RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 LRCH1Q9Y2L9 728 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 HLA-DPA1P20036 260 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 PMS2P54278 862 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 PIGHQ14442 188 aaPredicted RBP3.37□□□□□ -1.87
LPP-220ENST00000617246 ADHFE1Q8IWW8 467 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 MS4A14Q96JA4 679 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 ZNF514Q96K75 400 aaPredicted RBP3.37□□□□□ -1.87
LPP-220ENST00000617246 A1CFQ9NQ94 594 aaKnown RBP3.37□□□□□ -1.87
LPP-220ENST00000617246 IFNKQ9P0W0 207 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 RBM7Q9Y580 266 aaKnown RBP3.37□□□□□ -1.87
LPP-220ENST00000617246 CCDC187A0A096LP49 1063 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 PDHBP11177 359 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 BMPR1AP36894 532 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 CDH6P55285 790 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 SNAP25P60880 206 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 LAMTOR4Q0VGL1 99 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 PPM1JQ5JR12 505 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 TREML2Q5T2D2 321 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 RPTNQ6XPR3 784 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 KIF18BQ86Y91 864 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 PTPRN2Q92932 1015 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 TMEM209Q96SK2 561 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 WDR26Q9H7D7 661 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 REXO2Q9Y3B8 237 aaKnown RBP3.37□□□□□ -1.87
LPP-220ENST00000617246 FIS1Q9Y3D6 152 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 FAM32AQ9Y421 112 aaKnown RBP3.37□□□□□ -1.87
LPP-220ENST00000617246 UBFD1O14562 309 aaKnown RBP3.37□□□□□ -1.87
LPP-220ENST00000617246 STAU1O95793 577 aaKnown RBP3.37□□□□□ -1.87
LPP-220ENST00000617246 DNASE1P24855 282 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 MAGEA6P43360 314 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 PDIK1LQ8N165 341 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 NARS2Q96I59 477 aaKnown RBP3.37□□□□□ -1.87
LPP-220ENST00000617246 NANOGQ9H9S0 305 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 CPSF2Q9P2I0 782 aaKnown RBP3.37□□□□□ -1.87
LPP-220ENST00000617246 PMF1-BGLAPU3KQ54 211 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 FGGP02679 453 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 TUBBP07437 444 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 PON2Q15165 354 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 CELF3Q5SZQ8 465 aaKnown RBP3.37□□□□□ -1.87
LPP-220ENST00000617246 HECTD2Q5U5R9 776 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 DCLK2Q8N568 766 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 ASB5Q8WWX0 329 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 G3V2T6 193 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 B4GALT4O60513 344 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 DNAJA2O60884 412 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 ENDOUP21128 410 aaKnown RBP3.37□□□□□ -1.87
LPP-220ENST00000617246 CLCN1P35523 988 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 SREBF1P36956 1147 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 ETF1P62495 437 aaKnown RBP3.37□□□□□ -1.87
LPP-220ENST00000617246 PDK1Q15118 436 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 FBXO39Q8N4B4 442 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 HERPUD2Q9BSE4 406 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 NUDT9Q9BW91 350 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 IFT80Q9P2H3 777 aaPredicted RBP3.37□□□□□ -1.87
LPP-220ENST00000617246 FBXW2Q9UKT8 454 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 SLC5A6Q9Y289 635 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 PCDHGA8Q9Y5G5 932 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 SOWAHBA6NEL2 793 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 H3BQ06 376 aaPredicted RBP3.37□□□□□ -1.87
LPP-220ENST00000617246 TRIM38O00635 465 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 TERTO14746 1132 aaKnown RBP3.37□□□□□ -1.87
LPP-220ENST00000617246 TMCC2O75069 709 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 PRLRP16471 622 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 SAMD14Q8IZD0 417 aaPredicted RBP3.37□□□□□ -1.87
LPP-220ENST00000617246 ZNF354BQ96LW1 612 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 EIF2AQ9BY44 585 aaKnown RBP3.37□□□□□ -1.87
LPP-220ENST00000617246 CYP3A43Q9HB55 503 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 WBP1LQ9NX94 342 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 POLLQ9UGP5 575 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 C2orf74A8MZ97 194 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 BMP7P18075 431 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 CCNFP41002 786 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 IL18R1Q13478 541 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 ASTLQ6HA08 431 aaPredicted RBP3.37□□□□□ -1.87
LPP-220ENST00000617246 R3HCC1LQ7Z5L2 792 aaKnown RBP3.37□□□□□ -1.87
LPP-220ENST00000617246 SLFN11Q7Z7L1 901 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 SETD3Q86TU7 594 aaPredicted RBP3.37□□□□□ -1.87
LPP-220ENST00000617246 UNC93AQ86WB7 457 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 FTMTQ8N4E7 242 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 PRR11Q96HE9 360 aaPredicted RBP3.37□□□□□ -1.87
LPP-220ENST00000617246 ACTRT3Q9BYD9 372 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 TMEM245Q9H330 911 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 ACTR5Q9H9F9 607 aaPredicted RBP3.37□□□□□ -1.87
LPP-220ENST00000617246 AKR1B15C9JRZ8 316 aaPredicted RBP3.37□□□□□ -1.87
LPP-220ENST00000617246 E7ENX8 843 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 PIK3CDO00329 1044 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 SLC25A17O43808 307 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 TLR5O60602 858 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 TARSP26639 723 aaKnown RBP3.37□□□□□ -1.87
LPP-220ENST00000617246 SIM1P81133 766 aaPredicted RBP3.37□□□□□ -1.87
LPP-220ENST00000617246 TAP2Q03519 686 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 C14orf80Q86SX3 495 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 ICA1LQ8NDH6 482 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 FBXL20Q96IG2 436 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 ZMYND12Q9H0C1 365 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 UBE2TQ9NPD8 197 aaPredicted RBP3.37□□□□□ -1.87
LPP-220ENST00000617246 SAMSN1Q9NSI8 373 aaKnown RBP3.37□□□□□ -1.87
LPP-220ENST00000617246 L3MBTL1Q9Y468 752 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 HEY1Q9Y5J3 304 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 MAPTP10636 758 aaKnown RBP3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms