RNA–Protein interactions for RNA: ENST00000617904.4

TRAPPC3-210, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-210ENST00000617904 TYRP14679 529 aa16.91■□□□□ 0.3
TRAPPC3-210ENST00000617904 RPL26P61254 145 aaKnown RBP16.91■□□□□ 0.3
TRAPPC3-210ENST00000617904 GNGT1P63211 74 aa16.91■□□□□ 0.3
TRAPPC3-210ENST00000617904 BCL2L1Q07817 233 aa16.91■□□□□ 0.3
TRAPPC3-210ENST00000617904 CYTH1Q15438 398 aa16.91■□□□□ 0.3
TRAPPC3-210ENST00000617904 FSCBQ5H9T9 825 aa16.91■□□□□ 0.3
TRAPPC3-210ENST00000617904 PITRM1Q5JRX3 1037 aa16.91■□□□□ 0.3
TRAPPC3-210ENST00000617904 UBAP2Q5T6F2 1119 aaKnown RBP16.91■□□□□ 0.3
TRAPPC3-210ENST00000617904 NUDT18Q6ZVK8 323 aa16.91■□□□□ 0.3
TRAPPC3-210ENST00000617904 KDELC2Q7Z4H8 507 aa16.91■□□□□ 0.3
TRAPPC3-210ENST00000617904 SRLQ86TD4 932 aa16.91■□□□□ 0.3
TRAPPC3-210ENST00000617904 KCNMB4Q86W47 210 aa16.91■□□□□ 0.3
TRAPPC3-210ENST00000617904 PGBD5Q8N414 524 aa16.91■□□□□ 0.3
TRAPPC3-210ENST00000617904 OR52K2Q8NGK3 314 aa16.91■□□□□ 0.3
TRAPPC3-210ENST00000617904 ITFG1Q8TB96 612 aa16.91■□□□□ 0.3
TRAPPC3-210ENST00000617904 ISG20Q96AZ6 181 aaKnown RBP16.91■□□□□ 0.3
TRAPPC3-210ENST00000617904 RPP25Q9BUL9 199 aaKnown RBP16.91■□□□□ 0.3
TRAPPC3-210ENST00000617904 TBC1D17Q9HA65 648 aa16.91■□□□□ 0.3
TRAPPC3-210ENST00000617904 SLC2A4RGQ9NR83 387 aa16.91■□□□□ 0.3
TRAPPC3-210ENST00000617904 PLK2Q9NYY3 685 aa16.91■□□□□ 0.3
TRAPPC3-210ENST00000617904 GGA2Q9UJY4 613 aa16.91■□□□□ 0.3
TRAPPC3-210ENST00000617904 RPL26L1Q9UNX3 145 aaKnown RBP16.91■□□□□ 0.3
TRAPPC3-210ENST00000617904 FAM47DPA6NHR8 397 aa16.9■□□□□ 0.3
TRAPPC3-210ENST00000617904 STK25O00506 426 aa16.9■□□□□ 0.3
TRAPPC3-210ENST00000617904 ZWINTO95229 277 aa16.9■□□□□ 0.3
TRAPPC3-210ENST00000617904 PRAMEF12O95522 483 aa16.9■□□□□ 0.3
TRAPPC3-210ENST00000617904 ATP5BP06576 529 aaKnown RBP16.9■□□□□ 0.3
TRAPPC3-210ENST00000617904 ADH5P11766 374 aa16.9■□□□□ 0.3
TRAPPC3-210ENST00000617904 CSE1LP55060 971 aaKnown RBP16.9■□□□□ 0.3
TRAPPC3-210ENST00000617904 ST8SIA6P61647 398 aa16.9■□□□□ 0.3
TRAPPC3-210ENST00000617904 PRAMEP78395 509 aa16.9■□□□□ 0.3
TRAPPC3-210ENST00000617904 SIRPB2Q5JXA9 342 aa16.9■□□□□ 0.3
TRAPPC3-210ENST00000617904 KIAA0930Q6ICG6 404 aaPredicted RBP16.9■□□□□ 0.3
TRAPPC3-210ENST00000617904 TMEM25Q86YD3 366 aa16.9■□□□□ 0.3
TRAPPC3-210ENST00000617904 NPAS3Q8IXF0 933 aa16.9■□□□□ 0.3
TRAPPC3-210ENST00000617904 ADGRG2Q8IZP9 1017 aa16.9■□□□□ 0.3
TRAPPC3-210ENST00000617904 AGGF1Q8N302 714 aaeCLIP16.9■□□□□ 0.3
TRAPPC3-210ENST00000617904 BRSK1Q8TDC3 778 aa16.9■□□□□ 0.3
TRAPPC3-210ENST00000617904 CABS1Q96KC9 395 aa16.9■□□□□ 0.3
TRAPPC3-210ENST00000617904 ATP13A3Q9H7F0 1226 aa16.9■□□□□ 0.3
TRAPPC3-210ENST00000617904 TRPV4Q9HBA0 871 aa16.9■□□□□ 0.3
TRAPPC3-210ENST00000617904 ZFP14Q9HCL3 533 aa16.9■□□□□ 0.3
TRAPPC3-210ENST00000617904 CHRAC1Q9NRG0 131 aa16.9■□□□□ 0.3
TRAPPC3-210ENST00000617904 EURLQ9NYK6 297 aa16.9■□□□□ 0.3
TRAPPC3-210ENST00000617904 CTNNAL1Q9UBT7 734 aa16.9■□□□□ 0.3
TRAPPC3-210ENST00000617904 CDH7Q9ULB5 785 aa16.9■□□□□ 0.3
TRAPPC3-210ENST00000617904 RIMKLBQ9ULI2 386 aa16.9■□□□□ 0.3
TRAPPC3-210ENST00000617904 DMDP11532 3685 aa16.9■□□□□ 0.3
TRAPPC3-210ENST00000617904 RIF1Q5UIP0 2472 aaKnown RBP16.89■□□□□ 0.29
TRAPPC3-210ENST00000617904 TM9SF1O15321 606 aa16.89■□□□□ 0.29
TRAPPC3-210ENST00000617904 PRPF4O43172 522 aaKnown RBP eCLIP16.89■□□□□ 0.291e-9■■■■■ 35.4
TRAPPC3-210ENST00000617904 SNAP91O60641 907 aa16.89■□□□□ 0.29
TRAPPC3-210ENST00000617904 SOCS5O75159 536 aa16.89■□□□□ 0.29
TRAPPC3-210ENST00000617904 MMP2P08253 660 aa16.89■□□□□ 0.29
TRAPPC3-210ENST00000617904 GLDCP23378 1020 aa16.89■□□□□ 0.29
TRAPPC3-210ENST00000617904 SERPINA4P29622 427 aa16.89■□□□□ 0.29
TRAPPC3-210ENST00000617904 POLD2P49005 469 aa16.89■□□□□ 0.29
TRAPPC3-210ENST00000617904 GYS2P54840 703 aa16.89■□□□□ 0.29
TRAPPC3-210ENST00000617904 IL9RQ01113 521 aa16.89■□□□□ 0.29
TRAPPC3-210ENST00000617904 TERF2Q15554 542 aa16.89■□□□□ 0.29
TRAPPC3-210ENST00000617904 LY6G5CQ5SRR4 150 aa16.89■□□□□ 0.29
TRAPPC3-210ENST00000617904 TSTD2Q5T7W7 516 aa16.89■□□□□ 0.29
TRAPPC3-210ENST00000617904 ARMC12Q5T9G4 340 aa16.89■□□□□ 0.29
TRAPPC3-210ENST00000617904 DENND5AQ6IQ26 1287 aa16.89■□□□□ 0.29
TRAPPC3-210ENST00000617904 PARM1Q6UWI2 310 aa16.89■□□□□ 0.29
TRAPPC3-210ENST00000617904 KIAA0408Q6ZU52 694 aa16.89■□□□□ 0.29
TRAPPC3-210ENST00000617904 TAX1BP1Q86VP1 789 aa16.89■□□□□ 0.29
TRAPPC3-210ENST00000617904 RYBPQ8N488 228 aaPredicted RBP16.89■□□□□ 0.29
TRAPPC3-210ENST00000617904 CPA6Q8N4T0 437 aa16.89■□□□□ 0.29
TRAPPC3-210ENST00000617904 PCDH20Q8N6Y1 951 aaKnown RBP16.89■□□□□ 0.29
TRAPPC3-210ENST00000617904 ACMSDQ8TDX5 336 aa16.89■□□□□ 0.29
TRAPPC3-210ENST00000617904 FGF13Q92913 245 aa16.89■□□□□ 0.29
TRAPPC3-210ENST00000617904 FGF14Q92915 247 aa16.89■□□□□ 0.29
TRAPPC3-210ENST00000617904 ALG14Q96F25 216 aa16.89■□□□□ 0.29
TRAPPC3-210ENST00000617904 TSNARE1Q96NA8 513 aa16.89■□□□□ 0.29
TRAPPC3-210ENST00000617904 ASB16Q96NS5 453 aa16.89■□□□□ 0.29
TRAPPC3-210ENST00000617904 TUBGCP5Q96RT8 1024 aa16.89■□□□□ 0.29
TRAPPC3-210ENST00000617904 NOD2Q9HC29 1040 aa16.89■□□□□ 0.29
TRAPPC3-210ENST00000617904 ARHGEF3Q9NR81 526 aa16.89■□□□□ 0.29
TRAPPC3-210ENST00000617904 DLGAP2Q9P1A6 1054 aa16.89■□□□□ 0.29
TRAPPC3-210ENST00000617904 RAI2Q9Y5P3 530 aa16.89■□□□□ 0.29
TRAPPC3-210ENST00000617904 WNT6Q9Y6F9 365 aa16.89■□□□□ 0.29
TRAPPC3-210ENST00000617904 FAM186AA6NE01 2351 aa16.89■□□□□ 0.29
TRAPPC3-210ENST00000617904 CFAP54Q96N23 3096 aa16.88■□□□□ 0.29
TRAPPC3-210ENST00000617904 NOTCH4Q99466 2003 aa16.88■□□□□ 0.29
TRAPPC3-210ENST00000617904 TMEM120BA0PK00 339 aa16.88■□□□□ 0.29
TRAPPC3-210ENST00000617904 TRIM49D1C9J1S8 452 aa16.88■□□□□ 0.29
TRAPPC3-210ENST00000617904 HOXC11O43248 304 aaPredicted RBP16.88■□□□□ 0.29
TRAPPC3-210ENST00000617904 GSRP00390 522 aa16.88■□□□□ 0.29
TRAPPC3-210ENST00000617904 CR2P20023 1033 aa16.88■□□□□ 0.29
TRAPPC3-210ENST00000617904 GCAP28676 217 aa16.88■□□□□ 0.29
TRAPPC3-210ENST00000617904 CD70P32970 193 aa16.88■□□□□ 0.29
TRAPPC3-210ENST00000617904 CCT5P48643 541 aa16.88■□□□□ 0.29
TRAPPC3-210ENST00000617904 ECT2LQ008S8 904 aa16.88■□□□□ 0.29
TRAPPC3-210ENST00000617904 EFTUD2Q15029 972 aaKnown RBP eCLIP16.88■□□□□ 0.299e-8■■■■■ 28.3
TRAPPC3-210ENST00000617904 DHCR24Q15392 516 aa16.88■□□□□ 0.29
TRAPPC3-210ENST00000617904 ACCSLQ4AC99 568 aa16.88■□□□□ 0.29
TRAPPC3-210ENST00000617904 FAM182AQ5T1J6 154 aa16.88■□□□□ 0.29
TRAPPC3-210ENST00000617904 TRMT10BQ6PF06 316 aaKnown RBP16.88■□□□□ 0.29
TRAPPC3-210ENST00000617904 NCEH1Q6PIU2 408 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms