RNA–Protein interactions for RNA: ENST00000618469.1

BRCA1-228, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-228ENST00000618469 WRAP53Q9BUR4 548 aaKnown RBP16.13■□□□□ 0.17
BRCA1-228ENST00000618469 GOLPH3Q9H4A6 298 aa16.13■□□□□ 0.17
BRCA1-228ENST00000618469 APOBEC2Q9Y235 224 aaKnown RBP16.13■□□□□ 0.17
BRCA1-228ENST00000618469 TTC24A2A3L6 582 aaPredicted RBP16.12■□□□□ 0.17
BRCA1-228ENST00000618469 A6NNZ2 444 aa16.12■□□□□ 0.17
BRCA1-228ENST00000618469 RAD51BO15315 384 aa16.12■□□□□ 0.17
BRCA1-228ENST00000618469 DFNA5O60443 496 aa16.12■□□□□ 0.17
BRCA1-228ENST00000618469 PAK4O96013 591 aaPredicted RBP16.12■□□□□ 0.17
BRCA1-228ENST00000618469 PRKCGP05129 697 aa16.12■□□□□ 0.17
BRCA1-228ENST00000618469 ATXN1LP0C7T5 689 aaKnown RBP16.12■□□□□ 0.17
BRCA1-228ENST00000618469 CDC25BP30305 580 aa16.12■□□□□ 0.17
BRCA1-228ENST00000618469 ARRB1P49407 418 aaPredicted RBP16.12■□□□□ 0.17
BRCA1-228ENST00000618469 HADHBP55084 474 aaKnown RBP16.12■□□□□ 0.17
BRCA1-228ENST00000618469 MAXP61244 160 aa16.12■□□□□ 0.17
BRCA1-228ENST00000618469 NSUN2Q08J23 767 aaKnown RBP eCLIP16.12■□□□□ 0.17
BRCA1-228ENST00000618469 SGCGQ13326 291 aa16.12■□□□□ 0.17
BRCA1-228ENST00000618469 HNRNPDQ14103 355 aaKnown RBP16.12■□□□□ 0.17
BRCA1-228ENST00000618469 UGP2Q16851 508 aa16.12■□□□□ 0.17
BRCA1-228ENST00000618469 MARC1Q5VT66 337 aa16.12■□□□□ 0.17
BRCA1-228ENST00000618469 LRRC38Q5VT99 294 aa16.12■□□□□ 0.17
BRCA1-228ENST00000618469 ERAP2Q6P179 960 aa16.12■□□□□ 0.17
BRCA1-228ENST00000618469 OXR1Q8N573 874 aa16.12■□□□□ 0.17
BRCA1-228ENST00000618469 SPC24Q8NBT2 197 aa16.12■□□□□ 0.17
BRCA1-228ENST00000618469 OR13H1Q8NG92 308 aa16.12■□□□□ 0.17
BRCA1-228ENST00000618469 ZNF830Q96NB3 372 aaPredicted RBP16.12■□□□□ 0.17
BRCA1-228ENST00000618469 DCBLD2Q96PD2 775 aa16.12■□□□□ 0.17
BRCA1-228ENST00000618469 PCDH12Q9NPG4 1184 aa16.12■□□□□ 0.17
BRCA1-228ENST00000618469 SCUBE2Q9NQ36 999 aa16.12■□□□□ 0.17
BRCA1-228ENST00000618469 PCOLCE2Q9UKZ9 415 aa16.12■□□□□ 0.17
BRCA1-228ENST00000618469 BTBD3Q9Y2F9 522 aa16.12■□□□□ 0.17
BRCA1-228ENST00000618469 ATP8A1Q9Y2Q0 1164 aa16.12■□□□□ 0.17
BRCA1-228ENST00000618469 LRRK1Q38SD2 2015 aa16.12■□□□□ 0.17
BRCA1-228ENST00000618469 A0A0A6YYK5 440 aaPredicted RBP16.11■□□□□ 0.17
BRCA1-228ENST00000618469 C3orf70A6NLC5 250 aaPredicted RBP16.11■□□□□ 0.17
BRCA1-228ENST00000618469 YKT6O15498 198 aa16.11■□□□□ 0.17
BRCA1-228ENST00000618469 PCDHGA12O60330 932 aa16.11■□□□□ 0.17
BRCA1-228ENST00000618469 MMP20O60882 483 aa16.11■□□□□ 0.17
BRCA1-228ENST00000618469 CBFA2T3O75081 653 aa16.11■□□□□ 0.17
BRCA1-228ENST00000618469 MX2P20592 715 aa16.11■□□□□ 0.17
BRCA1-228ENST00000618469 EPHA8P29322 1005 aaPredicted RBP16.11■□□□□ 0.17
BRCA1-228ENST00000618469 MMP12P39900 470 aa16.11■□□□□ 0.17
BRCA1-228ENST00000618469 GRK6P43250 576 aa16.11■□□□□ 0.17
BRCA1-228ENST00000618469 SUOXP51687 545 aa16.11■□□□□ 0.17
BRCA1-228ENST00000618469 SEMG2Q02383 582 aa16.11■□□□□ 0.17
BRCA1-228ENST00000618469 SUZ12Q15022 739 aaKnown RBP16.11■□□□□ 0.17
BRCA1-228ENST00000618469 IFI16Q16666 785 aaKnown RBP16.11■□□□□ 0.17
BRCA1-228ENST00000618469 INAVAQ3KP66 663 aa16.11■□□□□ 0.17
BRCA1-228ENST00000618469 TIGD7Q6NT04 549 aaPredicted RBP16.11■□□□□ 0.17
BRCA1-228ENST00000618469 RAD9BQ6WBX8 426 aa16.11■□□□□ 0.17
BRCA1-228ENST00000618469 KYAT3Q6YP21 454 aaKnown RBP16.11■□□□□ 0.17
BRCA1-228ENST00000618469 ABI3BPQ7Z7G0 1075 aa16.11■□□□□ 0.17
BRCA1-228ENST00000618469 GATAD2AQ86YP4 633 aa16.11■□□□□ 0.17
BRCA1-228ENST00000618469 LRRC49Q8IUZ0 686 aa16.11■□□□□ 0.17
BRCA1-228ENST00000618469 PLD5Q8N7P1 536 aa16.11■□□□□ 0.17
BRCA1-228ENST00000618469 ACRBPQ8NEB7 543 aa16.11■□□□□ 0.17
BRCA1-228ENST00000618469 DENND6BQ8NEG7 585 aa16.11■□□□□ 0.17
BRCA1-228ENST00000618469 HCAR2Q8TDS4 363 aa16.11■□□□□ 0.17
BRCA1-228ENST00000618469 LRRN4Q8WUT4 740 aa16.11■□□□□ 0.17
BRCA1-228ENST00000618469 RNF25Q96BH1 459 aaPredicted RBP16.11■□□□□ 0.17
BRCA1-228ENST00000618469 RNF157Q96PX1 679 aa16.11■□□□□ 0.17
BRCA1-228ENST00000618469 NUDCD1Q96RS6 583 aa16.11■□□□□ 0.17
BRCA1-228ENST00000618469 C1QTNF2Q9BXJ5 285 aa16.11■□□□□ 0.17
BRCA1-228ENST00000618469 NT5MQ9NPB1 228 aa16.11■□□□□ 0.17
BRCA1-228ENST00000618469 DDX56Q9NY93 547 aaKnown RBP16.11■□□□□ 0.17
BRCA1-228ENST00000618469 DTLQ9NZJ0 730 aa16.11■□□□□ 0.17
BRCA1-228ENST00000618469 TTLL3Q9Y4R7 772 aa16.11■□□□□ 0.17
BRCA1-228ENST00000618469 EPN1Q9Y6I3 576 aaPredicted RBP16.11■□□□□ 0.17
BRCA1-228ENST00000618469 KNL1Q8NG31 2342 aa16.11■□□□□ 0.17
BRCA1-228ENST00000618469 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.1■□□□□ 0.17
BRCA1-228ENST00000618469 POM121BA6NF01 834 aa16.1■□□□□ 0.17
BRCA1-228ENST00000618469 TRABD2BA6NFA1 517 aa16.1■□□□□ 0.17
BRCA1-228ENST00000618469 ZNF487B1APH4 448 aa16.1■□□□□ 0.17
BRCA1-228ENST00000618469 FPGTO14772 594 aa16.1■□□□□ 0.17
BRCA1-228ENST00000618469 APOL1O14791 398 aa16.1■□□□□ 0.17
BRCA1-228ENST00000618469 PSTPIP1O43586 416 aa16.1■□□□□ 0.17
BRCA1-228ENST00000618469 TM7SF2O76062 418 aa16.1■□□□□ 0.17
BRCA1-228ENST00000618469 CR2P20023 1033 aa16.1■□□□□ 0.17
BRCA1-228ENST00000618469 SHBQ15464 509 aa16.1■□□□□ 0.17
BRCA1-228ENST00000618469 TMEM52BQ4KMG9 183 aa16.1■□□□□ 0.17
BRCA1-228ENST00000618469 C11orf63Q6NUN7 778 aa16.1■□□□□ 0.17
BRCA1-228ENST00000618469 VSIG1Q86XK7 387 aa16.1■□□□□ 0.17
BRCA1-228ENST00000618469 RFX6Q8HWS3 928 aa16.1■□□□□ 0.17
BRCA1-228ENST00000618469 SLC22A18ASQ8N1D0 253 aa16.1■□□□□ 0.17
BRCA1-228ENST00000618469 RHBDD1Q8TEB9 315 aa16.1■□□□□ 0.17
BRCA1-228ENST00000618469 PDCD6IPQ8WUM4 868 aaKnown RBP16.1■□□□□ 0.17
BRCA1-228ENST00000618469 HDAC11Q96DB2 347 aa16.1■□□□□ 0.17
BRCA1-228ENST00000618469 ECHDC3Q96DC8 303 aa16.1■□□□□ 0.17
BRCA1-228ENST00000618469 NSMCE3Q96MG7 304 aa16.1■□□□□ 0.17
BRCA1-228ENST00000618469 KLF6Q99612 283 aaPredicted RBP16.1■□□□□ 0.17
BRCA1-228ENST00000618469 BAG1Q99933 345 aaPredicted RBP16.1■□□□□ 0.17
BRCA1-228ENST00000618469 ERVMER34-1Q9H9K5 563 aa16.1■□□□□ 0.17
BRCA1-228ENST00000618469 NOD2Q9HC29 1040 aa16.1■□□□□ 0.17
BRCA1-228ENST00000618469 COQ6Q9Y2Z9 468 aa16.1■□□□□ 0.17
BRCA1-228ENST00000618469 REXO2Q9Y3B8 237 aaKnown RBP16.1■□□□□ 0.17
BRCA1-228ENST00000618469 HEY1Q9Y5J3 304 aa16.1■□□□□ 0.17
BRCA1-228ENST00000618469 FLNBO75369 2602 aaKnown RBP16.09■□□□□ 0.17
BRCA1-228ENST00000618469 RCCD1A6NED2 376 aa16.09■□□□□ 0.17
BRCA1-228ENST00000618469 TRAFD1O14545 582 aaPredicted RBP16.09■□□□□ 0.17
BRCA1-228ENST00000618469 RIOK3O14730 519 aaKnown RBP16.09■□□□□ 0.17
BRCA1-228ENST00000618469 SDC3O75056 442 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms