RNA–Protein interactions for RNA: ENST00000617647.4

PDE6A-205, Transcript of phosphodiesterase 6A, humanhuman

TSL 1 (best) BASIC

Gene PDE6A, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-205ENST00000617647 YTHDF1Q9BYJ9 559 aaKnown RBP7.43□□□□□ -1.22
PDE6A-205ENST00000617647 SLC6A15Q9H2J7 730 aa7.43□□□□□ -1.22
PDE6A-205ENST00000617647 LRRC40Q9H9A6 602 aa7.43□□□□□ -1.22
PDE6A-205ENST00000617647 CYP26B1Q9NR63 512 aa7.43□□□□□ -1.22
PDE6A-205ENST00000617647 NUFIP1Q9UHK0 495 aaKnown RBP7.43□□□□□ -1.22
PDE6A-205ENST00000617647 ABCG2Q9UNQ0 655 aa7.43□□□□□ -1.22
PDE6A-205ENST00000617647 GAKO14976 1311 aa7.43□□□□□ -1.22
PDE6A-205ENST00000617647 EFCAB9A8MZ26 197 aa7.43□□□□□ -1.22
PDE6A-205ENST00000617647 ERVV-2B6SEH9 535 aa7.43□□□□□ -1.22
PDE6A-205ENST00000617647 ZBTB7AO95365 584 aa7.43□□□□□ -1.22
PDE6A-205ENST00000617647 MPSTP25325 297 aa7.43□□□□□ -1.22
PDE6A-205ENST00000617647 RFC4P35249 363 aa7.43□□□□□ -1.22
PDE6A-205ENST00000617647 ATN1P54259 1190 aaPredicted RBP7.43□□□□□ -1.22
PDE6A-205ENST00000617647 MLLT6P55198 1093 aaPredicted RBP7.43□□□□□ -1.22
PDE6A-205ENST00000617647 PDIA6Q15084 440 aa7.43□□□□□ -1.22
PDE6A-205ENST00000617647 UGP2Q16851 508 aa7.43□□□□□ -1.22
PDE6A-205ENST00000617647 TRIM71Q2Q1W2 868 aaKnown RBP7.43□□□□□ -1.22
PDE6A-205ENST00000617647 IL31Q6EBC2 164 aa7.43□□□□□ -1.22
PDE6A-205ENST00000617647 TMEM270Q6UE05 265 aa7.43□□□□□ -1.22
PDE6A-205ENST00000617647 PLET1Q6UQ28 207 aa7.43□□□□□ -1.22
PDE6A-205ENST00000617647 MROH5Q6ZUA9 1318 aa7.43□□□□□ -1.22
PDE6A-205ENST00000617647 ZDHHC13Q8IUH4 622 aa7.43□□□□□ -1.22
PDE6A-205ENST00000617647 DNAAF3Q8N9W5 541 aa7.43□□□□□ -1.22
PDE6A-205ENST00000617647 C19orf18Q8NEA5 215 aa7.43□□□□□ -1.22
PDE6A-205ENST00000617647 NDNFQ8TB73 568 aa7.43□□□□□ -1.22
PDE6A-205ENST00000617647 CPT1BQ92523 772 aa7.43□□□□□ -1.22
PDE6A-205ENST00000617647 TMCO6Q96DC7 493 aa7.43□□□□□ -1.22
PDE6A-205ENST00000617647 NARS2Q96I59 477 aaKnown RBP7.43□□□□□ -1.22
PDE6A-205ENST00000617647 GON7Q9BXV9 100 aa7.43□□□□□ -1.22
PDE6A-205ENST00000617647 DCSTAMPQ9H295 470 aa7.43□□□□□ -1.22
PDE6A-205ENST00000617647 KIF17Q9P2E2 1029 aa7.43□□□□□ -1.22
PDE6A-205ENST00000617647 ING4Q9UNL4 249 aa7.43□□□□□ -1.22
PDE6A-205ENST00000617647 NFAT5O94916 1531 aa7.43□□□□□ -1.22
PDE6A-205ENST00000617647 SH3D21A4FU49 640 aa7.43□□□□□ -1.22
PDE6A-205ENST00000617647 EFCAB10A6NFE3 127 aa7.43□□□□□ -1.22
PDE6A-205ENST00000617647 G3V3G9 751 aa7.43□□□□□ -1.22
PDE6A-205ENST00000617647 SCO2O43819 266 aa7.43□□□□□ -1.22
PDE6A-205ENST00000617647 RECQL5O94762 991 aaPredicted RBP7.43□□□□□ -1.22
PDE6A-205ENST00000617647 OR5F1O95221 314 aa7.43□□□□□ -1.22
PDE6A-205ENST00000617647 USP17L8P0C7I0 530 aa7.43□□□□□ -1.22
PDE6A-205ENST00000617647 TGM1P22735 817 aa7.43□□□□□ -1.22
PDE6A-205ENST00000617647 GYG1P46976 350 aa7.43□□□□□ -1.22
PDE6A-205ENST00000617647 RAP1GAPP47736 663 aa7.43□□□□□ -1.22
PDE6A-205ENST00000617647 HADHBP55084 474 aaKnown RBP7.43□□□□□ -1.22
PDE6A-205ENST00000617647 CHRNB3Q05901 458 aa7.43□□□□□ -1.22
PDE6A-205ENST00000617647 ENPEPQ07075 957 aa7.43□□□□□ -1.22
PDE6A-205ENST00000617647 DMC1Q14565 340 aa7.43□□□□□ -1.22
PDE6A-205ENST00000617647 GPR68Q15743 365 aa7.43□□□□□ -1.22
PDE6A-205ENST00000617647 ZNF404Q494X3 552 aa7.43□□□□□ -1.22
PDE6A-205ENST00000617647 MSS51Q4VC12 460 aa7.43□□□□□ -1.22
PDE6A-205ENST00000617647 KATNAL2Q8IYT4 538 aa7.43□□□□□ -1.22
PDE6A-205ENST00000617647 PACRGLQ8N7B6 248 aa7.43□□□□□ -1.22
PDE6A-205ENST00000617647 FEZF2Q8TBJ5 459 aa7.43□□□□□ -1.22
PDE6A-205ENST00000617647 MUS81Q96NY9 551 aa7.43□□□□□ -1.22
PDE6A-205ENST00000617647 TMEM245Q9H330 911 aa7.43□□□□□ -1.22
PDE6A-205ENST00000617647 KAT8Q9H7Z6 458 aaKnown RBP7.43□□□□□ -1.22
PDE6A-205ENST00000617647 PCDHB16Q9NRJ7 776 aa7.43□□□□□ -1.22
PDE6A-205ENST00000617647 SIRPGQ9P1W8 387 aa7.43□□□□□ -1.22
PDE6A-205ENST00000617647 ZNF222Q9UK12 451 aa7.43□□□□□ -1.22
PDE6A-205ENST00000617647 COMMD10Q9Y6G5 202 aa7.43□□□□□ -1.22
PDE6A-205ENST00000617647 DDX60Q8IY21 1712 aaKnown RBP7.43□□□□□ -1.22
PDE6A-205ENST00000617647 PRSS51A0A1B0GVH4 220 aa7.43□□□□□ -1.22
PDE6A-205ENST00000617647 PRSS44E7EML9 344 aa7.43□□□□□ -1.22
PDE6A-205ENST00000617647 F5H6K3 240 aa7.43□□□□□ -1.22
PDE6A-205ENST00000617647 GCP02774 474 aa7.43□□□□□ -1.22
PDE6A-205ENST00000617647 CYP3A5P20815 502 aa7.43□□□□□ -1.22
PDE6A-205ENST00000617647 RPS3P23396 243 aaKnown RBP eCLIP7.43□□□□□ -1.22
PDE6A-205ENST00000617647 KLRC2P26717 231 aa7.43□□□□□ -1.22
PDE6A-205ENST00000617647 SNAP25P60880 206 aa7.43□□□□□ -1.22
PDE6A-205ENST00000617647 TRIP4Q15650 581 aaPredicted RBP7.43□□□□□ -1.22
PDE6A-205ENST00000617647 TOR2AQ5JU69 321 aa7.43□□□□□ -1.22
PDE6A-205ENST00000617647 COMMD7Q86VX2 200 aa7.43□□□□□ -1.22
PDE6A-205ENST00000617647 MCOLN2Q8IZK6 566 aa7.43□□□□□ -1.22
PDE6A-205ENST00000617647 CLYBLQ8N0X4 340 aa7.43□□□□□ -1.22
PDE6A-205ENST00000617647 LSMEM2Q8N112 164 aa7.43□□□□□ -1.22
PDE6A-205ENST00000617647 MPP5Q8N3R9 675 aa7.43□□□□□ -1.22
PDE6A-205ENST00000617647 DAGLBQ8NCG7 672 aa7.43□□□□□ -1.22
PDE6A-205ENST00000617647 ZNF540Q8NDQ6 660 aa7.43□□□□□ -1.22
PDE6A-205ENST00000617647 HDAC10Q969S8 669 aa7.43□□□□□ -1.22
PDE6A-205ENST00000617647 ZNF641Q96N77 438 aaPredicted RBP7.43□□□□□ -1.22
PDE6A-205ENST00000617647 EYA3Q99504 573 aa7.43□□□□□ -1.22
PDE6A-205ENST00000617647 LPIN3Q9BQK8 851 aa7.43□□□□□ -1.22
PDE6A-205ENST00000617647 TINF2Q9BSI4 451 aa7.43□□□□□ -1.22
PDE6A-205ENST00000617647 FEM1AQ9BSK4 669 aa7.43□□□□□ -1.22
PDE6A-205ENST00000617647 UNC93B1Q9H1C4 597 aa7.43□□□□□ -1.22
PDE6A-205ENST00000617647 PPA2Q9H2U2 334 aa7.43□□□□□ -1.22
PDE6A-205ENST00000617647 GMEB2Q9UKD1 530 aa7.43□□□□□ -1.22
PDE6A-205ENST00000617647 ATP8B3O60423 1300 aa7.42□□□□□ -1.22
PDE6A-205ENST00000617647 SPATA31A3Q5VYP0 1347 aa7.42□□□□□ -1.22
PDE6A-205ENST00000617647 CYP3A7-CYP3A51PA0A087WV96 503 aa7.42□□□□□ -1.22
PDE6A-205ENST00000617647 ATP6AP2A0A1C7CYW4 349 aa7.42□□□□□ -1.22
PDE6A-205ENST00000617647 CCDC154A6NI56 674 aa7.42□□□□□ -1.22
PDE6A-205ENST00000617647 ZBTB14O43829 449 aa7.42□□□□□ -1.22
PDE6A-205ENST00000617647 AIREO43918 545 aa7.42□□□□□ -1.22
PDE6A-205ENST00000617647 SOAT2O75908 522 aa7.42□□□□□ -1.22
PDE6A-205ENST00000617647 NR3C2P08235 984 aa7.42□□□□□ -1.22
PDE6A-205ENST00000617647 IMPDH1P20839 514 aa7.42□□□□□ -1.22
PDE6A-205ENST00000617647 CYP3A7P24462 503 aa7.42□□□□□ -1.22
PDE6A-205ENST00000617647 ERP29P30040 261 aaKnown RBP7.42□□□□□ -1.22
PDE6A-205ENST00000617647 AP2S1P53680 142 aaPredicted RBP7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms