RNA–Protein interactions for RNA: ENST00000625664.2

USP8-219, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 5 BASIC

Gene USP8, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-219ENST00000625664 UNQ6494/PRO21346Q6UXR6 183 aa12.7□□□□□ -0.38
USP8-219ENST00000625664 TMEM139Q8IV31 216 aa12.7□□□□□ -0.38
USP8-219ENST00000625664 RHOT2Q8IXI1 618 aa12.7□□□□□ -0.38
USP8-219ENST00000625664 BBS5Q8N3I7 341 aa12.7□□□□□ -0.38
USP8-219ENST00000625664 SLC25A45Q8N413 288 aa12.7□□□□□ -0.38
USP8-219ENST00000625664 TC2NQ8N9U0 490 aa12.7□□□□□ -0.38
USP8-219ENST00000625664 FAM174AQ8TBP5 190 aa12.7□□□□□ -0.38
USP8-219ENST00000625664 NSMCE1Q8WV22 266 aa12.7□□□□□ -0.38
USP8-219ENST00000625664 RFFLQ8WZ73 363 aa12.7□□□□□ -0.38
USP8-219ENST00000625664 RAPGEF5Q92565 580 aa12.7□□□□□ -0.38
USP8-219ENST00000625664 ECHDC3Q96DC8 303 aa12.7□□□□□ -0.38
USP8-219ENST00000625664 ZNF670Q9BS34 389 aa12.7□□□□□ -0.38
USP8-219ENST00000625664 MBNL1Q9NR56 388 aaKnown RBP12.7□□□□□ -0.38
USP8-219ENST00000625664 GPR27Q9NS67 375 aa12.7□□□□□ -0.38
USP8-219ENST00000625664 KCND1Q9NSA2 647 aa12.7□□□□□ -0.38
USP8-219ENST00000625664 UCKL1Q9NWZ5 548 aa12.7□□□□□ -0.38
USP8-219ENST00000625664 LCMT1Q9UIC8 334 aa12.7□□□□□ -0.38
USP8-219ENST00000625664 GOLGA4Q13439 2230 aaKnown RBP12.7□□□□□ -0.38
USP8-219ENST00000625664 CACNA1BQ00975 2339 aa12.7□□□□□ -0.38
USP8-219ENST00000625664 LRRK1Q38SD2 2015 aa12.7□□□□□ -0.38
USP8-219ENST00000625664 FFAR2O15552 330 aa12.69□□□□□ -0.38
USP8-219ENST00000625664 PIAS2O75928 621 aa12.69□□□□□ -0.38
USP8-219ENST00000625664 C6P13671 934 aa12.69□□□□□ -0.38
USP8-219ENST00000625664 HSPA9P38646 679 aaKnown RBP12.69□□□□□ -0.38
USP8-219ENST00000625664 MMP12P39900 470 aa12.69□□□□□ -0.38
USP8-219ENST00000625664 MMP13P45452 471 aa12.69□□□□□ -0.38
USP8-219ENST00000625664 LIG3P49916 1009 aa12.69□□□□□ -0.38
USP8-219ENST00000625664 PFN3P60673 137 aa12.69□□□□□ -0.38
USP8-219ENST00000625664 MARC1Q5VT66 337 aa12.69□□□□□ -0.38
USP8-219ENST00000625664 NYAP1Q6ZVC0 841 aa12.69□□□□□ -0.38
USP8-219ENST00000625664 DCP2Q8IU60 420 aaKnown RBP12.69□□□□□ -0.38
USP8-219ENST00000625664 MAP7D3Q8IWC1 876 aa12.69□□□□□ -0.38
USP8-219ENST00000625664 TP53I13Q8NBR0 393 aaPredicted RBP12.69□□□□□ -0.38
USP8-219ENST00000625664 MYRIPQ8NFW9 859 aa12.69□□□□□ -0.38
USP8-219ENST00000625664 PDCD6IPQ8WUM4 868 aaKnown RBP12.69□□□□□ -0.38
USP8-219ENST00000625664 LRRN4Q8WUT4 740 aa12.69□□□□□ -0.38
USP8-219ENST00000625664 GATA6Q92908 595 aa12.69□□□□□ -0.38
USP8-219ENST00000625664 CENPTQ96BT3 561 aa12.69□□□□□ -0.38
USP8-219ENST00000625664 MGME1Q9BQP7 344 aa12.69□□□□□ -0.38
USP8-219ENST00000625664 C1QTNF7Q9BXJ2 289 aa12.69□□□□□ -0.38
USP8-219ENST00000625664 NOD2Q9HC29 1040 aa12.69□□□□□ -0.38
USP8-219ENST00000625664 NT5MQ9NPB1 228 aa12.69□□□□□ -0.38
USP8-219ENST00000625664 SCUBE2Q9NQ36 999 aa12.69□□□□□ -0.38
USP8-219ENST00000625664 MSRB2Q9Y3D2 182 aa12.69□□□□□ -0.38
USP8-219ENST00000625664 PCDHGC4Q9Y5F7 938 aa12.69□□□□□ -0.38
USP8-219ENST00000625664 COL5A1P20908 1838 aaPredicted RBP12.69□□□□□ -0.38
USP8-219ENST00000625664 SPTY2D1-AS1A0A0U1RR47 76 aa12.69□□□□□ -0.38
USP8-219ENST00000625664 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.69□□□□□ -0.38
USP8-219ENST00000625664 LRRD1A4D1F6 860 aa12.69□□□□□ -0.38
USP8-219ENST00000625664 A8MX80 341 aa12.69□□□□□ -0.38
USP8-219ENST00000625664 TRIM38O00635 465 aa12.69□□□□□ -0.38
USP8-219ENST00000625664 TRAFD1O14545 582 aaPredicted RBP12.69□□□□□ -0.38
USP8-219ENST00000625664 LZTS3O60299 673 aaPredicted RBP12.69□□□□□ -0.38
USP8-219ENST00000625664 MTA2O94776 668 aa12.69□□□□□ -0.38
USP8-219ENST00000625664 DKK1O94907 266 aa12.69□□□□□ -0.38
USP8-219ENST00000625664 CR2P20023 1033 aa12.69□□□□□ -0.38
USP8-219ENST00000625664 KDELR1P24390 212 aa12.69□□□□□ -0.38
USP8-219ENST00000625664 GARSP41250 739 aaKnown RBP12.69□□□□□ -0.38
USP8-219ENST00000625664 THOP1P52888 689 aa12.69□□□□□ -0.38
USP8-219ENST00000625664 GBE1Q04446 702 aa12.69□□□□□ -0.38
USP8-219ENST00000625664 GALNT2Q10471 571 aa12.69□□□□□ -0.38
USP8-219ENST00000625664 PAFAH1B3Q15102 231 aaKnown RBP12.69□□□□□ -0.38
USP8-219ENST00000625664 IRF4Q15306 451 aa12.69□□□□□ -0.38
USP8-219ENST00000625664 WSCD2Q2TBF2 565 aa12.69□□□□□ -0.38
USP8-219ENST00000625664 DHRS13Q6UX07 377 aa12.69□□□□□ -0.38
USP8-219ENST00000625664 PARGQ86W56 976 aa12.69□□□□□ -0.38
USP8-219ENST00000625664 PQLC3Q8N755 202 aa12.69□□□□□ -0.38
USP8-219ENST00000625664 FAF2Q96CS3 445 aa12.69□□□□□ -0.38
USP8-219ENST00000625664 NUDCD1Q96RS6 583 aa12.69□□□□□ -0.38
USP8-219ENST00000625664 TMEM121BQ9BXQ6 578 aaPredicted RBP12.69□□□□□ -0.38
USP8-219ENST00000625664 HYOU1Q9Y4L1 999 aa12.69□□□□□ -0.38
USP8-219ENST00000625664 PTPRBP23467 1997 aa12.68□□□□□ -0.38
USP8-219ENST00000625664 SIGLEC6O43699 453 aa12.68□□□□□ -0.38
USP8-219ENST00000625664 NEBLO76041 1014 aa12.68□□□□□ -0.38
USP8-219ENST00000625664 PROS1P07225 676 aa12.68□□□□□ -0.38
USP8-219ENST00000625664 ARHGAP25P42331 645 aa12.68□□□□□ -0.38
USP8-219ENST00000625664 MAGEA1P43355 309 aa12.68□□□□□ -0.38
USP8-219ENST00000625664 TRAF2Q12933 501 aa12.68□□□□□ -0.38
USP8-219ENST00000625664 RALGDSQ12967 914 aa12.68□□□□□ -0.38
USP8-219ENST00000625664 LRRC14Q15048 493 aa12.68□□□□□ -0.38
USP8-219ENST00000625664 ST3GAL2Q16842 350 aa12.68□□□□□ -0.38
USP8-219ENST00000625664 MARCH9Q86YJ5 346 aa12.68□□□□□ -0.38
USP8-219ENST00000625664 LRRC49Q8IUZ0 686 aa12.68□□□□□ -0.38
USP8-219ENST00000625664 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.68□□□□□ -0.38
USP8-219ENST00000625664 IFT43Q96FT9 208 aa12.68□□□□□ -0.38
USP8-219ENST00000625664 KLF15Q9UIH9 416 aa12.68□□□□□ -0.38
USP8-219ENST00000625664 INTUQ9ULD6 942 aa12.68□□□□□ -0.38
USP8-219ENST00000625664 HTRA2O43464 458 aaPredicted RBP12.67□□□□□ -0.38
USP8-219ENST00000625664 SOCS5O75159 536 aa12.67□□□□□ -0.38
USP8-219ENST00000625664 RFPL3O75679 317 aa12.67□□□□□ -0.38
USP8-219ENST00000625664 CPP00450 1065 aa12.67□□□□□ -0.38
USP8-219ENST00000625664 CSF2P04141 144 aa12.67□□□□□ -0.38
USP8-219ENST00000625664 KRT1P04264 644 aa12.67□□□□□ -0.38
USP8-219ENST00000625664 PCCBP05166 539 aa12.67□□□□□ -0.38
USP8-219ENST00000625664 ELFN1P0C7U0 828 aa12.67□□□□□ -0.38
USP8-219ENST00000625664 NME1P15531 152 aaKnown RBP12.67□□□□□ -0.38
USP8-219ENST00000625664 JUNDP17535 347 aa12.67□□□□□ -0.38
USP8-219ENST00000625664 ACADVLP49748 655 aa12.67□□□□□ -0.38
USP8-219ENST00000625664 CLDN6P56747 220 aa12.67□□□□□ -0.38
USP8-219ENST00000625664 HNRNPKP61978 463 aaKnown RBP eCLIP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms