RNA–Protein interactions for RNA: ENST00000622166.1

IGHV3-54-201, Transcript of immunoglobulin heavy variable 3-54 (pseudogene), humanhuman

BASIC

Gene IGHV3-54, Length 353 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-54-201ENST00000622166 NDFIP2Q9NV92 336 aa9.68□□□□□ -0.86
IGHV3-54-201ENST00000622166 TMEM248Q9NWD8 314 aa9.68□□□□□ -0.86
IGHV3-54-201ENST00000622166 GTSE1Q9NYZ3 720 aa9.68□□□□□ -0.86
IGHV3-54-201ENST00000622166 SFMBT1Q9UHJ3 866 aa9.68□□□□□ -0.86
IGHV3-54-201ENST00000622166 RIMKLBQ9ULI2 386 aa9.68□□□□□ -0.86
IGHV3-54-201ENST00000622166 PADI4Q9UM07 663 aa9.68□□□□□ -0.86
IGHV3-54-201ENST00000622166 SCML2Q9UQR0 700 aa9.68□□□□□ -0.86
IGHV3-54-201ENST00000622166 TLR6Q9Y2C9 796 aa9.68□□□□□ -0.86
IGHV3-54-201ENST00000622166 PCDHGA7Q9Y5G6 932 aa9.68□□□□□ -0.86
IGHV3-54-201ENST00000622166 IGLV3-10A0A075B6K4 115 aa9.67□□□□□ -0.86
IGHV3-54-201ENST00000622166 C15orf38-AP3S2A0A0A6YYH1 394 aa9.67□□□□□ -0.86
IGHV3-54-201ENST00000622166 A0A1W2PQH9 124 aa9.67□□□□□ -0.86
IGHV3-54-201ENST00000622166 TMEM233B4DJY2 109 aa9.67□□□□□ -0.86
IGHV3-54-201ENST00000622166 AURKAO14965 403 aa9.67□□□□□ -0.86
IGHV3-54-201ENST00000622166 TRIM24O15164 1050 aa9.67□□□□□ -0.86
IGHV3-54-201ENST00000622166 MSI1O43347 362 aaKnown RBP9.67□□□□□ -0.86
IGHV3-54-201ENST00000622166 B3GAT3O94766 335 aa9.67□□□□□ -0.86
IGHV3-54-201ENST00000622166 CRTAMO95727 393 aa9.67□□□□□ -0.86
IGHV3-54-201ENST00000622166 S1PR4O95977 384 aa9.67□□□□□ -0.86
IGHV3-54-201ENST00000622166 POMCP01189 267 aa9.67□□□□□ -0.86
IGHV3-54-201ENST00000622166 MMP2P08253 660 aa9.67□□□□□ -0.86
IGHV3-54-201ENST00000622166 CHRM1P11229 460 aaPredicted RBP9.67□□□□□ -0.86
IGHV3-54-201ENST00000622166 KCNA5P22460 613 aa9.67□□□□□ -0.86
IGHV3-54-201ENST00000622166 GSTT1P30711 240 aa9.67□□□□□ -0.86
IGHV3-54-201ENST00000622166 PGFP49763 221 aa9.67□□□□□ -0.86
IGHV3-54-201ENST00000622166 SH3BGRP55822 239 aaPredicted RBP9.67□□□□□ -0.86
IGHV3-54-201ENST00000622166 POLE2P56282 527 aa9.67□□□□□ -0.86
IGHV3-54-201ENST00000622166 MRPS22P82650 360 aaKnown RBP9.67□□□□□ -0.86
IGHV3-54-201ENST00000622166 NFKB2Q00653 900 aa9.67□□□□□ -0.86
IGHV3-54-201ENST00000622166 ACVR1Q04771 509 aa9.67□□□□□ -0.86
IGHV3-54-201ENST00000622166 DYNC1I2Q13409 638 aaKnown RBP9.67□□□□□ -0.86
IGHV3-54-201ENST00000622166 USP41Q3LFD5 358 aa9.67□□□□□ -0.86
IGHV3-54-201ENST00000622166 ZNF789Q5FWF6 425 aa9.67□□□□□ -0.86
IGHV3-54-201ENST00000622166 FAM26DQ5JW98 314 aa9.67□□□□□ -0.86
IGHV3-54-201ENST00000622166 RASIP1Q5U651 963 aa9.67□□□□□ -0.86
IGHV3-54-201ENST00000622166 PIK3R6Q5UE93 754 aa9.67□□□□□ -0.86
IGHV3-54-201ENST00000622166 ZNF280DQ6N043 979 aa9.67□□□□□ -0.86
IGHV3-54-201ENST00000622166 FAM45BPQ6NSW5 357 aa9.67□□□□□ -0.86
IGHV3-54-201ENST00000622166 C8orf82Q6P1X6 216 aaPredicted RBP9.67□□□□□ -0.86
IGHV3-54-201ENST00000622166 C17orf99Q6UX52 265 aa9.67□□□□□ -0.86
IGHV3-54-201ENST00000622166 ARPINQ7Z6K5 226 aa9.67□□□□□ -0.86
IGHV3-54-201ENST00000622166 ZNF598Q86UK7 904 aaKnown RBP9.67□□□□□ -0.86
IGHV3-54-201ENST00000622166 CUZD1Q86UP6 607 aa9.67□□□□□ -0.86
IGHV3-54-201ENST00000622166 MON1AQ86VX9 555 aa9.67□□□□□ -0.86
IGHV3-54-201ENST00000622166 SPATA6LQ8N4H0 392 aa9.67□□□□□ -0.86
IGHV3-54-201ENST00000622166 BHLHE22Q8NFJ8 381 aaPredicted RBP9.67□□□□□ -0.86
IGHV3-54-201ENST00000622166 GPR150Q8NGU9 434 aa9.67□□□□□ -0.86
IGHV3-54-201ENST00000622166 RIN3Q8TB24 985 aa9.67□□□□□ -0.86
IGHV3-54-201ENST00000622166 FAM45AQ8TCE6 357 aa9.67□□□□□ -0.86
IGHV3-54-201ENST00000622166 PEX13Q92968 403 aa9.67□□□□□ -0.86
IGHV3-54-201ENST00000622166 USP13Q92995 863 aaPredicted RBP9.67□□□□□ -0.86
IGHV3-54-201ENST00000622166 ASB9Q96DX5 294 aa9.67□□□□□ -0.86
IGHV3-54-201ENST00000622166 SGF29Q96ES7 293 aa9.67□□□□□ -0.86
IGHV3-54-201ENST00000622166 MARK4Q96L34 752 aa9.67□□□□□ -0.86
IGHV3-54-201ENST00000622166 C8orf48Q96LL4 319 aa9.67□□□□□ -0.86
IGHV3-54-201ENST00000622166 GCNAQ96QF7 691 aa9.67□□□□□ -0.86
IGHV3-54-201ENST00000622166 UHRF1Q96T88 793 aaPredicted RBP9.67□□□□□ -0.86
IGHV3-54-201ENST00000622166 NPAS2Q99743 824 aa9.67□□□□□ -0.86
IGHV3-54-201ENST00000622166 PKP2Q99959 881 aa9.67□□□□□ -0.86
IGHV3-54-201ENST00000622166 SYT17Q9BSW7 474 aa9.67□□□□□ -0.86
IGHV3-54-201ENST00000622166 SLC2A11Q9BYW1 496 aa9.67□□□□□ -0.86
IGHV3-54-201ENST00000622166 ZCWPW1Q9H0M4 648 aa9.67□□□□□ -0.86
IGHV3-54-201ENST00000622166 ZNF696Q9H7X3 374 aa9.67□□□□□ -0.86
IGHV3-54-201ENST00000622166 IL37Q9NZH6 218 aa9.67□□□□□ -0.86
IGHV3-54-201ENST00000622166 CD300AQ9UGN4 299 aa9.67□□□□□ -0.86
IGHV3-54-201ENST00000622166 PACSIN3Q9UKS6 424 aa9.67□□□□□ -0.86
IGHV3-54-201ENST00000622166 PADI3Q9ULW8 664 aa9.67□□□□□ -0.86
IGHV3-54-201ENST00000622166 VWA7Q9Y334 891 aa9.67□□□□□ -0.86
IGHV3-54-201ENST00000622166 COMMD3-BMI1R4GMX3 469 aa9.67□□□□□ -0.86
IGHV3-54-201ENST00000622166 TANC1Q9C0D5 1861 aa9.67□□□□□ -0.86
IGHV3-54-201ENST00000622166 FRMPD3Q5JV73 1810 aa9.66□□□□□ -0.86
IGHV3-54-201ENST00000622166 LOC285095A0A1B0GVY8 99 aa9.66□□□□□ -0.86
IGHV3-54-201ENST00000622166 TCRBV3S1A0A5B6 114 aa9.66□□□□□ -0.86
IGHV3-54-201ENST00000622166 NEMP2A6NFY4 417 aa9.66□□□□□ -0.86
IGHV3-54-201ENST00000622166 DRGXA6NNA5 263 aa9.66□□□□□ -0.86
IGHV3-54-201ENST00000622166 STX16-NPEPL1H3BU86 382 aa9.66□□□□□ -0.86
IGHV3-54-201ENST00000622166 PSMD12O00232 456 aaPredicted RBP9.66□□□□□ -0.86
IGHV3-54-201ENST00000622166 FBP2O00757 339 aa9.66□□□□□ -0.86
IGHV3-54-201ENST00000622166 TXNDC9O14530 226 aa9.66□□□□□ -0.86
IGHV3-54-201ENST00000622166 TNPO2O14787 897 aaKnown RBP9.66□□□□□ -0.86
IGHV3-54-201ENST00000622166 UBDO15205 165 aa9.66□□□□□ -0.86
IGHV3-54-201ENST00000622166 SNRPB2P08579 225 aaKnown RBP9.66□□□□□ -0.86
IGHV3-54-201ENST00000622166 CTSHP09668 335 aa9.66□□□□□ -0.86
IGHV3-54-201ENST00000622166 CCDC166P0CW27 439 aa9.66□□□□□ -0.86
IGHV3-54-201ENST00000622166 HNRNPLP14866 589 aaKnown RBP eCLIP9.66□□□□□ -0.86
IGHV3-54-201ENST00000622166 FDXRP22570 491 aa9.66□□□□□ -0.86
IGHV3-54-201ENST00000622166 PMLP29590 882 aa9.66□□□□□ -0.86
IGHV3-54-201ENST00000622166 CD52P31358 61 aa9.66□□□□□ -0.86
IGHV3-54-201ENST00000622166 GRIK1P39086 918 aa9.66□□□□□ -0.86
IGHV3-54-201ENST00000622166 ACADVLP49748 655 aa9.66□□□□□ -0.86
IGHV3-54-201ENST00000622166 SUOXP51687 545 aa9.66□□□□□ -0.86
IGHV3-54-201ENST00000622166 TBX4P57082 545 aa9.66□□□□□ -0.86
IGHV3-54-201ENST00000622166 USP46P62068 366 aa9.66□□□□□ -0.86
IGHV3-54-201ENST00000622166 IL10RBQ08334 325 aa9.66□□□□□ -0.86
IGHV3-54-201ENST00000622166 LSAMPQ13449 338 aa9.66□□□□□ -0.86
IGHV3-54-201ENST00000622166 LAMB3Q13751 1172 aa9.66□□□□□ -0.86
IGHV3-54-201ENST00000622166 BTG3Q14201 252 aaPredicted RBP9.66□□□□□ -0.86
IGHV3-54-201ENST00000622166 TRIM25Q14258 630 aaKnown RBP9.66□□□□□ -0.86
IGHV3-54-201ENST00000622166 FASTKQ14296 549 aaKnown RBP9.66□□□□□ -0.86
IGHV3-54-201ENST00000622166 AGKQ53H12 422 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms