RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 YWHAQP27348 245 aa19.7■□□□□ 0.74
PDLIM3-212ENST00000620787 PNPLA4P41247 253 aa19.7■□□□□ 0.74
PDLIM3-212ENST00000620787 ESRRGP62508 458 aa19.7■□□□□ 0.74
PDLIM3-212ENST00000620787 INTS11Q5TA45 600 aaKnown RBP19.7■□□□□ 0.74
PDLIM3-212ENST00000620787 ARMCX2Q7L311 632 aa19.7■□□□□ 0.74
PDLIM3-212ENST00000620787 FUNDC1Q8IVP5 155 aa19.7■□□□□ 0.74
PDLIM3-212ENST00000620787 ZNF786Q8N393 782 aa19.7■□□□□ 0.74
PDLIM3-212ENST00000620787 CBR4Q8N4T8 237 aa19.7■□□□□ 0.74
PDLIM3-212ENST00000620787 IPMKQ8NFU5 416 aa19.7■□□□□ 0.74
PDLIM3-212ENST00000620787 PPTC7Q8NI37 304 aa19.7■□□□□ 0.74
PDLIM3-212ENST00000620787 ZNF419Q96HQ0 510 aaPredicted RBP19.7■□□□□ 0.74
PDLIM3-212ENST00000620787 CCM2LQ9NUG4 571 aaPredicted RBP19.7■□□□□ 0.74
PDLIM3-212ENST00000620787 OR12D3Q9UGF7 316 aa19.7■□□□□ 0.74
PDLIM3-212ENST00000620787 CDH7Q9ULB5 785 aa19.7■□□□□ 0.74
PDLIM3-212ENST00000620787 AAR2Q9Y312 384 aaKnown RBP19.7■□□□□ 0.74
PDLIM3-212ENST00000620787 LRIG2O94898 1065 aa19.69■□□□□ 0.74
PDLIM3-212ENST00000620787 NME5P56597 212 aa19.69■□□□□ 0.74
PDLIM3-212ENST00000620787 SV2CQ496J9 727 aa19.69■□□□□ 0.74
PDLIM3-212ENST00000620787 TAPT1Q6NXT6 567 aa19.69■□□□□ 0.74
PDLIM3-212ENST00000620787 NOTUMQ6P988 496 aa19.69■□□□□ 0.74
PDLIM3-212ENST00000620787 TTC33Q6PID6 262 aaPredicted RBP19.69■□□□□ 0.74
PDLIM3-212ENST00000620787 DLK2Q6UY11 383 aa19.69■□□□□ 0.74
PDLIM3-212ENST00000620787 ARHGAP36Q6ZRI8 547 aa19.69■□□□□ 0.74
PDLIM3-212ENST00000620787 RETREG3Q86VR2 466 aa19.69■□□□□ 0.74
PDLIM3-212ENST00000620787 ERO1BQ86YB8 467 aa19.69■□□□□ 0.74
PDLIM3-212ENST00000620787 SULF1Q8IWU6 871 aa19.69■□□□□ 0.74
PDLIM3-212ENST00000620787 ZUFSPQ96AP4 578 aa19.69■□□□□ 0.74
PDLIM3-212ENST00000620787 PGAP3Q96FM1 320 aaPredicted RBP19.69■□□□□ 0.74
PDLIM3-212ENST00000620787 FICDQ9BVA6 458 aa19.69■□□□□ 0.74
PDLIM3-212ENST00000620787 RHOBTB2Q9BYZ6 727 aa19.69■□□□□ 0.74
PDLIM3-212ENST00000620787 FBXO5Q9UKT4 447 aa19.69■□□□□ 0.74
PDLIM3-212ENST00000620787 CDC14AQ9UNH5 594 aa19.69■□□□□ 0.74
PDLIM3-212ENST00000620787 TDRKHQ9Y2W6 561 aaKnown RBP19.69■□□□□ 0.74
PDLIM3-212ENST00000620787 A0A0G2JLL6 359 aaPredicted RBP19.69■□□□□ 0.74
PDLIM3-212ENST00000620787 H3BRB1 525 aa19.69■□□□□ 0.74
PDLIM3-212ENST00000620787 NCAM1P13591 858 aa19.69■□□□□ 0.74
PDLIM3-212ENST00000620787 ATP4BP51164 291 aa19.69■□□□□ 0.74
PDLIM3-212ENST00000620787 PLK1P53350 603 aa19.69■□□□□ 0.74
PDLIM3-212ENST00000620787 SLC12A2P55011 1212 aa19.69■□□□□ 0.74
PDLIM3-212ENST00000620787 C16orf72Q14CZ0 275 aa19.69■□□□□ 0.74
PDLIM3-212ENST00000620787 ARL13BQ3SXY8 428 aa19.69■□□□□ 0.74
PDLIM3-212ENST00000620787 ZNF772Q68DY9 489 aaPredicted RBP19.69■□□□□ 0.74
PDLIM3-212ENST00000620787 LARP4Q71RC2 724 aaKnown RBP eCLIP19.69■□□□□ 0.74
PDLIM3-212ENST00000620787 GPRIN1Q7Z2K8 1008 aa19.69■□□□□ 0.74
PDLIM3-212ENST00000620787 PRRT2Q7Z6L0 340 aaPredicted RBP19.69■□□□□ 0.74
PDLIM3-212ENST00000620787 CTU1Q7Z7A3 348 aaKnown RBP19.69■□□□□ 0.74
PDLIM3-212ENST00000620787 RNF135Q8IUD6 432 aa19.69■□□□□ 0.74
PDLIM3-212ENST00000620787 TNIP2Q8NFZ5 429 aa19.69■□□□□ 0.74
PDLIM3-212ENST00000620787 CCDC126Q96EE4 140 aa19.69■□□□□ 0.74
PDLIM3-212ENST00000620787 OLFM1Q99784 485 aa19.69■□□□□ 0.74
PDLIM3-212ENST00000620787 MED10Q9BTT4 135 aa19.69■□□□□ 0.74
PDLIM3-212ENST00000620787 ADI1Q9BV57 179 aa19.69■□□□□ 0.74
PDLIM3-212ENST00000620787 COLEC11Q9BWP8 271 aa19.69■□□□□ 0.74
PDLIM3-212ENST00000620787 TUT1Q9H6E5 874 aaKnown RBP19.69■□□□□ 0.74
PDLIM3-212ENST00000620787 TREX1Q9NSU2 369 aa19.69■□□□□ 0.74
PDLIM3-212ENST00000620787 MTF2Q9Y483 593 aaPredicted RBP19.69■□□□□ 0.74
PDLIM3-212ENST00000620787 NME4O00746 187 aa19.68■□□□□ 0.74
PDLIM3-212ENST00000620787 UBFD1O14562 309 aaKnown RBP19.68■□□□□ 0.74
PDLIM3-212ENST00000620787 STAMBPO95630 424 aa19.68■□□□□ 0.74
PDLIM3-212ENST00000620787 UGT1A6P19224 532 aa19.68■□□□□ 0.74
PDLIM3-212ENST00000620787 EN1Q05925 392 aaPredicted RBP19.68■□□□□ 0.74
PDLIM3-212ENST00000620787 FAM83EQ2M2I3 478 aa19.68■□□□□ 0.74
PDLIM3-212ENST00000620787 KIAA0319Q5VV43 1072 aa19.68■□□□□ 0.74
PDLIM3-212ENST00000620787 PATL1Q86TB9 770 aaKnown RBP19.68■□□□□ 0.74
PDLIM3-212ENST00000620787 ROPN1LQ96C74 230 aa19.68■□□□□ 0.74
PDLIM3-212ENST00000620787 LRCH3Q96II8 777 aa19.68■□□□□ 0.74
PDLIM3-212ENST00000620787 GPATCH1Q9BRR8 931 aaKnown RBP19.68■□□□□ 0.74
PDLIM3-212ENST00000620787 DCUN1D5Q9BTE7 237 aa19.68■□□□□ 0.74
PDLIM3-212ENST00000620787 HIPK3Q9H422 1215 aa19.68■□□□□ 0.74
PDLIM3-212ENST00000620787 GSTO2Q9H4Y5 243 aa19.68■□□□□ 0.74
PDLIM3-212ENST00000620787 FBRSL1Q9HCM7 1045 aaKnown RBP19.68■□□□□ 0.74
PDLIM3-212ENST00000620787 TRAF6Q9Y4K3 522 aa19.68■□□□□ 0.74
PDLIM3-212ENST00000620787 UNCXA6NJT0 531 aa19.68■□□□□ 0.74
PDLIM3-212ENST00000620787 TMX2-CTNND1H3BSU7 103 aa19.68■□□□□ 0.74
PDLIM3-212ENST00000620787 MT-CO1P00395 513 aa19.68■□□□□ 0.74
PDLIM3-212ENST00000620787 ACADVLP49748 655 aa19.68■□□□□ 0.74
PDLIM3-212ENST00000620787 LILRA4P59901 499 aa19.68■□□□□ 0.74
PDLIM3-212ENST00000620787 CCNA1P78396 465 aa19.68■□□□□ 0.74
PDLIM3-212ENST00000620787 GALNT1Q10472 559 aaPredicted RBP19.68■□□□□ 0.74
PDLIM3-212ENST00000620787 TBCELQ5QJ74 424 aa19.68■□□□□ 0.74
PDLIM3-212ENST00000620787 CLEC6AQ6EIG7 209 aa19.68■□□□□ 0.74
PDLIM3-212ENST00000620787 CAMK1DQ8IU85 385 aa19.68■□□□□ 0.74
PDLIM3-212ENST00000620787 SHCBP1Q8NEM2 672 aa19.68■□□□□ 0.74
PDLIM3-212ENST00000620787 FCRL5Q96RD9 977 aa19.68■□□□□ 0.74
PDLIM3-212ENST00000620787 NPLQ9BXD5 320 aaPredicted RBP19.68■□□□□ 0.74
PDLIM3-212ENST00000620787 ALDOCP09972 364 aaKnown RBP19.67■□□□□ 0.74
PDLIM3-212ENST00000620787 GPX3P22352 226 aa19.67■□□□□ 0.74
PDLIM3-212ENST00000620787 MAP7D1Q3KQU3 841 aa19.67■□□□□ 0.74
PDLIM3-212ENST00000620787 ZNF789Q5FWF6 425 aa19.67■□□□□ 0.74
PDLIM3-212ENST00000620787 LYSMD3Q7Z3D4 306 aa19.67■□□□□ 0.74
PDLIM3-212ENST00000620787 CCDC117Q8IWD4 279 aaPredicted RBP19.67■□□□□ 0.74
PDLIM3-212ENST00000620787 TOP6BLQ8N6T0 577 aa19.67■□□□□ 0.74
PDLIM3-212ENST00000620787 PHF21BQ96EK2 531 aa19.67■□□□□ 0.74
PDLIM3-212ENST00000620787 TKTL2Q9H0I9 626 aa19.67■□□□□ 0.74
PDLIM3-212ENST00000620787 MUC3BQ9H195 1237 aa19.67■□□□□ 0.74
PDLIM3-212ENST00000620787 AGPAT4Q9NRZ5 378 aa19.67■□□□□ 0.74
PDLIM3-212ENST00000620787 ATP6AP2A0A1C7CYW4 349 aa19.66■□□□□ 0.74
PDLIM3-212ENST00000620787 ASB14A6NK59 587 aa19.66■□□□□ 0.74
PDLIM3-212ENST00000620787 ATP6AP2O75787 350 aa19.66■□□□□ 0.74
PDLIM3-212ENST00000620787 ATE1O95260 518 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms