RNA–Protein interactions for RNA: ENST00000627587.2

PDLIM5-223, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-223ENST00000627587 UBA2Q9UBT2 640 aaPredicted RBP9.6□□□□□ -0.87
PDLIM5-223ENST00000627587 TBK1Q9UHD2 729 aa9.6□□□□□ -0.87
PDLIM5-223ENST00000627587 SLC24A2Q9UI40 661 aa9.6□□□□□ -0.87
PDLIM5-223ENST00000627587 ZCWPW2A0A1B0GU75 182 aa9.59□□□□□ -0.87
PDLIM5-223ENST00000627587 DCDC2BA2VCK2 349 aa9.59□□□□□ -0.87
PDLIM5-223ENST00000627587 FAM159BA6NKW6 160 aa9.59□□□□□ -0.87
PDLIM5-223ENST00000627587 UGT1A9O60656 530 aa9.59□□□□□ -0.87
PDLIM5-223ENST00000627587 PMPCBO75439 489 aa9.59□□□□□ -0.87
PDLIM5-223ENST00000627587 CYBBP04839 570 aa9.59□□□□□ -0.87
PDLIM5-223ENST00000627587 TPH1P17752 444 aa9.59□□□□□ -0.87
PDLIM5-223ENST00000627587 CR2P20023 1033 aa9.59□□□□□ -0.87
PDLIM5-223ENST00000627587 HPDP32754 393 aaPredicted RBP9.59□□□□□ -0.87
PDLIM5-223ENST00000627587 CSKP41240 450 aa9.59□□□□□ -0.87
PDLIM5-223ENST00000627587 CD86P42081 329 aa9.59□□□□□ -0.87
PDLIM5-223ENST00000627587 WNT3AP56704 352 aa9.59□□□□□ -0.87
PDLIM5-223ENST00000627587 GEMIN4P57678 1058 aaKnown RBP9.59□□□□□ -0.87
PDLIM5-223ENST00000627587 SATB1Q01826 763 aa9.59□□□□□ -0.87
PDLIM5-223ENST00000627587 MPP3Q13368 585 aa9.59□□□□□ -0.87
PDLIM5-223ENST00000627587 RFTN1Q14699 578 aaPredicted RBP9.59□□□□□ -0.87
PDLIM5-223ENST00000627587 CRYMQ14894 314 aa9.59□□□□□ -0.87
PDLIM5-223ENST00000627587 CYTH1Q15438 398 aa9.59□□□□□ -0.87
PDLIM5-223ENST00000627587 MPP7Q5T2T1 576 aa9.59□□□□□ -0.87
PDLIM5-223ENST00000627587 ADGRD1Q6QNK2 874 aa9.59□□□□□ -0.87
PDLIM5-223ENST00000627587 CES3Q6UWW8 571 aa9.59□□□□□ -0.87
PDLIM5-223ENST00000627587 TPGS1Q6ZTW0 290 aa9.59□□□□□ -0.87
PDLIM5-223ENST00000627587 TMEM135Q86UB9 458 aa9.59□□□□□ -0.87
PDLIM5-223ENST00000627587 ARID3BQ8IVW6 561 aaPredicted RBP9.59□□□□□ -0.87
PDLIM5-223ENST00000627587 MFN1Q8IWA4 741 aa9.59□□□□□ -0.87
PDLIM5-223ENST00000627587 APCDD1Q8J025 514 aa9.59□□□□□ -0.87
PDLIM5-223ENST00000627587 GSDMBQ8TAX9 411 aa9.59□□□□□ -0.87
PDLIM5-223ENST00000627587 SLC44A1Q8WWI5 657 aa9.59□□□□□ -0.87
PDLIM5-223ENST00000627587 ATP2A3Q93084 1043 aa9.59□□□□□ -0.87
PDLIM5-223ENST00000627587 PSKH2Q96QS6 385 aa9.59□□□□□ -0.87
PDLIM5-223ENST00000627587 TBL1YQ9BQ87 522 aa9.59□□□□□ -0.87
PDLIM5-223ENST00000627587 FICDQ9BVA6 458 aa9.59□□□□□ -0.87
PDLIM5-223ENST00000627587 POLR1EQ9GZS1 481 aaKnown RBP9.59□□□□□ -0.87
PDLIM5-223ENST00000627587 LINC00597Q9H2U6 94 aa9.59□□□□□ -0.87
PDLIM5-223ENST00000627587 UGT1A7Q9HAW7 530 aa9.59□□□□□ -0.87
PDLIM5-223ENST00000627587 UGT1A10Q9HAW8 530 aa9.59□□□□□ -0.87
PDLIM5-223ENST00000627587 UGT1A8Q9HAW9 530 aa9.59□□□□□ -0.87
PDLIM5-223ENST00000627587 ARNT2Q9HBZ2 717 aa9.59□□□□□ -0.87
PDLIM5-223ENST00000627587 VPS45Q9NRW7 570 aa9.59□□□□□ -0.87
PDLIM5-223ENST00000627587 SEMA4GQ9NTN9 838 aa9.59□□□□□ -0.87
PDLIM5-223ENST00000627587 IL1RAPL1Q9NZN1 696 aa9.59□□□□□ -0.87
PDLIM5-223ENST00000627587 SLC17A6Q9P2U8 582 aa9.59□□□□□ -0.87
PDLIM5-223ENST00000627587 INTS6Q9UL03 887 aaKnown RBP9.59□□□□□ -0.87
PDLIM5-223ENST00000627587 DMXL1Q9Y485 3027 aa9.59□□□□□ -0.87
PDLIM5-223ENST00000627587 KIAA1549LQ6ZVL6 1849 aa9.59□□□□□ -0.87
PDLIM5-223ENST00000627587 F5P12259 2224 aa9.59□□□□□ -0.87
PDLIM5-223ENST00000627587 TICRRQ7Z2Z1 1910 aa9.59□□□□□ -0.87
PDLIM5-223ENST00000627587 CCDC163A0A0D9SF12 145 aa9.59□□□□□ -0.87
PDLIM5-223ENST00000627587 SPECC1L-ADORA2AF8WAN1 911 aa9.59□□□□□ -0.87
PDLIM5-223ENST00000627587 CBX4O00257 560 aa9.59□□□□□ -0.87
PDLIM5-223ENST00000627587 HRO43593 1189 aa9.59□□□□□ -0.87
PDLIM5-223ENST00000627587 ATG13O75143 517 aa9.59□□□□□ -0.87
PDLIM5-223ENST00000627587 FAM155BO75949 473 aa9.59□□□□□ -0.87
PDLIM5-223ENST00000627587 TCF3P15923 654 aa9.59□□□□□ -0.87
PDLIM5-223ENST00000627587 PGAM1P18669 254 aa9.59□□□□□ -0.87
PDLIM5-223ENST00000627587 NPY2RP49146 381 aa9.59□□□□□ -0.87
PDLIM5-223ENST00000627587 ATP1A2P50993 1020 aa9.59□□□□□ -0.87
PDLIM5-223ENST00000627587 PPARDQ03181 441 aa9.59□□□□□ -0.87
PDLIM5-223ENST00000627587 MPP2Q14168 576 aa9.59□□□□□ -0.87
PDLIM5-223ENST00000627587 LINGO4Q6UY18 593 aa9.59□□□□□ -0.87
PDLIM5-223ENST00000627587 MICALCLQ6ZW33 695 aa9.59□□□□□ -0.87
PDLIM5-223ENST00000627587 CYS1Q717R9 158 aa9.59□□□□□ -0.87
PDLIM5-223ENST00000627587 TAOK1Q7L7X3 1001 aa9.59□□□□□ -0.87
PDLIM5-223ENST00000627587 WDR5BQ86VZ2 330 aa9.59□□□□□ -0.87
PDLIM5-223ENST00000627587 TMEM25Q86YD3 366 aa9.59□□□□□ -0.87
PDLIM5-223ENST00000627587 ARFGAP2Q8N6H7 521 aa9.59□□□□□ -0.87
PDLIM5-223ENST00000627587 VOPP1Q96AW1 172 aa9.59□□□□□ -0.87
PDLIM5-223ENST00000627587 MRRFQ96E11 262 aaKnown RBP9.59□□□□□ -0.87
PDLIM5-223ENST00000627587 MFSD3Q96ES6 412 aa9.59□□□□□ -0.87
PDLIM5-223ENST00000627587 SEMA3CQ99985 751 aa9.59□□□□□ -0.87
PDLIM5-223ENST00000627587 CINPQ9BW66 212 aaPredicted RBP9.59□□□□□ -0.87
PDLIM5-223ENST00000627587 IL22Q9GZX6 179 aa9.59□□□□□ -0.87
PDLIM5-223ENST00000627587 KIF9Q9HAQ2 790 aa9.59□□□□□ -0.87
PDLIM5-223ENST00000627587 CHRAC1Q9NRG0 131 aa9.59□□□□□ -0.87
PDLIM5-223ENST00000627587 PSMC3IPQ9P2W1 217 aaPredicted RBP9.59□□□□□ -0.87
PDLIM5-223ENST00000627587 SEPT3Q9UH03 358 aa9.59□□□□□ -0.87
PDLIM5-223ENST00000627587 VPS51Q9UID3 782 aa9.59□□□□□ -0.87
PDLIM5-223ENST00000627587 IKBKGQ9Y6K9 419 aa9.59□□□□□ -0.87
PDLIM5-223ENST00000627587 GPR179Q6PRD1 2367 aa9.59□□□□□ -0.87
PDLIM5-223ENST00000627587 COL4A2P08572 1712 aa9.58□□□□□ -0.88
PDLIM5-223ENST00000627587 LOC285095A0A1B0GVY8 99 aa9.58□□□□□ -0.88
PDLIM5-223ENST00000627587 MAGEB16A2A368 324 aa9.58□□□□□ -0.88
PDLIM5-223ENST00000627587 HMX2A2RU54 273 aa9.58□□□□□ -0.88
PDLIM5-223ENST00000627587 CHURC1-FNTBB4DL54 471 aa9.58□□□□□ -0.88
PDLIM5-223ENST00000627587 MT-CO1P00395 513 aa9.58□□□□□ -0.88
PDLIM5-223ENST00000627587 PENKP01210 267 aaPredicted RBP9.58□□□□□ -0.88
PDLIM5-223ENST00000627587 POLBP06746 335 aa9.58□□□□□ -0.88
PDLIM5-223ENST00000627587 ATXN1LP0C7T5 689 aaKnown RBP9.58□□□□□ -0.88
PDLIM5-223ENST00000627587 HLA-FP30511 346 aa9.58□□□□□ -0.88
PDLIM5-223ENST00000627587 CD70P32970 193 aa9.58□□□□□ -0.88
PDLIM5-223ENST00000627587 MSH2P43246 934 aa9.58□□□□□ -0.88
PDLIM5-223ENST00000627587 FNTBP49356 437 aa9.58□□□□□ -0.88
PDLIM5-223ENST00000627587 LIMK1P53667 647 aa9.58□□□□□ -0.88
PDLIM5-223ENST00000627587 PPP2R2AP63151 447 aa9.58□□□□□ -0.88
PDLIM5-223ENST00000627587 LMAN2Q12907 356 aa9.58□□□□□ -0.88
PDLIM5-223ENST00000627587 TMED2Q15363 201 aa9.58□□□□□ -0.88
PDLIM5-223ENST00000627587 PCSK7Q16549 785 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms