RNA–Protein interactions for RNA: ENST00000622020.4

NPHP4-211, Transcript of nephrocystin 4, humanhuman

TSL 5 BASIC

Gene NPHP4, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-211ENST00000622020 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.86■□□□□ 0.13
NPHP4-211ENST00000622020 TRAF6Q9Y4K3 522 aa15.86■□□□□ 0.13
NPHP4-211ENST00000622020 A0A0G2JLL6 359 aaPredicted RBP15.86■□□□□ 0.13
NPHP4-211ENST00000622020 ERI2A8K979 691 aaKnown RBP15.86■□□□□ 0.13
NPHP4-211ENST00000622020 IPO13O94829 963 aaKnown RBP15.86■□□□□ 0.13
NPHP4-211ENST00000622020 MTHFD1P11586 935 aaKnown RBP15.86■□□□□ 0.13
NPHP4-211ENST00000622020 SCNN1AP37088 669 aa15.86■□□□□ 0.13
NPHP4-211ENST00000622020 PSMD7P51665 324 aa15.86■□□□□ 0.13
NPHP4-211ENST00000622020 APLP1P51693 650 aa15.86■□□□□ 0.13
NPHP4-211ENST00000622020 PLCL1Q15111 1095 aa15.86■□□□□ 0.13
NPHP4-211ENST00000622020 SV2CQ496J9 727 aa15.86■□□□□ 0.13
NPHP4-211ENST00000622020 TWF2Q6IBS0 349 aaKnown RBP15.86■□□□□ 0.13
NPHP4-211ENST00000622020 PRRT2Q7Z6L0 340 aaPredicted RBP15.86■□□□□ 0.13
NPHP4-211ENST00000622020 ZNF354CQ86Y25 554 aa15.86■□□□□ 0.13
NPHP4-211ENST00000622020 HASPINQ8TF76 798 aa15.86■□□□□ 0.13
NPHP4-211ENST00000622020 PBXIP1Q96AQ6 731 aa15.86■□□□□ 0.13
NPHP4-211ENST00000622020 IGSF5Q9NSI5 407 aa15.86■□□□□ 0.13
NPHP4-211ENST00000622020 SMOXQ9NWM0 555 aa15.86■□□□□ 0.13
NPHP4-211ENST00000622020 SUCOQ9UBS9 1254 aaKnown RBP15.86■□□□□ 0.13
NPHP4-211ENST00000622020 ASB14A6NK59 587 aa15.85■□□□□ 0.13
NPHP4-211ENST00000622020 TRIM24O15164 1050 aa15.85■□□□□ 0.13
NPHP4-211ENST00000622020 NCAM2O15394 837 aa15.85■□□□□ 0.13
NPHP4-211ENST00000622020 GPR32O75388 356 aa15.85■□□□□ 0.13
NPHP4-211ENST00000622020 NCK1P16333 377 aa15.85■□□□□ 0.13
NPHP4-211ENST00000622020 MAGEA10P43363 369 aaPredicted RBP15.85■□□□□ 0.13
NPHP4-211ENST00000622020 RFTN1Q14699 578 aaPredicted RBP15.85■□□□□ 0.13
NPHP4-211ENST00000622020 PTPRCAPQ14761 206 aa15.85■□□□□ 0.13
NPHP4-211ENST00000622020 UGP2Q16851 508 aa15.85■□□□□ 0.13
NPHP4-211ENST00000622020 DENND5AQ6IQ26 1287 aa15.85■□□□□ 0.13
NPHP4-211ENST00000622020 TAC4Q86UU9 113 aa15.85■□□□□ 0.13
NPHP4-211ENST00000622020 DDIASQ8IXT1 998 aa15.85■□□□□ 0.13
NPHP4-211ENST00000622020 MAELQ96JY0 434 aaKnown RBP15.85■□□□□ 0.13
NPHP4-211ENST00000622020 MUC3BQ9H195 1237 aa15.85■□□□□ 0.13
NPHP4-211ENST00000622020 PNPLA3Q9NST1 481 aa15.85■□□□□ 0.13
NPHP4-211ENST00000622020 THEGQ9P2T0 379 aa15.85■□□□□ 0.13
NPHP4-211ENST00000622020 NRCAMQ92823 1304 aa15.85■□□□□ 0.13
NPHP4-211ENST00000622020 DYNC1LI2O43237 492 aaPredicted RBP15.85■□□□□ 0.13
NPHP4-211ENST00000622020 DDNO94850 711 aaPredicted RBP15.85■□□□□ 0.13
NPHP4-211ENST00000622020 FAM163BP0C2L3 166 aa15.85■□□□□ 0.13
NPHP4-211ENST00000622020 SMPD1P17405 629 aa15.85■□□□□ 0.13
NPHP4-211ENST00000622020 OXTRP30559 389 aa15.85■□□□□ 0.13
NPHP4-211ENST00000622020 SLC7A1P30825 629 aa15.85■□□□□ 0.13
NPHP4-211ENST00000622020 TXNL4AP83876 142 aaKnown RBP15.85■□□□□ 0.13
NPHP4-211ENST00000622020 CACNB2Q08289 660 aaPredicted RBP15.85■□□□□ 0.13
NPHP4-211ENST00000622020 KCTD21Q4G0X4 260 aa15.85■□□□□ 0.13
NPHP4-211ENST00000622020 GPR107Q5VW38 600 aa15.85■□□□□ 0.13
NPHP4-211ENST00000622020 ANKRD23Q86SG2 305 aa15.85■□□□□ 0.13
NPHP4-211ENST00000622020 TMEM126BQ8IUX1 230 aa15.85■□□□□ 0.13
NPHP4-211ENST00000622020 SHCBP1Q8NEM2 672 aa15.85■□□□□ 0.13
NPHP4-211ENST00000622020 SCAMP5Q8TAC9 235 aa15.85■□□□□ 0.13
NPHP4-211ENST00000622020 DNAI2Q9GZS0 605 aa15.85■□□□□ 0.13
NPHP4-211ENST00000622020 UPF3AQ9H1J1 476 aaKnown RBP15.85■□□□□ 0.13
NPHP4-211ENST00000622020 CLK4Q9HAZ1 481 aaKnown RBP15.85■□□□□ 0.13
NPHP4-211ENST00000622020 TIMMDC1Q9NPL8 285 aa15.85■□□□□ 0.13
NPHP4-211ENST00000622020 BTRCQ9Y297 605 aa15.85■□□□□ 0.13
NPHP4-211ENST00000622020 C8BP07358 591 aa15.84■□□□□ 0.13
NPHP4-211ENST00000622020 ALDOCP09972 364 aaKnown RBP15.84■□□□□ 0.13
NPHP4-211ENST00000622020 CDK9P50750 372 aaKnown RBP15.84■□□□□ 0.13
NPHP4-211ENST00000622020 HABP4Q5JVS0 413 aaKnown RBP15.84■□□□□ 0.13
NPHP4-211ENST00000622020 GPR141Q7Z602 305 aa15.84■□□□□ 0.13
NPHP4-211ENST00000622020 FUNDC1Q8IVP5 155 aa15.84■□□□□ 0.13
NPHP4-211ENST00000622020 OR6J1Q8NGC5 347 aa15.84■□□□□ 0.13
NPHP4-211ENST00000622020 DNAJB14Q8TBM8 379 aa15.84■□□□□ 0.13
NPHP4-211ENST00000622020 PAAF1Q9BRP4 392 aa15.84■□□□□ 0.13
NPHP4-211ENST00000622020 NAA50Q9GZZ1 169 aaKnown RBP15.84■□□□□ 0.13
NPHP4-211ENST00000622020 GDAP2Q9NXN4 497 aa15.84■□□□□ 0.13
NPHP4-211ENST00000622020 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.84■□□□□ 0.13
NPHP4-211ENST00000622020 BOLA2-SMG1P6H3BVE0 249 aa15.84■□□□□ 0.13
NPHP4-211ENST00000622020 HLA-DQB2P05538 268 aa15.84■□□□□ 0.13
NPHP4-211ENST00000622020 ADSLP30566 484 aaPredicted RBP15.84■□□□□ 0.13
NPHP4-211ENST00000622020 HADHAP40939 763 aa15.84■□□□□ 0.13
NPHP4-211ENST00000622020 SLC5A3P53794 718 aa15.84■□□□□ 0.13
NPHP4-211ENST00000622020 FOXA1P55317 472 aa15.84■□□□□ 0.13
NPHP4-211ENST00000622020 ECT2LQ008S8 904 aa15.84■□□□□ 0.13
NPHP4-211ENST00000622020 SQLEQ14534 574 aa15.84■□□□□ 0.13
NPHP4-211ENST00000622020 NHSL2Q5HYW2 709 aa15.84■□□□□ 0.13
NPHP4-211ENST00000622020 SCIMPQ6UWF3 145 aa15.84■□□□□ 0.13
NPHP4-211ENST00000622020 XKR5Q6UX68 686 aa15.84■□□□□ 0.13
NPHP4-211ENST00000622020 LINC00523Q86TU6 105 aa15.84■□□□□ 0.13
NPHP4-211ENST00000622020 ERI1Q8IV48 349 aaKnown RBP15.84■□□□□ 0.13
NPHP4-211ENST00000622020 RBM12BQ8IXT5 1001 aaKnown RBP15.84■□□□□ 0.13
NPHP4-211ENST00000622020 C12orf43Q96C57 262 aaKnown RBP15.84■□□□□ 0.13
NPHP4-211ENST00000622020 ERLEC1Q96DZ1 483 aa15.84■□□□□ 0.13
NPHP4-211ENST00000622020 EFHD1Q9BUP0 239 aa15.84■□□□□ 0.13
NPHP4-211ENST00000622020 SLC39A8Q9C0K1 460 aa15.84■□□□□ 0.13
NPHP4-211ENST00000622020 DOLKQ9UPQ8 538 aa15.84■□□□□ 0.13
NPHP4-211ENST00000622020 DERAQ9Y315 318 aa15.84■□□□□ 0.13
NPHP4-211ENST00000622020 IPPQ9Y573 584 aa15.84■□□□□ 0.13
NPHP4-211ENST00000622020 KCTD3Q9Y597 815 aa15.84■□□□□ 0.13
NPHP4-211ENST00000622020 TTC3P53804 2025 aa15.84■□□□□ 0.13
NPHP4-211ENST00000622020 NPHS1O60500 1241 aa15.84■□□□□ 0.13
NPHP4-211ENST00000622020 BDNFP23560 247 aa15.84■□□□□ 0.13
NPHP4-211ENST00000622020 CSRP3P50461 194 aa15.84■□□□□ 0.13
NPHP4-211ENST00000622020 NEDD8Q15843 81 aa15.84■□□□□ 0.13
NPHP4-211ENST00000622020 CYHR1Q6ZMK1 362 aa15.84■□□□□ 0.13
NPHP4-211ENST00000622020 BNIPLQ7Z465 357 aa15.84■□□□□ 0.13
NPHP4-211ENST00000622020 LPPQ93052 612 aa15.84■□□□□ 0.13
NPHP4-211ENST00000622020 SENP8Q96LD8 212 aa15.84■□□□□ 0.13
NPHP4-211ENST00000622020 KLHL5Q96PQ7 755 aa15.84■□□□□ 0.13
NPHP4-211ENST00000622020 OAZ3Q9UMX2 235 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms