000628962 STK4Q13043 487 aa3.39□□□□□ -1.87
VPS8-228ENST00000628962 NFATC4Q14934 902 aa3.39□□□□□ -1.87
VPS8-228ENST00000628962 MFSD13AQ14CX5 517 aa3.39□□□□□ -1.87
VPS8-228ENST00000628962 MED22Q15528 200 aa3.39□□□□□ -1.87
VPS8-228ENST00000628962 TMEM266Q2M3C6 531 aa3.39□□□□□ -1.87
VPS8-228ENST00000628962 CYP20A1Q6UW02 462 aa3.39□□□□□ -1.87
VPS8-228ENST00000628962 KIAA1324Q6UXG2 1013 aaKnown RBP3.39□□□□□ -1.87
VPS8-228ENST00000628962 RBM23Q86U06 439 aaKnown RBP3.39□□□□□ -1.87
VPS8-228ENST00000628962 CCDC105Q8IYK2 499 aa3.39□□□□□ -1.87
VPS8-228ENST00000628962 FBXL14Q8N1E6 418 aa3.39□□□□□ -1.87
VPS8-228ENST00000628962 C12orf76Q8N812 135 aaPredicted RBP3.39□□□□□ -1.87
VPS8-228ENST00000628962 OR52L2PQ8NGH6 319 aa3.39□□□□□ -1.87
VPS8-228ENST00000628962 BCAS4Q8TDM0 211 aa3.39□□□□□ -1.87
VPS8-228ENST00000628962 KLHL29Q96CT2 875 aa3.39□□□□□ -1.87
VPS8-228ENST00000628962 HIC2Q96JB3 615 aa3.39□□□□□ -1.87
VPS8-228ENST00000628962 SPATA17Q96L03 361 aa3.39□□□□□ -1.87
VPS8-228ENST00000628962 NR1H4Q96RI1 486 aaPredicted RBP3.39□□□□□ -1.87
VPS8-228ENST00000628962 PIP5K1AQ99755 562 aa3.39□□□□□ -1.87
VPS8-228ENST00000628962 TUBB6Q9BUF5 446 aa3.39□□□□□ -1.87
VPS8-228ENST00000628962 CINPQ9BW66 212 aaPredicted RBP3.39□□□□□ -1.87
VPS8-228ENST00000628962 SCNM1Q9BWG6 230 aa3.39□□□□□ -1.87
VPS8-228ENST00000628962 ERVK-5Q9HDB9 667 aa3.39□□□□□ -1.87
VPS8-228ENST00000628962 ZCCHC17Q9NP64 241 aaKnown RBP3.39□□□□□ -1.87
VPS8-228ENST00000628962 PCDHB16Q9NRJ7 776 aa3.39□□□□□ -1.87
VPS8-228ENST00000628962 RXFP3Q9NSD7 469 aa3.39□□□□□ -1.87
VPS8-228ENST00000628962 DECR2Q9NUI1 292 aa3.39□□□□□ -1.87
VPS8-228ENST00000628962 THAP1Q9NVV9 213 aa3.39□□□□□ -1.87
VPS8-228ENST00000628962 MPP6Q9NZW5 540 aa3.39□□□□□ -1.87
VPS8-228ENST00000628962 SEMA5BQ9P283 1151 aa3.39□□□□□ -1.87
VPS8-228ENST00000628962 GIMAP2Q9UG22 337 aa3.39□□□□□ -1.87
VPS8-228ENST00000628962 CD207Q9UJ71 328 aa3.39□□□□□ -1.87
VPS8-228ENST00000628962 ZHX1Q9UKY1 873 aaPredicted RBP3.39□□□□□ -1.87
VPS8-228ENST00000628962 VPS4AQ9UN37 437 aa3.39□□□□□ -1.87
VPS8-228ENST00000628962 PCDHA7Q9UN72 937 aa3.39□□□□□ -1.87
VPS8-228ENST00000628962 PCDHA12Q9UN75 941 aa3.39□□□□□ -1.87
VPS8-228ENST00000628962 ZNF711Q9Y462 761 aa3.39□□□□□ -1.87
VPS8-228ENST00000628962 COPG1Q9Y678 874 aaKnown RBP3.39□□□□□ -1.87
VPS8-228ENST00000628962 KCNE2Q9Y6J6 123 aa3.39□□□□□ -1.87
VPS8-228ENST00000628962 DEPDC5O75140 1603 aa3.39□□□□□ -1.87
VPS8-228ENST00000628962 ABCA6Q8N139 1617 aa3.39□□□□□ -1.87
VPS8-228ENST00000628962 NUP153P49790 1475 aaKnown RBP3.39□□□□□ -1.87
VPS8-228ENST00000628962 GOLGA3Q08378 1498 aa3.39□□□□□ -1.87
VPS8-228ENST00000628962 MROH2AA6NES4 1674 aa3.39□□□□□ -1.87
VPS8-228ENST00000628962 RPGRIP1LQ68CZ1 1315 aa3.39□□□□□ -1.87
VPS8-228ENST00000628962 MAP3K1Q13233 1512 aa3.39□□□□□ -1.87
VPS8-228ENST00000628962 SUPT6HQ7KZ85 1726 aaKnown RBP3.39□□□□□ -1.87
VPS8-228ENST00000628962 TNRQ92752 1358 aa3.38□□□□□ -1.87
VPS8-228ENST00000628962 SYNMO15061 1565 aa3.38□□□□□ -1.87
VPS8-228ENST00000628962 NWD1Q149M9 1564 aa3.38□□□□□ -1.87
VPS8-228ENST00000628962 CFAP74Q9C0B2 1584 aa3.38□□□□□ -1.87
VPS8-228ENST00000628962 MIA2Q96PC5 1412 aa3.38□□□□□ -1.87
VPS8-228ENST00000628962 TMEM272A0A1B0GTI8 110 aa3.38□□□□□ -1.87
VPS8-228ENST00000628962 LIPT2A6NK58 231 aa3.38□□□□□ -1.87
VPS8-228ENST00000628962 C16orf96A6NNT2 1141 aa3.38□□□□□ -1.87
VPS8-228ENST00000628962 AGAP14A8MT82 685 aa3.38□□□□□ -1.87
VPS8-228ENST00000628962 MYO1GB0I1T2 1018 aa3.38□□□□□ -1.87
VPS8-228ENST00000628962 PER2O15055 1255 aa3.38□□□□□ -1.87
VPS8-228ENST00000628962 GRID2O43424 1007 aa3.38□□□□□ -1.87
VPS8-228ENST00000628962 CCNT1O60563 726 aaKnown RBP3.38□□□□□ -1.87
VPS8-228ENST00000628962 URODP06132 367 aa3.38□□□□□ -1.87
VPS8-228ENST00000628962 LYL1P12980 280 aa3.38□□□□□ -1.87
VPS8-228ENST00000628962 CYP4B1P13584 511 aa3.38□□□□□ -1.87
VPS8-228ENST00000628962 COX7A2P14406 83 aa3.38□□□□□ -1.87
VPS8-228ENST00000628962 GLULP15104 373 aa3.38□□□□□ -1.87
VPS8-228ENST00000628962 IL11P20809 199 aa3.38□□□□□ -1.87
VPS8-228ENST00000628962 MATN1P21941 496 aa3.38□□□□□ -1.87
VPS8-228ENST00000628962 TBXAS1P24557 533 aaPredicted RBP3.38□□□□□ -1.87
VPS8-228ENST00000628962 TM4SF1P30408 202 aa3.38□□□□□ -1.87
VPS8-228ENST00000628962 GCH1P30793 250 aa3.38□□□□□ -1.87
VPS8-228ENST00000628962 MCM5P33992 734 aa3.38□□□□□ -1.87
VPS8-228ENST00000628962 CTNNA1P35221 906 aaKnown RBP3.38□□□□□ -1.87
VPS8-228ENST00000628962 PSMB10P40306 273 aa3.38□□□□□ -1.87
VPS8-228ENST00000628962 EIF2DP41214 584 aaKnown RBP3.38□□□□□ -1.87
VPS8-228ENST00000628962 FOXL2P58012 376 aa3.38□□□□□ -1.87
VPS8-228ENST00000628962 ARHGAP8P85298 464 aa3.38□□□□□ -1.87
VPS8-228ENST00000628962 PRPF4BQ13523 1007 aaKnown RBP3.38□□□□□ -1.87
VPS8-228ENST00000628962 ALKBH1Q13686 389 aaKnown RBP3.38□□□□□ -1.87
VPS8-228ENST00000628962 CRYMQ14894 314 aa3.38□□□□□ -1.87
VPS8-228ENST00000628962 TAF11Q15544 211 aa3.38□□□□□ -1.87
VPS8-228ENST00000628962 GXYLT1Q4G148 440 aa3.38□□□□□ -1.87
VPS8-228ENST00000628962 NAA16Q6N069 864 aaPredicted RBP3.38□□□□□ -1.87
VPS8-228ENST00000628962 ACSM6Q6P461 480 aa3.38□□□□□ -1.87
VPS8-228ENST00000628962 TMEM154Q6P9G4 183 aa3.38□□□□□ -1.87
VPS8-228ENST00000628962 PRPF39Q86UA1 669 aaKnown RBP3.38□□□□□ -1.87
VPS8-228ENST00000628962 VSIG1Q86XK7 387 aa3.38□□□□□ -1.87
VPS8-228ENST00000628962 TEX11Q8IYF3 940 aa3.38□□□□□ -1.87
VPS8-228ENST00000628962 TTC30BQ8N4P2 665 aa3.38□□□□□ -1.87
VPS8-228ENST00000628962 WDTC1Q8N5D0 677 aa3.38□□□□□ -1.87
VPS8-228ENST00000628962 FRMD1Q8N878 549 aa3.38□□□□□ -1.87
VPS8-228ENST00000628962 CNOT9Q92600 299 aaKnown RBP3.38□□□□□ -1.87
VPS8-228ENST00000628962 NEUROG1Q92886 237 aa3.38□□□□□ -1.87
VPS8-228ENST00000628962 SMARCE1Q969G3 411 aa3.38□□□□□ -1.87
VPS8-228ENST00000628962 TRMT61AQ96FX7 289 aaKnown RBP3.38□□□□□ -1.87
VPS8-228ENST00000628962 MED30Q96HR3 178 aa3.38□□□□□ -1.87
VPS8-228ENST00000628962 LBHD1Q9BQE6 289 aaPredicted RBP3.38□□□□□ -1.87
VPS8-228ENST00000628962 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms