RNA–Protein interactions for RNA: ENST00000616865.4

UBXN1-218, Transcript of UBX domain protein 1, humanhuman

TSL 5 BASIC

Gene UBXN1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-218ENST00000616865 PIP4K2CQ8TBX8 421 aa15.05■□□□□ -0
UBXN1-218ENST00000616865 PTPRN2Q92932 1015 aa15.05■□□□□ -0
UBXN1-218ENST00000616865 MS4A14Q96JA4 679 aa15.05■□□□□ -0
UBXN1-218ENST00000616865 SERAC1Q96JX3 654 aa15.05■□□□□ -0
UBXN1-218ENST00000616865 FAM129BQ96TA1 746 aa15.05■□□□□ -0
UBXN1-218ENST00000616865 FERMT1Q9BQL6 677 aa15.05■□□□□ -0
UBXN1-218ENST00000616865 NOL6Q9H6R4 1146 aaKnown RBP15.05■□□□□ -0
UBXN1-218ENST00000616865 LRRC19Q9H756 370 aa15.05■□□□□ -0
UBXN1-218ENST00000616865 DTLQ9NZJ0 730 aa15.05■□□□□ -0
UBXN1-218ENST00000616865 SAE1Q9UBE0 346 aaPredicted RBP15.05■□□□□ -0
UBXN1-218ENST00000616865 SLCO3A1Q9UIG8 710 aa15.05■□□□□ -0
UBXN1-218ENST00000616865 BPTFQ12830 3046 aa15.05■□□□□ -0
UBXN1-218ENST00000616865 ZSCAN5CA6NGD5 496 aaPredicted RBP15.04■□□□□ -0
UBXN1-218ENST00000616865 TLR4O00206 839 aa15.04■□□□□ -0
UBXN1-218ENST00000616865 LATO43561 262 aa15.04■□□□□ -0
UBXN1-218ENST00000616865 KDELR3O43731 214 aa15.04■□□□□ -0
UBXN1-218ENST00000616865 ZNF500O60304 480 aaPredicted RBP15.04■□□□□ -0
UBXN1-218ENST00000616865 PECAM1P16284 738 aaPredicted RBP15.04■□□□□ -0
UBXN1-218ENST00000616865 DRD3P35462 400 aa15.04■□□□□ -0
UBXN1-218ENST00000616865 NNMTP40261 264 aa15.04■□□□□ -0
UBXN1-218ENST00000616865 EIF2S3P41091 472 aaKnown RBP15.04■□□□□ -0
UBXN1-218ENST00000616865 STK19P49842 368 aaPredicted RBP15.04■□□□□ -0
UBXN1-218ENST00000616865 EIF3EP60228 445 aaKnown RBP15.04■□□□□ -0
UBXN1-218ENST00000616865 OTUD4Q01804 1114 aaKnown RBP15.04■□□□□ -0
UBXN1-218ENST00000616865 ADCY2Q08462 1091 aa15.04■□□□□ -0
UBXN1-218ENST00000616865 GALNT2Q10471 571 aa15.04■□□□□ -0
UBXN1-218ENST00000616865 AP1B1Q10567 949 aa15.04■□□□□ -0
UBXN1-218ENST00000616865 ELAVL3Q14576 367 aaKnown RBP15.04■□□□□ -0
UBXN1-218ENST00000616865 AFMIDQ63HM1 303 aa15.04■□□□□ -0
UBXN1-218ENST00000616865 NAPEPLDQ6IQ20 393 aa15.04■□□□□ -0
UBXN1-218ENST00000616865 TIGD7Q6NT04 549 aaPredicted RBP15.04■□□□□ -0
UBXN1-218ENST00000616865 RETSATQ6NUM9 610 aa15.04■□□□□ -0
UBXN1-218ENST00000616865 FBXL19Q6PCT2 694 aa15.04■□□□□ -0
UBXN1-218ENST00000616865 RASGEF1CQ8N431 466 aa15.04■□□□□ -0
UBXN1-218ENST00000616865 ACTL9Q8TC94 416 aa15.04■□□□□ -0
UBXN1-218ENST00000616865 ACTRT1Q8TDG2 376 aa15.04■□□□□ -0
UBXN1-218ENST00000616865 FAM131CQ96AQ9 280 aa15.04■□□□□ -0
UBXN1-218ENST00000616865 RPL10LQ96L21 214 aaKnown RBP15.04■□□□□ -0
UBXN1-218ENST00000616865 UBL7Q96S82 380 aaPredicted RBP15.04■□□□□ -0
UBXN1-218ENST00000616865 HERPUD2Q9BSE4 406 aa15.04■□□□□ -0
UBXN1-218ENST00000616865 FRMD8P1Q9BZ68 369 aaPredicted RBP15.04■□□□□ -0
UBXN1-218ENST00000616865 KLC2Q9H0B6 622 aa15.04■□□□□ -0
UBXN1-218ENST00000616865 BRD8Q9H0E9 1235 aa15.04■□□□□ -0
UBXN1-218ENST00000616865 ERVMER34-1Q9H9K5 563 aa15.04■□□□□ -0
UBXN1-218ENST00000616865 RNF14Q9UBS8 474 aa15.04■□□□□ -0
UBXN1-218ENST00000616865 IPO11Q9UI26 975 aaKnown RBP15.04■□□□□ -0
UBXN1-218ENST00000616865 TTC7AQ9ULT0 858 aaPredicted RBP15.04■□□□□ -0
UBXN1-218ENST00000616865 OR51B4Q9Y5P0 310 aa15.04■□□□□ -0
UBXN1-218ENST00000616865 GCN1Q92616 2671 aaKnown RBP15.04■□□□□ -0
UBXN1-218ENST00000616865 TCRBV7S2A1N4TA0A589 114 aa15.03■□□□□ -0
UBXN1-218ENST00000616865 KRIT1O00522 736 aa15.03■□□□□ -0
UBXN1-218ENST00000616865 TLX3O43711 291 aaPredicted RBP15.03■□□□□ -0
UBXN1-218ENST00000616865 SNAP91O60641 907 aa15.03■□□□□ -0
UBXN1-218ENST00000616865 IL1BP01584 269 aa15.03■□□□□ -0
UBXN1-218ENST00000616865 ITPKBP27987 946 aa15.03■□□□□ -0
UBXN1-218ENST00000616865 GARSP41250 739 aaKnown RBP15.03■□□□□ -0
UBXN1-218ENST00000616865 IL10RBQ08334 325 aa15.03■□□□□ -0
UBXN1-218ENST00000616865 SLC10A2Q12908 348 aaPredicted RBP15.03■□□□□ -0
UBXN1-218ENST00000616865 TARDBPQ13148 414 aaKnown RBP eCLIP15.03■□□□□ -0
UBXN1-218ENST00000616865 TUBB2AQ13885 445 aa15.03■□□□□ -0
UBXN1-218ENST00000616865 NOMO1Q15155 1222 aa15.03■□□□□ -0
UBXN1-218ENST00000616865 DARS2Q6PI48 645 aaKnown RBP15.03■□□□□ -0
UBXN1-218ENST00000616865 ZC3H18Q86VM9 953 aaKnown RBP15.03■□□□□ -0
UBXN1-218ENST00000616865 CDKL3Q8IVW4 592 aaPredicted RBP15.03■□□□□ -0
UBXN1-218ENST00000616865 TP53INP2Q8IXH6 220 aa15.03■□□□□ -0
UBXN1-218ENST00000616865 BBS5Q8N3I7 341 aa15.03■□□□□ -0
UBXN1-218ENST00000616865 TFB1MQ8WVM0 346 aaKnown RBP15.03■□□□□ -0
UBXN1-218ENST00000616865 FAM118BQ9BPY3 351 aa15.03■□□□□ -0
UBXN1-218ENST00000616865 TUBB2BQ9BVA1 445 aa15.03■□□□□ -0
UBXN1-218ENST00000616865 NRSN2Q9GZP1 204 aa15.03■□□□□ -0
UBXN1-218ENST00000616865 HOMER3Q9NSC5 361 aa15.03■□□□□ -0
UBXN1-218ENST00000616865 SEPT10Q9P0V9 454 aa15.03■□□□□ -0
UBXN1-218ENST00000616865 UBA2Q9UBT2 640 aaPredicted RBP15.03■□□□□ -0
UBXN1-218ENST00000616865 VPS51Q9UID3 782 aa15.03■□□□□ -0
UBXN1-218ENST00000616865 SHROOM3Q8TF72 1996 aa15.03■□□□□ -0
UBXN1-218ENST00000616865 TBC1D3DA0A087WVF3 549 aa15.02■□□□□ -0
UBXN1-218ENST00000616865 TBC1D3IA0A087WXS9 549 aa15.02■□□□□ -0
UBXN1-218ENST00000616865 TBC1D3EA0A087X179 549 aa15.02■□□□□ -0
UBXN1-218ENST00000616865 TBC1D3KA0A087X1G2 549 aa15.02■□□□□ -0
UBXN1-218ENST00000616865 TBC1D3FA6NER0 549 aaPredicted RBP15.02■□□□□ -0
UBXN1-218ENST00000616865 HACD1B0YJ81 288 aa15.02■□□□□ -0
UBXN1-218ENST00000616865 TBC1D3LB9A6J9 549 aa15.02■□□□□ -0
UBXN1-218ENST00000616865 PRAMEF11O60813 436 aa15.02■□□□□ -0
UBXN1-218ENST00000616865 STK10O94804 968 aaKnown RBP15.02■□□□□ -0
UBXN1-218ENST00000616865 TBC1D3HP0C7X1 549 aa15.02■□□□□ -0
UBXN1-218ENST00000616865 VAV1P15498 845 aa15.02■□□□□ -0
UBXN1-218ENST00000616865 GLDCP23378 1020 aa15.02■□□□□ -0
UBXN1-218ENST00000616865 RXRGP48443 463 aa15.02■□□□□ -0
UBXN1-218ENST00000616865 SEMG2Q02383 582 aa15.02■□□□□ -0
UBXN1-218ENST00000616865 CKAP4Q07065 602 aaKnown RBP15.02■□□□□ -0
UBXN1-218ENST00000616865 SLC20A2Q08357 652 aa15.02■□□□□ -0
UBXN1-218ENST00000616865 BNIP3Q12983 259 aa15.02■□□□□ -0
UBXN1-218ENST00000616865 KLF1Q13351 362 aaPredicted RBP15.02■□□□□ -0
UBXN1-218ENST00000616865 ILKQ13418 452 aa15.02■□□□□ -0
UBXN1-218ENST00000616865 XRCC4Q13426 336 aa15.02■□□□□ -0
UBXN1-218ENST00000616865 SNX1Q13596 522 aa15.02■□□□□ -0
UBXN1-218ENST00000616865 RTP5Q14D33 572 aa15.02■□□□□ -0
UBXN1-218ENST00000616865 ACCSLQ4AC99 568 aa15.02■□□□□ -0
UBXN1-218ENST00000616865 TBC1D3GQ6DHY5 549 aa15.02■□□□□ -0
UBXN1-218ENST00000616865 TBC1D3CQ6IPX1 549 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms