RNA–Protein interactions for RNA: ENST00000620709.4

CD40-207, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-207ENST00000620709 CCNHP51946 323 aaPredicted RBP16.31■□□□□ 0.2
CD40-207ENST00000620709 NEK3P51956 506 aa16.31■□□□□ 0.2
CD40-207ENST00000620709 CYP4F3Q08477 520 aa16.31■□□□□ 0.2
CD40-207ENST00000620709 OVGP1Q12889 678 aa16.31■□□□□ 0.2
CD40-207ENST00000620709 TFDP3Q5H9I0 405 aa16.31■□□□□ 0.2
CD40-207ENST00000620709 NEK5Q6P3R8 708 aa16.31■□□□□ 0.2
CD40-207ENST00000620709 MFSD7Q6UXD7 560 aa16.31■□□□□ 0.2
CD40-207ENST00000620709 HSPH1Q92598 858 aa16.31■□□□□ 0.2
CD40-207ENST00000620709 TBC1D31Q96DN5 1066 aa16.31■□□□□ 0.2
CD40-207ENST00000620709 LRRC1Q9BTT6 524 aa16.31■□□□□ 0.2
CD40-207ENST00000620709 HDAC8Q9BY41 377 aa16.31■□□□□ 0.2
CD40-207ENST00000620709 ZFR2Q9UPR6 939 aaKnown RBP16.31■□□□□ 0.2
CD40-207ENST00000620709 RAXQ9Y2V3 346 aa16.31■□□□□ 0.2
CD40-207ENST00000620709 NBEAQ8NFP9 2946 aa16.31■□□□□ 0.2
CD40-207ENST00000620709 LAMA5O15230 3695 aa16.3■□□□□ 0.2
CD40-207ENST00000620709 ZNF821O75541 412 aaPredicted RBP16.3■□□□□ 0.2
CD40-207ENST00000620709 LRIG2O94898 1065 aa16.3■□□□□ 0.2
CD40-207ENST00000620709 CAPNS1P04632 268 aa16.3■□□□□ 0.2
CD40-207ENST00000620709 RHOQP17081 205 aa16.3■□□□□ 0.2
CD40-207ENST00000620709 HNRNPA2B1P22626 353 aaKnown RBP16.3■□□□□ 0.2
CD40-207ENST00000620709 KDELR1P24390 212 aa16.3■□□□□ 0.2
CD40-207ENST00000620709 ETFBP38117 255 aa16.3■□□□□ 0.2
CD40-207ENST00000620709 MAPKAPK2P49137 400 aa16.3■□□□□ 0.2
CD40-207ENST00000620709 SIX1Q15475 284 aaPredicted RBP16.3■□□□□ 0.2
CD40-207ENST00000620709 SMAD1Q15797 465 aaKnown RBP16.3■□□□□ 0.2
CD40-207ENST00000620709 CYP1B1Q16678 543 aa16.3■□□□□ 0.2
CD40-207ENST00000620709 CYP4V2Q6ZWL3 525 aaPredicted RBP16.3■□□□□ 0.2
CD40-207ENST00000620709 PTAR1Q7Z6K3 402 aaPredicted RBP16.3■□□□□ 0.2
CD40-207ENST00000620709 KCTD6Q8NC69 237 aa16.3■□□□□ 0.2
CD40-207ENST00000620709 OR13H1Q8NG92 308 aa16.3■□□□□ 0.2
CD40-207ENST00000620709 ANKRD7Q92527 254 aa16.3■□□□□ 0.2
CD40-207ENST00000620709 ARHGEF2Q92974 986 aaKnown RBP16.3■□□□□ 0.2
CD40-207ENST00000620709 RUNDC3BQ96NL0 473 aa16.3■□□□□ 0.2
CD40-207ENST00000620709 PARD6BQ9BYG5 372 aa16.3■□□□□ 0.2
CD40-207ENST00000620709 DDX47Q9H0S4 455 aaKnown RBP16.3■□□□□ 0.2
CD40-207ENST00000620709 OSBPL2Q9H1P3 480 aa16.3■□□□□ 0.2
CD40-207ENST00000620709 EFR3BQ9Y2G0 817 aa16.3■□□□□ 0.2
CD40-207ENST00000620709 ZFYVE26Q68DK2 2539 aa16.3■□□□□ 0.2
CD40-207ENST00000620709 TDRD6O60522 2096 aaKnown RBP16.3■□□□□ 0.2
CD40-207ENST00000620709 hCG_1818297A0A087WSY0 165 aa16.29■□□□□ 0.2
CD40-207ENST00000620709 TCRBV7S2A1N4TA0A589 114 aa16.29■□□□□ 0.2
CD40-207ENST00000620709 C3orf70A6NLC5 250 aaPredicted RBP16.29■□□□□ 0.2
CD40-207ENST00000620709 NEMP1O14524 444 aa16.29■□□□□ 0.2
CD40-207ENST00000620709 FFAR2O15552 330 aa16.29■□□□□ 0.2
CD40-207ENST00000620709 RAMP2O60895 175 aa16.29■□□□□ 0.2
CD40-207ENST00000620709 TJP3O95049 919 aa16.29■□□□□ 0.2
CD40-207ENST00000620709 ADRB3P13945 408 aa16.29■□□□□ 0.2
CD40-207ENST00000620709 MCM3P25205 808 aa16.29■□□□□ 0.2
CD40-207ENST00000620709 ITGB7P26010 798 aa16.29■□□□□ 0.2
CD40-207ENST00000620709 L1CAMP32004 1257 aa16.29■□□□□ 0.2
CD40-207ENST00000620709 CDKN2BP42772 138 aa16.29■□□□□ 0.2
CD40-207ENST00000620709 KLF1Q13351 362 aaPredicted RBP16.29■□□□□ 0.2
CD40-207ENST00000620709 POLD3Q15054 466 aaPredicted RBP16.29■□□□□ 0.2
CD40-207ENST00000620709 PDK2Q15119 407 aa16.29■□□□□ 0.2
CD40-207ENST00000620709 LLGL1Q15334 1064 aa16.29■□□□□ 0.2
CD40-207ENST00000620709 MAP7D3Q8IWC1 876 aa16.29■□□□□ 0.2
CD40-207ENST00000620709 PRELID2Q8N945 189 aa16.29■□□□□ 0.2
CD40-207ENST00000620709 MAGOHBQ96A72 148 aaKnown RBP16.29■□□□□ 0.2
CD40-207ENST00000620709 SNRNP25Q9BV90 132 aaKnown RBP16.29■□□□□ 0.2
CD40-207ENST00000620709 HEMGNQ9BXL5 484 aa16.29■□□□□ 0.2
CD40-207ENST00000620709 HOMER3Q9NSC5 361 aa16.29■□□□□ 0.2
CD40-207ENST00000620709 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.29■□□□□ 0.2
CD40-207ENST00000620709 TMEM248Q9NWD8 314 aa16.29■□□□□ 0.2
CD40-207ENST00000620709 COL5A1P20908 1838 aaPredicted RBP16.29■□□□□ 0.2
CD40-207ENST00000620709 CREB3O43889 395 aa16.29■□□□□ 0.2
CD40-207ENST00000620709 PAK4O96013 591 aaPredicted RBP16.29■□□□□ 0.2
CD40-207ENST00000620709 HNF1BP35680 557 aa16.29■□□□□ 0.2
CD40-207ENST00000620709 FNTAP49354 379 aa16.29■□□□□ 0.2
CD40-207ENST00000620709 ACADVLP49748 655 aa16.29■□□□□ 0.2
CD40-207ENST00000620709 CDH6P55285 790 aa16.29■□□□□ 0.2
CD40-207ENST00000620709 RPS21P63220 83 aaKnown RBP16.29■□□□□ 0.2
CD40-207ENST00000620709 KRT81Q14533 505 aa16.29■□□□□ 0.2
CD40-207ENST00000620709 TAZQ16635 292 aa16.29■□□□□ 0.2
CD40-207ENST00000620709 ZNF542PQ5EBM4 170 aa16.29■□□□□ 0.2
CD40-207ENST00000620709 EFHC2Q5JST6 749 aa16.29■□□□□ 0.2
CD40-207ENST00000620709 ERMARDQ5T6L9 678 aa16.29■□□□□ 0.2
CD40-207ENST00000620709 MANEALQ5VSG8 457 aa16.29■□□□□ 0.2
CD40-207ENST00000620709 PARS2Q7L3T8 475 aaKnown RBP16.29■□□□□ 0.2
CD40-207ENST00000620709 MAATS1Q7Z4T9 603 aa16.29■□□□□ 0.2
CD40-207ENST00000620709 NLRP14Q86W24 1093 aa16.29■□□□□ 0.2
CD40-207ENST00000620709 TMPRSS12Q86WS5 348 aa16.29■□□□□ 0.2
CD40-207ENST00000620709 VSIG1Q86XK7 387 aa16.29■□□□□ 0.2
CD40-207ENST00000620709 PYROXD2Q8N2H3 581 aa16.29■□□□□ 0.2
CD40-207ENST00000620709 PDCD7Q8N8D1 485 aaKnown RBP16.29■□□□□ 0.2
CD40-207ENST00000620709 TMEM145Q8NBT3 493 aa16.29■□□□□ 0.2
CD40-207ENST00000620709 NETO2Q8NC67 525 aa16.29■□□□□ 0.2
CD40-207ENST00000620709 HNRNPLLQ8WVV9 542 aaKnown RBP16.29■□□□□ 0.2
CD40-207ENST00000620709 FEM1CQ96JP0 617 aa16.29■□□□□ 0.2
CD40-207ENST00000620709 HERPUD2Q9BSE4 406 aa16.29■□□□□ 0.2
CD40-207ENST00000620709 MAGEH1Q9H213 219 aa16.29■□□□□ 0.2
CD40-207ENST00000620709 CAAP1Q9H8G2 361 aa16.29■□□□□ 0.2
CD40-207ENST00000620709 ARGLU1Q9NWB6 273 aaPredicted RBP16.29■□□□□ 0.2
CD40-207ENST00000620709 RAB21Q9UL25 225 aa16.29■□□□□ 0.2
CD40-207ENST00000620709 PCDHGA1Q9Y5H4 931 aa16.29■□□□□ 0.2
CD40-207ENST00000620709 RAD51CO43502 376 aa16.28■□□□□ 0.2
CD40-207ENST00000620709 SIGLEC6O43699 453 aa16.28■□□□□ 0.2
CD40-207ENST00000620709 CD160O95971 181 aa16.28■□□□□ 0.2
CD40-207ENST00000620709 EPHB2P29323 1055 aa16.28■□□□□ 0.2
CD40-207ENST00000620709 ARSEP51690 589 aa16.28■□□□□ 0.2
CD40-207ENST00000620709 GEMIN4P57678 1058 aaKnown RBP16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms