RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 CCL16O15467 120 aa17.44■□□□□ 0.38
PCDHGC3-205ENST00000617641 MYL4P12829 197 aa17.44■□□□□ 0.38
PCDHGC3-205ENST00000617641 GRK2P25098 689 aa17.44■□□□□ 0.38
PCDHGC3-205ENST00000617641 CSKP41240 450 aa17.44■□□□□ 0.38
PCDHGC3-205ENST00000617641 LEPRP48357 1165 aaKnown RBP17.44■□□□□ 0.38
PCDHGC3-205ENST00000617641 KCNJ2P63252 427 aa17.44■□□□□ 0.38
PCDHGC3-205ENST00000617641 ZBTB16Q05516 673 aa17.44■□□□□ 0.38
PCDHGC3-205ENST00000617641 FPGSQ05932 587 aa17.44■□□□□ 0.38
PCDHGC3-205ENST00000617641 SLC14A2Q15849 920 aa17.44■□□□□ 0.38
PCDHGC3-205ENST00000617641 ZNF783Q6ZMS7 281 aa17.44■□□□□ 0.38
PCDHGC3-205ENST00000617641 PACS2Q86VP3 889 aa17.44■□□□□ 0.38
PCDHGC3-205ENST00000617641 KLHL29Q96CT2 875 aa17.44■□□□□ 0.38
PCDHGC3-205ENST00000617641 SCYL1Q96KG9 808 aa17.44■□□□□ 0.38
PCDHGC3-205ENST00000617641 SMIM14Q96QK8 99 aa17.44■□□□□ 0.38
PCDHGC3-205ENST00000617641 OMDQ99983 421 aa17.44■□□□□ 0.38
PCDHGC3-205ENST00000617641 CORO1BQ9BR76 489 aa17.44■□□□□ 0.38
PCDHGC3-205ENST00000617641 UNKQ9C0B0 810 aaKnown RBP17.44■□□□□ 0.38
PCDHGC3-205ENST00000617641 TXLNGQ9NUQ3 528 aa17.44■□□□□ 0.38
PCDHGC3-205ENST00000617641 LSM7Q9UK45 103 aaKnown RBP17.44■□□□□ 0.38
PCDHGC3-205ENST00000617641 PCDHGC4Q9Y5F7 938 aa17.44■□□□□ 0.38
PCDHGC3-205ENST00000617641 SPO11Q9Y5K1 396 aa17.44■□□□□ 0.38
PCDHGC3-205ENST00000617641 HIDE1A8MVS5 230 aa17.43■□□□□ 0.38
PCDHGC3-205ENST00000617641 CBX6O95503 412 aa17.43■□□□□ 0.38
PCDHGC3-205ENST00000617641 PRLP01236 227 aa17.43■□□□□ 0.38
PCDHGC3-205ENST00000617641 PDHA1P08559 390 aa17.43■□□□□ 0.38
PCDHGC3-205ENST00000617641 T-ENOLP0DO92 83 aa17.43■□□□□ 0.38
PCDHGC3-205ENST00000617641 AQP5P55064 265 aa17.43■□□□□ 0.38
PCDHGC3-205ENST00000617641 ACVR1Q04771 509 aa17.43■□□□□ 0.38
PCDHGC3-205ENST00000617641 DLG1Q12959 904 aa17.43■□□□□ 0.38
PCDHGC3-205ENST00000617641 CDH18Q13634 790 aa17.43■□□□□ 0.38
PCDHGC3-205ENST00000617641 PLPP4Q5VZY2 271 aa17.43■□□□□ 0.38
PCDHGC3-205ENST00000617641 ALYREFQ86V81 257 aaKnown RBP17.43■□□□□ 0.38
PCDHGC3-205ENST00000617641 FAM217AQ8IXS0 508 aa17.43■□□□□ 0.38
PCDHGC3-205ENST00000617641 TMEM151AQ8N4L1 468 aa17.43■□□□□ 0.38
PCDHGC3-205ENST00000617641 OR6Y1Q8NGX8 325 aa17.43■□□□□ 0.38
PCDHGC3-205ENST00000617641 GABPB2Q8TAK5 448 aaPredicted RBP17.43■□□□□ 0.38
PCDHGC3-205ENST00000617641 NXNL1Q96CM4 212 aa17.43■□□□□ 0.38
PCDHGC3-205ENST00000617641 RMDN1Q96DB5 314 aa17.43■□□□□ 0.38
PCDHGC3-205ENST00000617641 NUDCD1Q96RS6 583 aa17.43■□□□□ 0.38
PCDHGC3-205ENST00000617641 SORT1Q99523 831 aa17.43■□□□□ 0.38
PCDHGC3-205ENST00000617641 OLFM1Q99784 485 aa17.43■□□□□ 0.38
PCDHGC3-205ENST00000617641 TDRD1Q9BXT4 1180 aaKnown RBP17.43■□□□□ 0.38
PCDHGC3-205ENST00000617641 HAO1Q9UJM8 370 aa17.43■□□□□ 0.38
PCDHGC3-205ENST00000617641 OR51B4Q9Y5P0 310 aa17.43■□□□□ 0.38
PCDHGC3-205ENST00000617641 RASSF9O75901 435 aa17.43■□□□□ 0.38
PCDHGC3-205ENST00000617641 SBK3P0C264 359 aa17.43■□□□□ 0.38
PCDHGC3-205ENST00000617641 CRABP2P29373 138 aa17.43■□□□□ 0.38
PCDHGC3-205ENST00000617641 SKIV2L2P42285 1042 aaKnown RBP17.43■□□□□ 0.38
PCDHGC3-205ENST00000617641 SLC12A2P55011 1212 aa17.43■□□□□ 0.38
PCDHGC3-205ENST00000617641 ABCE1P61221 599 aaKnown RBP17.43■□□□□ 0.38
PCDHGC3-205ENST00000617641 SLC7A9P82251 487 aa17.43■□□□□ 0.38
PCDHGC3-205ENST00000617641 POU4F1Q01851 419 aa17.43■□□□□ 0.38
PCDHGC3-205ENST00000617641 TMEM240Q5SV17 173 aa17.43■□□□□ 0.38
PCDHGC3-205ENST00000617641 NAPRTQ6XQN6 538 aa17.43■□□□□ 0.38
PCDHGC3-205ENST00000617641 ASRGL1Q7L266 308 aa17.43■□□□□ 0.38
PCDHGC3-205ENST00000617641 BBS7Q8IWZ6 715 aa17.43■□□□□ 0.38
PCDHGC3-205ENST00000617641 ELMOD1Q8N336 334 aa17.43■□□□□ 0.38
PCDHGC3-205ENST00000617641 SMG9Q9H0W8 520 aaKnown RBP17.43■□□□□ 0.38
PCDHGC3-205ENST00000617641 VPS51Q9UID3 782 aa17.43■□□□□ 0.38
PCDHGC3-205ENST00000617641 SH3BP1Q9Y3L3 701 aa17.43■□□□□ 0.38
PCDHGC3-205ENST00000617641 CCDC162PA2VCL2 907 aa17.42■□□□□ 0.38
PCDHGC3-205ENST00000617641 CFAP73A6NFT4 308 aa17.42■□□□□ 0.38
PCDHGC3-205ENST00000617641 S1PR4O95977 384 aa17.42■□□□□ 0.38
PCDHGC3-205ENST00000617641 GOT2P00505 430 aaKnown RBP17.42■□□□□ 0.38
PCDHGC3-205ENST00000617641 CTNNB1P35222 781 aa17.42■□□□□ 0.38
PCDHGC3-205ENST00000617641 CLCN5P51795 746 aa17.42■□□□□ 0.38
PCDHGC3-205ENST00000617641 CTC1Q2NKJ3 1217 aa17.42■□□□□ 0.38
PCDHGC3-205ENST00000617641 LRRC8EQ6NSJ5 796 aa17.42■□□□□ 0.38
PCDHGC3-205ENST00000617641 TTC7BQ86TV6 843 aa17.42■□□□□ 0.38
PCDHGC3-205ENST00000617641 FSTL5Q8N475 847 aaPredicted RBP17.42■□□□□ 0.38
PCDHGC3-205ENST00000617641 DNAJC5GQ8N7S2 189 aa17.42■□□□□ 0.38
PCDHGC3-205ENST00000617641 TDRD5Q8NAT2 981 aaKnown RBP17.42■□□□□ 0.38
PCDHGC3-205ENST00000617641 LPCAT1Q8NF37 534 aa17.42■□□□□ 0.38
PCDHGC3-205ENST00000617641 DDI1Q8WTU0 396 aa17.42■□□□□ 0.38
PCDHGC3-205ENST00000617641 ALG14Q96F25 216 aa17.42■□□□□ 0.38
PCDHGC3-205ENST00000617641 GPR78Q96P69 363 aa17.42■□□□□ 0.38
PCDHGC3-205ENST00000617641 TMEM237Q96Q45 408 aa17.42■□□□□ 0.38
PCDHGC3-205ENST00000617641 HCFC1R1Q9NWW0 138 aa17.42■□□□□ 0.38
PCDHGC3-205ENST00000617641 PLK2Q9NYY3 685 aa17.42■□□□□ 0.38
PCDHGC3-205ENST00000617641 LHX3Q9UBR4 397 aa17.42■□□□□ 0.38
PCDHGC3-205ENST00000617641 PRKAG2Q9UGJ0 569 aa17.42■□□□□ 0.38
PCDHGC3-205ENST00000617641 RAI2Q9Y5P3 530 aa17.42■□□□□ 0.38
PCDHGC3-205ENST00000617641 TRAV19A0A0A6YYK7 116 aa17.42■□□□□ 0.38
PCDHGC3-205ENST00000617641 RPP40O75818 363 aaKnown RBP17.42■□□□□ 0.38
PCDHGC3-205ENST00000617641 GLUD1P00367 558 aa17.42■□□□□ 0.38
PCDHGC3-205ENST00000617641 APOA4P06727 396 aa17.42■□□□□ 0.38
PCDHGC3-205ENST00000617641 COL6A2P12110 1019 aa17.42■□□□□ 0.38
PCDHGC3-205ENST00000617641 NQO1P15559 274 aaKnown RBP17.42■□□□□ 0.38
PCDHGC3-205ENST00000617641 LAMB3Q13751 1172 aa17.42■□□□□ 0.38
PCDHGC3-205ENST00000617641 TTC31Q49AM3 519 aaPredicted RBP17.42■□□□□ 0.38
PCDHGC3-205ENST00000617641 MFN1Q8IWA4 741 aa17.42■□□□□ 0.38
PCDHGC3-205ENST00000617641 PIWIL2Q8TC59 973 aaKnown RBP17.42■□□□□ 0.38
PCDHGC3-205ENST00000617641 PNPOQ9NVS9 261 aa17.42■□□□□ 0.38
PCDHGC3-205ENST00000617641 FCF1Q9Y324 198 aaKnown RBP17.42■□□□□ 0.38
PCDHGC3-205ENST00000617641 ANKRD36A6QL64 1941 aa17.41■□□□□ 0.38
PCDHGC3-205ENST00000617641 DOCK6Q96HP0 2047 aa17.41■□□□□ 0.38
PCDHGC3-205ENST00000617641 TRIM13O60858 407 aa17.41■□□□□ 0.38
PCDHGC3-205ENST00000617641 SLC4A1P02730 911 aa17.41■□□□□ 0.38
PCDHGC3-205ENST00000617641 DNAJB1P25685 340 aa17.41■□□□□ 0.38
PCDHGC3-205ENST00000617641 CDC25CP30307 473 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms