RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 C2P06681 752 aa7.85□□□□□ -1.15
NEK3-207ENST00000617054 CTPS1P17812 591 aa7.85□□□□□ -1.15
NEK3-207ENST00000617054 SPRP35270 261 aaPredicted RBP7.85□□□□□ -1.15
NEK3-207ENST00000617054 SERPINB9P50453 376 aa7.85□□□□□ -1.15
NEK3-207ENST00000617054 LIMK2P53671 638 aa7.85□□□□□ -1.15
NEK3-207ENST00000617054 USP10Q14694 798 aaKnown RBP7.85□□□□□ -1.15
NEK3-207ENST00000617054 NEPROQ6NW34 567 aa7.85□□□□□ -1.15
NEK3-207ENST00000617054 SRLQ86TD4 932 aa7.85□□□□□ -1.15
NEK3-207ENST00000617054 ZC3HC1Q86WB0 502 aaKnown RBP7.85□□□□□ -1.15
NEK3-207ENST00000617054 CAMK1DQ8IU85 385 aa7.85□□□□□ -1.15
NEK3-207ENST00000617054 NUDCD3Q8IVD9 361 aa7.85□□□□□ -1.15
NEK3-207ENST00000617054 KLHDC8BQ8IXV7 354 aa7.85□□□□□ -1.15
NEK3-207ENST00000617054 MDGA1Q8NFP4 955 aa7.85□□□□□ -1.15
NEK3-207ENST00000617054 AGR3Q8TD06 166 aa7.85□□□□□ -1.15
NEK3-207ENST00000617054 MTBPQ96DY7 904 aa7.85□□□□□ -1.15
NEK3-207ENST00000617054 CEP295NLQ96MC4 621 aa7.85□□□□□ -1.15
NEK3-207ENST00000617054 PSKH2Q96QS6 385 aa7.85□□□□□ -1.15
NEK3-207ENST00000617054 ACE2Q9BYF1 805 aaPredicted RBP7.85□□□□□ -1.15
NEK3-207ENST00000617054 FAM96AQ9H5X1 160 aa7.85□□□□□ -1.15
NEK3-207ENST00000617054 TLE6Q9H808 572 aa7.85□□□□□ -1.15
NEK3-207ENST00000617054 ABCB8Q9NUT2 735 aa7.85□□□□□ -1.15
NEK3-207ENST00000617054 OBSL1O75147 1896 aa7.85□□□□□ -1.15
NEK3-207ENST00000617054 NEDD8-MDP1E9PL57 170 aa7.84□□□□□ -1.15
NEK3-207ENST00000617054 ITM2AO43736 263 aa7.84□□□□□ -1.15
NEK3-207ENST00000617054 EDF1O60869 148 aaKnown RBP7.84□□□□□ -1.15
NEK3-207ENST00000617054 ZMPSTE24O75844 475 aa7.84□□□□□ -1.15
NEK3-207ENST00000617054 PIGNO95427 931 aa7.84□□□□□ -1.15
NEK3-207ENST00000617054 ALPIP09923 528 aa7.84□□□□□ -1.15
NEK3-207ENST00000617054 DHRS4L1P0CG22 281 aa7.84□□□□□ -1.15
NEK3-207ENST00000617054 CRHR1P34998 444 aa7.84□□□□□ -1.15
NEK3-207ENST00000617054 PPP3CCP48454 512 aa7.84□□□□□ -1.15
NEK3-207ENST00000617054 LMAN2Q12907 356 aa7.84□□□□□ -1.15
NEK3-207ENST00000617054 LRRC73Q5JTD7 316 aa7.84□□□□□ -1.15
NEK3-207ENST00000617054 TSTD2Q5T7W7 516 aa7.84□□□□□ -1.15
NEK3-207ENST00000617054 PDPK2PQ6A1A2 396 aa7.84□□□□□ -1.15
NEK3-207ENST00000617054 TRIM68Q6AZZ1 485 aa7.84□□□□□ -1.15
NEK3-207ENST00000617054 ASTLQ6HA08 431 aaPredicted RBP7.84□□□□□ -1.15
NEK3-207ENST00000617054 C10orf107Q8IVU9 208 aa7.84□□□□□ -1.15
NEK3-207ENST00000617054 ITFG1Q8TB96 612 aa7.84□□□□□ -1.15
NEK3-207ENST00000617054 SP7Q8TDD2 431 aaPredicted RBP7.84□□□□□ -1.15
NEK3-207ENST00000617054 USP13Q92995 863 aaPredicted RBP7.84□□□□□ -1.15
NEK3-207ENST00000617054 SGF29Q96ES7 293 aa7.84□□□□□ -1.15
NEK3-207ENST00000617054 OMDQ99983 421 aa7.84□□□□□ -1.15
NEK3-207ENST00000617054 IGFLR1Q9H665 355 aa7.84□□□□□ -1.15
NEK3-207ENST00000617054 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.84□□□□□ -1.15
NEK3-207ENST00000617054 SEPT3Q9UH03 358 aa7.84□□□□□ -1.15
NEK3-207ENST00000617054 INTS6Q9UL03 887 aaKnown RBP7.84□□□□□ -1.15
NEK3-207ENST00000617054 PCDHB9Q9Y5E1 797 aa7.84□□□□□ -1.15
NEK3-207ENST00000617054 RAI2Q9Y5P3 530 aa7.84□□□□□ -1.15
NEK3-207ENST00000617054 WNT6Q9Y6F9 365 aa7.84□□□□□ -1.15
NEK3-207ENST00000617054 CHD5Q8TDI0 1954 aa7.84□□□□□ -1.15
NEK3-207ENST00000617054 SPEGQ15772 3267 aa7.84□□□□□ -1.15
NEK3-207ENST00000617054 CCDC85CA6NKD9 419 aa7.84□□□□□ -1.15
NEK3-207ENST00000617054 PRMT3O60678 531 aa7.84□□□□□ -1.15
NEK3-207ENST00000617054 HLA-FP30511 346 aa7.84□□□□□ -1.15
NEK3-207ENST00000617054 CCR10P46092 362 aa7.84□□□□□ -1.15
NEK3-207ENST00000617054 SLC18A1P54219 525 aa7.84□□□□□ -1.15
NEK3-207ENST00000617054 RHOAP61586 193 aa7.84□□□□□ -1.15
NEK3-207ENST00000617054 PRAMEP78395 509 aa7.84□□□□□ -1.15
NEK3-207ENST00000617054 BST1Q10588 318 aa7.84□□□□□ -1.15
NEK3-207ENST00000617054 SEMA3AQ14563 771 aa7.84□□□□□ -1.15
NEK3-207ENST00000617054 FASTKD1Q53R41 847 aaKnown RBP7.84□□□□□ -1.15
NEK3-207ENST00000617054 FAM43BQ6ZT52 329 aaPredicted RBP7.84□□□□□ -1.15
NEK3-207ENST00000617054 SETD3Q86TU7 594 aaPredicted RBP7.84□□□□□ -1.15
NEK3-207ENST00000617054 C10orf67Q8IYJ2 551 aa7.84□□□□□ -1.15
NEK3-207ENST00000617054 RYBPQ8N488 228 aaPredicted RBP7.84□□□□□ -1.15
NEK3-207ENST00000617054 FITM2Q8N6M3 262 aa7.84□□□□□ -1.15
NEK3-207ENST00000617054 PAF1Q8N7H5 531 aa7.84□□□□□ -1.15
NEK3-207ENST00000617054 SORCS1Q8WY21 1168 aa7.84□□□□□ -1.15
NEK3-207ENST00000617054 ALG14Q96F25 216 aa7.84□□□□□ -1.15
NEK3-207ENST00000617054 ELMO2Q96JJ3 720 aa7.84□□□□□ -1.15
NEK3-207ENST00000617054 LRRC3BQ96PB8 259 aa7.84□□□□□ -1.15
NEK3-207ENST00000617054 GCNAQ96QF7 691 aa7.84□□□□□ -1.15
NEK3-207ENST00000617054 MGME1Q9BQP7 344 aa7.84□□□□□ -1.15
NEK3-207ENST00000617054 SHCBP1LQ9BZQ2 653 aa7.84□□□□□ -1.15
NEK3-207ENST00000617054 NSRP1Q9H0G5 558 aaKnown RBP7.84□□□□□ -1.15
NEK3-207ENST00000617054 SSU72Q9NP77 194 aaKnown RBP7.84□□□□□ -1.15
NEK3-207ENST00000617054 VPS45Q9NRW7 570 aa7.84□□□□□ -1.15
NEK3-207ENST00000617054 EVLQ9UI08 416 aaPredicted RBP7.84□□□□□ -1.15
NEK3-207ENST00000617054 LSM7Q9UK45 103 aaKnown RBP7.84□□□□□ -1.15
NEK3-207ENST00000617054 YBX2Q9Y2T7 364 aaKnown RBP7.84□□□□□ -1.15
NEK3-207ENST00000617054 OR51B4Q9Y5P0 310 aa7.84□□□□□ -1.15
NEK3-207ENST00000617054 ANKRD36A6QL64 1941 aa7.84□□□□□ -1.15
NEK3-207ENST00000617054 HEATR9A2RTY3 570 aa7.84□□□□□ -1.15
NEK3-207ENST00000617054 SRRM3A6NNA2 597 aaPredicted RBP7.84□□□□□ -1.15
NEK3-207ENST00000617054 CFAP99D6REC4 459 aa7.84□□□□□ -1.15
NEK3-207ENST00000617054 TK2O00142 265 aa7.84□□□□□ -1.15
NEK3-207ENST00000617054 CLASP2O75122 1294 aaKnown RBP7.84□□□□□ -1.15
NEK3-207ENST00000617054 ALDH3A1P30838 453 aa7.84□□□□□ -1.15
NEK3-207ENST00000617054 CCNFP41002 786 aa7.84□□□□□ -1.15
NEK3-207ENST00000617054 TRAF2Q12933 501 aa7.84□□□□□ -1.15
NEK3-207ENST00000617054 ACCSLQ4AC99 568 aa7.84□□□□□ -1.15
NEK3-207ENST00000617054 HTR3DQ70Z44 454 aa7.84□□□□□ -1.15
NEK3-207ENST00000617054 ANKS4BQ8N8V4 417 aa7.84□□□□□ -1.15
NEK3-207ENST00000617054 KCTD4Q8WVF5 259 aa7.84□□□□□ -1.15
NEK3-207ENST00000617054 TADA1Q96BN2 335 aa7.84□□□□□ -1.15
NEK3-207ENST00000617054 ZFYVE19Q96K21 471 aa7.84□□□□□ -1.15
NEK3-207ENST00000617054 TSSK1BQ9BXA7 367 aa7.84□□□□□ -1.15
NEK3-207ENST00000617054 ARNT2Q9HBZ2 717 aa7.84□□□□□ -1.15
NEK3-207ENST00000617054 STOML2Q9UJZ1 356 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms