RNA–Protein interactions for RNA: ENST00000620675.4

NEK3-210, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-210ENST00000620675 ADRA1AP35348 466 aa13.72□□□□□ -0.21
NEK3-210ENST00000620675 NEK3P51956 506 aa13.72□□□□□ -0.21
NEK3-210ENST00000620675 PPP2CBP62714 309 aa13.72□□□□□ -0.21
NEK3-210ENST00000620675 PPP2CAP67775 309 aa13.72□□□□□ -0.21
NEK3-210ENST00000620675 DR1Q01658 176 aa13.72□□□□□ -0.21
NEK3-210ENST00000620675 CDK18Q07002 472 aa13.72□□□□□ -0.21
NEK3-210ENST00000620675 MTM1Q13496 603 aa13.72□□□□□ -0.21
NEK3-210ENST00000620675 QPCTQ16769 361 aa13.72□□□□□ -0.21
NEK3-210ENST00000620675 ANKRD22Q5VYY1 191 aa13.72□□□□□ -0.21
NEK3-210ENST00000620675 TSPAN33Q86UF1 283 aa13.72□□□□□ -0.21
NEK3-210ENST00000620675 WDR5BQ86VZ2 330 aa13.72□□□□□ -0.21
NEK3-210ENST00000620675 JAMLQ86YT9 394 aa13.72□□□□□ -0.21
NEK3-210ENST00000620675 PAF1Q8N7H5 531 aa13.72□□□□□ -0.21
NEK3-210ENST00000620675 PPP1R16AQ96I34 528 aa13.72□□□□□ -0.21
NEK3-210ENST00000620675 GPR174Q9BXC1 333 aa13.72□□□□□ -0.21
NEK3-210ENST00000620675 C6orf106Q9H6K1 298 aaPredicted RBP13.72□□□□□ -0.21
NEK3-210ENST00000620675 PAK5Q9P286 719 aa13.72□□□□□ -0.21
NEK3-210ENST00000620675 SLCO1B1Q9Y6L6 691 aa13.72□□□□□ -0.21
NEK3-210ENST00000620675 LOC285095A0A1B0GVY8 99 aa13.71□□□□□ -0.21
NEK3-210ENST00000620675 NPIPB15A6NHN6 443 aaPredicted RBP13.71□□□□□ -0.21
NEK3-210ENST00000620675 AREL1O15033 823 aa13.71□□□□□ -0.21
NEK3-210ENST00000620675 CES1P23141 567 aa13.71□□□□□ -0.21
NEK3-210ENST00000620675 BASP1P80723 227 aaKnown RBP13.71□□□□□ -0.21
NEK3-210ENST00000620675 GRM3Q14832 879 aa13.71□□□□□ -0.21
NEK3-210ENST00000620675 PPP1R7Q15435 360 aa13.71□□□□□ -0.21
NEK3-210ENST00000620675 SIRPB2Q5JXA9 342 aa13.71□□□□□ -0.21
NEK3-210ENST00000620675 CFAP58Q5T655 872 aa13.71□□□□□ -0.21
NEK3-210ENST00000620675 DENND5AQ6IQ26 1287 aa13.71□□□□□ -0.21
NEK3-210ENST00000620675 MICALCLQ6ZW33 695 aa13.71□□□□□ -0.21
NEK3-210ENST00000620675 USP30Q70CQ3 517 aa13.71□□□□□ -0.21
NEK3-210ENST00000620675 LONP2Q86WA8 852 aa13.71□□□□□ -0.21
NEK3-210ENST00000620675 SLCO2A1Q92959 643 aa13.71□□□□□ -0.21
NEK3-210ENST00000620675 TRIM31Q9BZY9 425 aa13.71□□□□□ -0.21
NEK3-210ENST00000620675 FADS3Q9Y5Q0 445 aa13.71□□□□□ -0.21
NEK3-210ENST00000620675 TDRD6O60522 2096 aaKnown RBP13.71□□□□□ -0.21
NEK3-210ENST00000620675 RIOK3O14730 519 aaKnown RBP13.71□□□□□ -0.21
NEK3-210ENST00000620675 PLRG1O43660 514 aaKnown RBP13.71□□□□□ -0.21
NEK3-210ENST00000620675 APRTP07741 180 aa13.71□□□□□ -0.21
NEK3-210ENST00000620675 LHCGRP22888 699 aa13.71□□□□□ -0.21
NEK3-210ENST00000620675 IVDP26440 423 aa13.71□□□□□ -0.21
NEK3-210ENST00000620675 GEMP55040 296 aa13.71□□□□□ -0.21
NEK3-210ENST00000620675 FAM193AP78312 1265 aa13.71□□□□□ -0.21
NEK3-210ENST00000620675 CKAP4Q07065 602 aaKnown RBP13.71□□□□□ -0.21
NEK3-210ENST00000620675 MPP3Q13368 585 aa13.71□□□□□ -0.21
NEK3-210ENST00000620675 SEMA5AQ13591 1074 aa13.71□□□□□ -0.21
NEK3-210ENST00000620675 PTK6Q13882 451 aa13.71□□□□□ -0.21
NEK3-210ENST00000620675 TRADDQ15628 312 aa13.71□□□□□ -0.21
NEK3-210ENST00000620675 SEL1L3Q68CR1 1132 aa13.71□□□□□ -0.21
NEK3-210ENST00000620675 BRAT1Q6PJG6 821 aa13.71□□□□□ -0.21
NEK3-210ENST00000620675 KDM7AQ6ZMT4 941 aa13.71□□□□□ -0.21
NEK3-210ENST00000620675 ZBTB44Q8NCP5 570 aa13.71□□□□□ -0.21
NEK3-210ENST00000620675 KLK6Q92876 244 aa13.71□□□□□ -0.21
NEK3-210ENST00000620675 WRAP53Q9BUR4 548 aaKnown RBP13.71□□□□□ -0.21
NEK3-210ENST00000620675 L2HGDHQ9H9P8 463 aa13.71□□□□□ -0.21
NEK3-210ENST00000620675 EBF2Q9HAK2 575 aa13.71□□□□□ -0.21
NEK3-210ENST00000620675 VPS45Q9NRW7 570 aa13.71□□□□□ -0.21
NEK3-210ENST00000620675 B4GALT6Q9UBX8 382 aa13.71□□□□□ -0.21
NEK3-210ENST00000620675 RAPGEFL1Q9UHV5 662 aa13.71□□□□□ -0.21
NEK3-210ENST00000620675 SCML1Q9UN30 329 aa13.71□□□□□ -0.21
NEK3-210ENST00000620675 ZFR2Q9UPR6 939 aaKnown RBP13.71□□□□□ -0.21
NEK3-210ENST00000620675 COQ6Q9Y2Z9 468 aa13.71□□□□□ -0.21
NEK3-210ENST00000620675 SPO11Q9Y5K1 396 aa13.71□□□□□ -0.21
NEK3-210ENST00000620675 CABIN1Q9Y6J0 2220 aa13.71□□□□□ -0.22
NEK3-210ENST00000620675 ADAMTS9Q9P2N4 1935 aa13.71□□□□□ -0.22
NEK3-210ENST00000620675 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.7□□□□□ -0.22
NEK3-210ENST00000620675 CCDC163A0A0D9SF12 145 aa13.7□□□□□ -0.22
NEK3-210ENST00000620675 A0A0J9YYE9 177 aa13.7□□□□□ -0.22
NEK3-210ENST00000620675 ANKRD66B4E2M5 251 aa13.7□□□□□ -0.22
NEK3-210ENST00000620675 AURKAO14965 403 aa13.7□□□□□ -0.22
NEK3-210ENST00000620675 ANXA9O76027 345 aa13.7□□□□□ -0.22
NEK3-210ENST00000620675 TMEM63AO94886 807 aa13.7□□□□□ -0.22
NEK3-210ENST00000620675 TRBC1P01850 177 aa13.7□□□□□ -0.22
NEK3-210ENST00000620675 CD6P30203 668 aa13.7□□□□□ -0.22
NEK3-210ENST00000620675 MAT2AP31153 395 aaKnown RBP13.7□□□□□ -0.22
NEK3-210ENST00000620675 ACTN2P35609 894 aa13.7□□□□□ -0.22
NEK3-210ENST00000620675 HNF1BP35680 557 aa13.7□□□□□ -0.22
NEK3-210ENST00000620675 MMP12P39900 470 aa13.7□□□□□ -0.22
NEK3-210ENST00000620675 SLC7A5Q01650 507 aa13.7□□□□□ -0.22
NEK3-210ENST00000620675 LMNB2Q03252 620 aa13.7□□□□□ -0.22
NEK3-210ENST00000620675 RALGDSQ12967 914 aa13.7□□□□□ -0.22
NEK3-210ENST00000620675 SLC1A5Q15758 541 aa13.7□□□□□ -0.22
NEK3-210ENST00000620675 USP39Q53GS9 565 aaKnown RBP13.7□□□□□ -0.22
NEK3-210ENST00000620675 RANBP10Q6VN20 620 aa13.7□□□□□ -0.22
NEK3-210ENST00000620675 RFLNAQ6ZTI6 216 aa13.7□□□□□ -0.22
NEK3-210ENST00000620675 TMEFF1Q8IYR6 380 aa13.7□□□□□ -0.22
NEK3-210ENST00000620675 GRK7Q8WTQ7 553 aa13.7□□□□□ -0.22
NEK3-210ENST00000620675 CPT1BQ92523 772 aa13.7□□□□□ -0.22
NEK3-210ENST00000620675 SPOCK2Q92563 424 aa13.7□□□□□ -0.22
NEK3-210ENST00000620675 EID2BQ96D98 161 aa13.7□□□□□ -0.22
NEK3-210ENST00000620675 RMDN1Q96DB5 314 aa13.7□□□□□ -0.22
NEK3-210ENST00000620675 IFT43Q96FT9 208 aa13.7□□□□□ -0.22
NEK3-210ENST00000620675 FEM1CQ96JP0 617 aa13.7□□□□□ -0.22
NEK3-210ENST00000620675 LRRC1Q9BTT6 524 aa13.7□□□□□ -0.22
NEK3-210ENST00000620675 BTBD1Q9H0C5 482 aa13.7□□□□□ -0.22
NEK3-210ENST00000620675 HAUS2Q9NVX0 235 aa13.7□□□□□ -0.22
NEK3-210ENST00000620675 ZSCAN32Q9NX65 697 aa13.7□□□□□ -0.22
NEK3-210ENST00000620675 ASIC3Q9UHC3 531 aa13.7□□□□□ -0.22
NEK3-210ENST00000620675 FZD4Q9ULV1 537 aa13.7□□□□□ -0.22
NEK3-210ENST00000620675 ZNF292O60281 2723 aa13.7□□□□□ -0.22
NEK3-210ENST00000620675 TP73O15350 636 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms