RNA–Protein interactions for RNA: ENST00000627685.2

TCF4-260, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-260ENST00000627685 SLC39A8Q9C0K1 460 aa7.76□□□□□ -1.17
TCF4-260ENST00000627685 TSPY26PQ9H489 355 aa7.76□□□□□ -1.17
TCF4-260ENST00000627685 ATP13A1Q9HD20 1204 aa7.76□□□□□ -1.17
TCF4-260ENST00000627685 ABHD10Q9NUJ1 306 aa7.76□□□□□ -1.17
TCF4-260ENST00000627685 SEPT11Q9NVA2 429 aaKnown RBP7.76□□□□□ -1.17
TCF4-260ENST00000627685 CWC15Q9P013 229 aaKnown RBP7.76□□□□□ -1.17
TCF4-260ENST00000627685 PNMA8BQ9ULN7 279 aaPredicted RBP7.76□□□□□ -1.17
TCF4-260ENST00000627685 ITM2BQ9Y287 266 aa7.76□□□□□ -1.17
TCF4-260ENST00000627685 BTBD3Q9Y2F9 522 aa7.76□□□□□ -1.17
TCF4-260ENST00000627685 PCDHGB2Q9Y5G2 931 aa7.76□□□□□ -1.17
TCF4-260ENST00000627685 SNX11Q9Y5W9 270 aa7.76□□□□□ -1.17
TCF4-260ENST00000627685 COL27A1Q8IZC6 1860 aaPredicted RBP7.76□□□□□ -1.17
TCF4-260ENST00000627685 FRYQ5TBA9 3013 aa7.76□□□□□ -1.17
TCF4-260ENST00000627685 THADAQ6YHU6 1953 aa7.75□□□□□ -1.17
TCF4-260ENST00000627685 A0A1B0GVT2 93 aa7.75□□□□□ -1.17
TCF4-260ENST00000627685 LRRC72A6NJI9 287 aa7.75□□□□□ -1.17
TCF4-260ENST00000627685 RASA4BC9J798 803 aa7.75□□□□□ -1.17
TCF4-260ENST00000627685 CBX4O00257 560 aa7.75□□□□□ -1.17
TCF4-260ENST00000627685 RAD51BO15315 384 aa7.75□□□□□ -1.17
TCF4-260ENST00000627685 SLC7A4O43246 635 aa7.75□□□□□ -1.17
TCF4-260ENST00000627685 RASA4O43374 803 aa7.75□□□□□ -1.17
TCF4-260ENST00000627685 KDELR3O43731 214 aa7.75□□□□□ -1.17
TCF4-260ENST00000627685 RAMP2O60895 175 aa7.75□□□□□ -1.17
TCF4-260ENST00000627685 LEFTY1O75610 366 aa7.75□□□□□ -1.17
TCF4-260ENST00000627685 RNASEH2AO75792 299 aaKnown RBP7.75□□□□□ -1.17
TCF4-260ENST00000627685 MTA2O94776 668 aa7.75□□□□□ -1.17
TCF4-260ENST00000627685 TRIM16O95361 564 aa7.75□□□□□ -1.17
TCF4-260ENST00000627685 WISP1O95388 367 aa7.75□□□□□ -1.17
TCF4-260ENST00000627685 CER1O95813 267 aa7.75□□□□□ -1.17
TCF4-260ENST00000627685 IL1BP01584 269 aa7.75□□□□□ -1.17
TCF4-260ENST00000627685 CAPNS1P04632 268 aa7.75□□□□□ -1.17
TCF4-260ENST00000627685 H2AFB1P0C5Y9 115 aa7.75□□□□□ -1.17
TCF4-260ENST00000627685 H2AFB2P0C5Z0 115 aa7.75□□□□□ -1.17
TCF4-260ENST00000627685 GLB1P16278 677 aa7.75□□□□□ -1.17
TCF4-260ENST00000627685 ITIH2P19823 946 aa7.75□□□□□ -1.17
TCF4-260ENST00000627685 CR2P20023 1033 aa7.75□□□□□ -1.17
TCF4-260ENST00000627685 PTMSP20962 102 aa7.75□□□□□ -1.17
TCF4-260ENST00000627685 PSMA2P25787 234 aa7.75□□□□□ -1.17
TCF4-260ENST00000627685 EPHB2P29323 1055 aa7.75□□□□□ -1.17
TCF4-260ENST00000627685 CHRNA3P32297 505 aa7.75□□□□□ -1.17
TCF4-260ENST00000627685 PCK1P35558 622 aa7.75□□□□□ -1.17
TCF4-260ENST00000627685 NUDT1P36639 197 aa7.75□□□□□ -1.17
TCF4-260ENST00000627685 CSNK1EP49674 416 aaKnown RBP7.75□□□□□ -1.17
TCF4-260ENST00000627685 SKOR2Q2VWA4 1001 aaPredicted RBP7.75□□□□□ -1.17
TCF4-260ENST00000627685 ATP13A4Q4VNC1 1196 aa7.75□□□□□ -1.17
TCF4-260ENST00000627685 ATXN7L2Q5T6C5 722 aaPredicted RBP7.75□□□□□ -1.17
TCF4-260ENST00000627685 SEL1L3Q68CR1 1132 aa7.75□□□□□ -1.17
TCF4-260ENST00000627685 SPECC1LQ69YQ0 1117 aa7.75□□□□□ -1.17
TCF4-260ENST00000627685 ALKBH5Q6P6C2 394 aaKnown RBP7.75□□□□□ -1.17
TCF4-260ENST00000627685 LRRC31Q6UY01 552 aa7.75□□□□□ -1.17
TCF4-260ENST00000627685 GCNT7Q6ZNI0 430 aa7.75□□□□□ -1.17
TCF4-260ENST00000627685 RFX8Q6ZV50 586 aa7.75□□□□□ -1.17
TCF4-260ENST00000627685 POLNQ7Z5Q5 900 aa7.75□□□□□ -1.17
TCF4-260ENST00000627685 DSG4Q86SJ6 1040 aa7.75□□□□□ -1.17
TCF4-260ENST00000627685 GLRX5Q86SX6 157 aa7.75□□□□□ -1.17
TCF4-260ENST00000627685 SLC22A18ASQ8N1D0 253 aa7.75□□□□□ -1.17
TCF4-260ENST00000627685 PGBD5Q8N414 524 aa7.75□□□□□ -1.17
TCF4-260ENST00000627685 PCDH20Q8N6Y1 951 aaKnown RBP7.75□□□□□ -1.17
TCF4-260ENST00000627685 ATP11CQ8NB49 1132 aa7.75□□□□□ -1.17
TCF4-260ENST00000627685 DEFB124Q8NES8 71 aa7.75□□□□□ -1.17
TCF4-260ENST00000627685 TMIEQ8NEW7 156 aa7.75□□□□□ -1.17
TCF4-260ENST00000627685 OR6K2Q8NGY2 324 aa7.75□□□□□ -1.17
TCF4-260ENST00000627685 GRIN3AQ8TCU5 1115 aa7.75□□□□□ -1.17
TCF4-260ENST00000627685 OR8D1Q8WZ84 308 aa7.75□□□□□ -1.17
TCF4-260ENST00000627685 FAF2Q96CS3 445 aa7.75□□□□□ -1.17
TCF4-260ENST00000627685 CSPG4P5Q96PW8 444 aa7.75□□□□□ -1.17
TCF4-260ENST00000627685 HDAC8Q9BY41 377 aa7.75□□□□□ -1.17
TCF4-260ENST00000627685 TM6SF2Q9BZW4 377 aa7.75□□□□□ -1.17
TCF4-260ENST00000627685 MAGEH1Q9H213 219 aa7.75□□□□□ -1.17
TCF4-260ENST00000627685 PCDH18Q9HCL0 1135 aa7.75□□□□□ -1.17
TCF4-260ENST00000627685 SOX13Q9UN79 622 aa7.75□□□□□ -1.17
TCF4-260ENST00000627685 CA5BQ9Y2D0 317 aa7.75□□□□□ -1.17
TCF4-260ENST00000627685 FADS3Q9Y5Q0 445 aa7.75□□□□□ -1.17
TCF4-260ENST00000627685 CEP192Q8TEP8 1941 aa7.75□□□□□ -1.17
TCF4-260ENST00000627685 CACNA1BQ00975 2339 aa7.75□□□□□ -1.17
TCF4-260ENST00000627685 COL5A1P20908 1838 aaPredicted RBP7.75□□□□□ -1.17
TCF4-260ENST00000627685 NUMA1Q14980 2115 aa7.75□□□□□ -1.17
TCF4-260ENST00000627685 KNL1Q8NG31 2342 aa7.74□□□□□ -1.17
TCF4-260ENST00000627685 SSU72P8A0A1W2PR75 194 aa7.74□□□□□ -1.17
TCF4-260ENST00000627685 FAM221BA6H8Z2 402 aa7.74□□□□□ -1.17
TCF4-260ENST00000627685 SOWAHDA6NJG2 315 aa7.74□□□□□ -1.17
TCF4-260ENST00000627685 C3orf70A6NLC5 250 aaPredicted RBP7.74□□□□□ -1.17
TCF4-260ENST00000627685 H0Y8X5 98 aa7.74□□□□□ -1.17
TCF4-260ENST00000627685 KCNK3O14649 394 aa7.74□□□□□ -1.17
TCF4-260ENST00000627685 VILLO15195 856 aa7.74□□□□□ -1.17
TCF4-260ENST00000627685 DFNA5O60443 496 aa7.74□□□□□ -1.17
TCF4-260ENST00000627685 PRAMEF11O60813 436 aa7.74□□□□□ -1.17
TCF4-260ENST00000627685 GSRP00390 522 aa7.74□□□□□ -1.17
TCF4-260ENST00000627685 CCDC172P0C7W6 258 aa7.74□□□□□ -1.17
TCF4-260ENST00000627685 MYBL1P10243 752 aa7.74□□□□□ -1.17
TCF4-260ENST00000627685 ERCC2P18074 760 aa7.74□□□□□ -1.17
TCF4-260ENST00000627685 HTR7P34969 479 aa7.74□□□□□ -1.17
TCF4-260ENST00000627685 HCAR3P49019 387 aa7.74□□□□□ -1.17
TCF4-260ENST00000627685 ARL4DP49703 201 aa7.74□□□□□ -1.17
TCF4-260ENST00000627685 NXPH1P58417 271 aa7.74□□□□□ -1.17
TCF4-260ENST00000627685 YBEYP58557 167 aaPredicted RBP7.74□□□□□ -1.17
TCF4-260ENST00000627685 RACK1P63244 317 aaKnown RBP7.74□□□□□ -1.17
TCF4-260ENST00000627685 KRT83P78385 493 aa7.74□□□□□ -1.17
TCF4-260ENST00000627685 SLC20A2Q08357 652 aa7.74□□□□□ -1.17
TCF4-260ENST00000627685 TCEAL1Q15170 157 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms