RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 CDK17Q00537 523 aa14.01□□□□□ -0.17
SNX1-214ENST00000625244 DPYDQ12882 1025 aa14.01□□□□□ -0.17
SNX1-214ENST00000625244 NR1D2Q14995 579 aa14.01□□□□□ -0.17
SNX1-214ENST00000625244 LRRC14Q15048 493 aa14.01□□□□□ -0.17
SNX1-214ENST00000625244 INPP5JQ15735 1006 aaPredicted RBP14.01□□□□□ -0.17
SNX1-214ENST00000625244 RETSATQ6NUM9 610 aa14.01□□□□□ -0.17
SNX1-214ENST00000625244 TFAP2DQ7Z6R9 452 aa14.01□□□□□ -0.17
SNX1-214ENST00000625244 SETD3Q86TU7 594 aaPredicted RBP14.01□□□□□ -0.17
SNX1-214ENST00000625244 TTC7BQ86TV6 843 aa14.01□□□□□ -0.17
SNX1-214ENST00000625244 ZNF683Q8IZ20 524 aa14.01□□□□□ -0.17
SNX1-214ENST00000625244 SLC34A3Q8N130 599 aa14.01□□□□□ -0.17
SNX1-214ENST00000625244 RYBPQ8N488 228 aaPredicted RBP14.01□□□□□ -0.17
SNX1-214ENST00000625244 OR4D9Q8NGE8 314 aa14.01□□□□□ -0.17
SNX1-214ENST00000625244 MARVELD3Q96A59 401 aa14.01□□□□□ -0.17
SNX1-214ENST00000625244 WDR92Q96MX6 357 aa14.01□□□□□ -0.17
SNX1-214ENST00000625244 ZNF396Q96N95 335 aaPredicted RBP14.01□□□□□ -0.17
SNX1-214ENST00000625244 KLHL32Q96NJ5 620 aa14.01□□□□□ -0.17
SNX1-214ENST00000625244 SPON2Q9BUD6 331 aa14.01□□□□□ -0.17
SNX1-214ENST00000625244 TMEM168Q9H0V1 697 aa14.01□□□□□ -0.17
SNX1-214ENST00000625244 MRPL40Q9NQ50 206 aaKnown RBP14.01□□□□□ -0.17
SNX1-214ENST00000625244 COQ4Q9Y3A0 265 aa14.01□□□□□ -0.17
SNX1-214ENST00000625244 PCDHB4Q9Y5E5 795 aa14.01□□□□□ -0.17
SNX1-214ENST00000625244 ZNF106Q9H2Y7 1883 aaKnown RBP14□□□□□ -0.17
SNX1-214ENST00000625244 TMEM202A6NGA9 273 aa14□□□□□ -0.17
SNX1-214ENST00000625244 RHPN2P1A8MT19 583 aa14□□□□□ -0.17
SNX1-214ENST00000625244 E5RJQ4 531 aa14□□□□□ -0.17
SNX1-214ENST00000625244 PPP6R2O75170 966 aa14□□□□□ -0.17
SNX1-214ENST00000625244 DNAJB5O75953 348 aa14□□□□□ -0.17
SNX1-214ENST00000625244 CD160O95971 181 aa14□□□□□ -0.17
SNX1-214ENST00000625244 F13A1P00488 732 aa14□□□□□ -0.17
SNX1-214ENST00000625244 TIMP2P16035 220 aa14□□□□□ -0.17
SNX1-214ENST00000625244 ERV3-1Q14264 604 aa14□□□□□ -0.17
SNX1-214ENST00000625244 STILQ15468 1287 aa14□□□□□ -0.17
SNX1-214ENST00000625244 FOXD4L5Q5VV16 416 aaPredicted RBP14□□□□□ -0.17
SNX1-214ENST00000625244 C17orf82Q86X59 251 aaPredicted RBP14□□□□□ -0.17
SNX1-214ENST00000625244 DEFB106AQ8N104 65 aa14□□□□□ -0.17
SNX1-214ENST00000625244 FOXD4L4Q8WXT5 416 aaPredicted RBP14□□□□□ -0.17
SNX1-214ENST00000625244 TEFMQ96QE5 360 aaKnown RBP14□□□□□ -0.17
SNX1-214ENST00000625244 SLC4A5Q9BY07 1137 aa14□□□□□ -0.17
SNX1-214ENST00000625244 THAP9Q9H5L6 903 aa14□□□□□ -0.17
SNX1-214ENST00000625244 FGF22Q9HCT0 170 aa14□□□□□ -0.17
SNX1-214ENST00000625244 ANLNQ9NQW6 1124 aa14□□□□□ -0.17
SNX1-214ENST00000625244 SPATS2LQ9NUQ6 558 aaKnown RBP14□□□□□ -0.17
SNX1-214ENST00000625244 MPP6Q9NZW5 540 aa14□□□□□ -0.17
SNX1-214ENST00000625244 ATP6V1DQ9Y5K8 247 aa14□□□□□ -0.17
SNX1-214ENST00000625244 SPG11Q96JI7 2443 aa14□□□□□ -0.17
SNX1-214ENST00000625244 TNRC6AQ8NDV7 1962 aaKnown RBP14□□□□□ -0.17
SNX1-214ENST00000625244 ARHGAP10A1A4S6 786 aa13.99□□□□□ -0.17
SNX1-214ENST00000625244 I6L893 689 aaPredicted RBP13.99□□□□□ -0.17
SNX1-214ENST00000625244 KRIT1O00522 736 aa13.99□□□□□ -0.17
SNX1-214ENST00000625244 STX10O60499 249 aa13.99□□□□□ -0.17
SNX1-214ENST00000625244 CUTAO60888 179 aa13.99□□□□□ -0.17
SNX1-214ENST00000625244 STK17BO94768 372 aa13.99□□□□□ -0.17
SNX1-214ENST00000625244 RPL13P26373 211 aaKnown RBP13.99□□□□□ -0.17
SNX1-214ENST00000625244 STAT5AP42229 794 aa13.99□□□□□ -0.17
SNX1-214ENST00000625244 ACADSBP45954 432 aa13.99□□□□□ -0.17
SNX1-214ENST00000625244 PMS2P54278 862 aa13.99□□□□□ -0.17
SNX1-214ENST00000625244 SLC20A2Q08357 652 aa13.99□□□□□ -0.17
SNX1-214ENST00000625244 NME3Q13232 169 aa13.99□□□□□ -0.17
SNX1-214ENST00000625244 DENND1BQ6P3S1 775 aa13.99□□□□□ -0.17
SNX1-214ENST00000625244 ATL2Q8NHH9 583 aa13.99□□□□□ -0.17
SNX1-214ENST00000625244 KAT5Q92993 513 aa13.99□□□□□ -0.17
SNX1-214ENST00000625244 PAGE5Q96GU1 130 aa13.99□□□□□ -0.17
SNX1-214ENST00000625244 SLC2A13Q96QE2 648 aa13.99□□□□□ -0.17
SNX1-214ENST00000625244 MED15Q96RN5 788 aa13.99□□□□□ -0.17
SNX1-214ENST00000625244 UNKQ9C0B0 810 aaKnown RBP13.99□□□□□ -0.17
SNX1-214ENST00000625244 ATP13A1Q9HD20 1204 aa13.99□□□□□ -0.17
SNX1-214ENST00000625244 APMAPQ9HDC9 416 aa13.99□□□□□ -0.17
SNX1-214ENST00000625244 KCND3Q9UK17 655 aa13.99□□□□□ -0.17
SNX1-214ENST00000625244 MAPK8IP1Q9UQF2 711 aa13.99□□□□□ -0.17
SNX1-214ENST00000625244 POLHQ9Y253 713 aa13.99□□□□□ -0.17
SNX1-214ENST00000625244 TMEM184BQ9Y519 407 aaPredicted RBP13.99□□□□□ -0.17
SNX1-214ENST00000625244 OAS3Q9Y6K5 1087 aaKnown RBP13.99□□□□□ -0.17
SNX1-214ENST00000625244 CHD5Q8TDI0 1954 aa13.99□□□□□ -0.17
SNX1-214ENST00000625244 DRGXA6NNA5 263 aa13.98□□□□□ -0.17
SNX1-214ENST00000625244 HNRNPRO43390 633 aaKnown RBP13.98□□□□□ -0.17
SNX1-214ENST00000625244 PCCBP05166 539 aa13.98□□□□□ -0.17
SNX1-214ENST00000625244 TBXAS1P24557 533 aaPredicted RBP13.98□□□□□ -0.17
SNX1-214ENST00000625244 OR1E1P30953 314 aa13.98□□□□□ -0.17
SNX1-214ENST00000625244 NAA30Q147X3 362 aaPredicted RBP13.98□□□□□ -0.17
SNX1-214ENST00000625244 ARTNQ5T4W7 220 aa13.98□□□□□ -0.17
SNX1-214ENST00000625244 TMEM110Q86TL2 294 aa13.98□□□□□ -0.17
SNX1-214ENST00000625244 TP53INP2Q8IXH6 220 aa13.98□□□□□ -0.17
SNX1-214ENST00000625244 PLPP6Q8IY26 295 aa13.98□□□□□ -0.17
SNX1-214ENST00000625244 OR56A4Q8NGH8 313 aa13.98□□□□□ -0.17
SNX1-214ENST00000625244 KIAA1524Q8TCG1 905 aa13.98□□□□□ -0.17
SNX1-214ENST00000625244 ZDHHC1Q8WTX9 485 aa13.98□□□□□ -0.17
SNX1-214ENST00000625244 FUBP1Q96AE4 644 aaKnown RBP13.98□□□□□ -0.17
SNX1-214ENST00000625244 TRIM55Q9BYV6 548 aa13.98□□□□□ -0.17
SNX1-214ENST00000625244 TRIT1Q9H3H1 467 aaKnown RBP13.98□□□□□ -0.17
SNX1-214ENST00000625244 SERTAD1Q9UHV2 236 aa13.98□□□□□ -0.17
SNX1-214ENST00000625244 PCDHB3Q9Y5E6 796 aa13.98□□□□□ -0.17
SNX1-214ENST00000625244 RPS6KL1Q9Y6S9 549 aa13.98□□□□□ -0.17
SNX1-214ENST00000625244 MED13LQ71F56 2210 aa13.98□□□□□ -0.17
SNX1-214ENST00000625244 IGHV1OR21-1A0A087WYE8 117 aa13.97□□□□□ -0.17
SNX1-214ENST00000625244 ILVBLA1L0T0 632 aa13.97□□□□□ -0.17
SNX1-214ENST00000625244 GRAP2O75791 330 aa13.97□□□□□ -0.17
SNX1-214ENST00000625244 ECEL1O95672 775 aa13.97□□□□□ -0.17
SNX1-214ENST00000625244 DLGAP3O95886 979 aa13.97□□□□□ -0.17
SNX1-214ENST00000625244 FGF1P05230 155 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms