RNA–Protein interactions for RNA: ENST00000616407.1

PPP4R3B-206, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,385 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-206ENST00000616407 CDHR3Q6ZTQ4 885 aa13.27□□□□□ -0.29
PPP4R3B-206ENST00000616407 NPAS4Q8IUM7 802 aa13.27□□□□□ -0.29
PPP4R3B-206ENST00000616407 FNDC5Q8NAU1 212 aa13.27□□□□□ -0.29
PPP4R3B-206ENST00000616407 GDPD5Q8WTR4 605 aa13.27□□□□□ -0.29
PPP4R3B-206ENST00000616407 CNBD2Q96M20 576 aa13.27□□□□□ -0.29
PPP4R3B-206ENST00000616407 SLC2A13Q96QE2 648 aa13.27□□□□□ -0.29
PPP4R3B-206ENST00000616407 SLC25A23Q9BV35 468 aa13.27□□□□□ -0.29
PPP4R3B-206ENST00000616407 ASB8Q9H765 288 aa13.27□□□□□ -0.29
PPP4R3B-206ENST00000616407 ACTR8Q9H981 624 aa13.27□□□□□ -0.29
PPP4R3B-206ENST00000616407 TLR6Q9Y2C9 796 aa13.27□□□□□ -0.29
PPP4R3B-206ENST00000616407 HS3ST4Q9Y661 456 aa13.27□□□□□ -0.29
PPP4R3B-206ENST00000616407 C1RP00736 705 aa13.27□□□□□ -0.29
PPP4R3B-206ENST00000616407 CKBP12277 381 aa13.27□□□□□ -0.29
PPP4R3B-206ENST00000616407 ATP6V1B1P15313 513 aa13.27□□□□□ -0.29
PPP4R3B-206ENST00000616407 AFF1P51825 1210 aaKnown RBP13.27□□□□□ -0.29
PPP4R3B-206ENST00000616407 ZBTB6Q15916 424 aa13.27□□□□□ -0.29
PPP4R3B-206ENST00000616407 AASDHQ4L235 1098 aaPredicted RBP13.27□□□□□ -0.29
PPP4R3B-206ENST00000616407 TSTD2Q5T7W7 516 aa13.27□□□□□ -0.29
PPP4R3B-206ENST00000616407 ARHGAP36Q6ZRI8 547 aa13.27□□□□□ -0.29
PPP4R3B-206ENST00000616407 OR56A4Q8NGH8 313 aa13.27□□□□□ -0.29
PPP4R3B-206ENST00000616407 ANKRD27Q96NW4 1050 aa13.27□□□□□ -0.29
PPP4R3B-206ENST00000616407 MTIF3Q9H2K0 278 aaKnown RBP13.27□□□□□ -0.29
PPP4R3B-206ENST00000616407 EIF3LQ9Y262 564 aaKnown RBP13.27□□□□□ -0.29
PPP4R3B-206ENST00000616407 NDUFAF1Q9Y375 327 aa13.27□□□□□ -0.29
PPP4R3B-206ENST00000616407 TRAFD1O14545 582 aaPredicted RBP13.26□□□□□ -0.29
PPP4R3B-206ENST00000616407 ITM2AO43736 263 aa13.26□□□□□ -0.29
PPP4R3B-206ENST00000616407 SYNCRIPO60506 623 aaKnown RBP13.26□□□□□ -0.29
PPP4R3B-206ENST00000616407 IL4RP24394 825 aa13.26□□□□□ -0.29
PPP4R3B-206ENST00000616407 NEK3P51956 506 aa13.26□□□□□ -0.29
PPP4R3B-206ENST00000616407 PLOD1Q02809 727 aaPredicted RBP13.26□□□□□ -0.29
PPP4R3B-206ENST00000616407 ILF2Q12905 390 aaKnown RBP13.26□□□□□ -0.29
PPP4R3B-206ENST00000616407 FBXL22Q6P050 247 aa13.26□□□□□ -0.29
PPP4R3B-206ENST00000616407 AFTPHQ6ULP2 937 aa13.26□□□□□ -0.29
PPP4R3B-206ENST00000616407 NKAPQ8N5F7 415 aaKnown RBP13.26□□□□□ -0.29
PPP4R3B-206ENST00000616407 PCDHGB4Q9UN71 923 aa13.26□□□□□ -0.29
PPP4R3B-206ENST00000616407 PCDHGC4Q9Y5F7 938 aa13.26□□□□□ -0.29
PPP4R3B-206ENST00000616407 ENO4A6NNW6 628 aa13.26□□□□□ -0.29
PPP4R3B-206ENST00000616407 PEX11AO75192 247 aa13.26□□□□□ -0.29
PPP4R3B-206ENST00000616407 RFPL1O75677 317 aa13.26□□□□□ -0.29
PPP4R3B-206ENST00000616407 NDST3O95803 873 aa13.26□□□□□ -0.29
PPP4R3B-206ENST00000616407 CCNG1P51959 295 aa13.26□□□□□ -0.29
PPP4R3B-206ENST00000616407 ACBD5Q5T8D3 534 aaPredicted RBP13.26□□□□□ -0.29
PPP4R3B-206ENST00000616407 SCIMPQ6UWF3 145 aa13.26□□□□□ -0.29
PPP4R3B-206ENST00000616407 SZRD1Q7Z422 152 aa13.26□□□□□ -0.29
PPP4R3B-206ENST00000616407 FBXO22Q8NEZ5 403 aa13.26□□□□□ -0.29
PPP4R3B-206ENST00000616407 DENND1AQ8TEH3 1009 aa13.26□□□□□ -0.29
PPP4R3B-206ENST00000616407 ZMYM5Q9UJ78 669 aa13.26□□□□□ -0.29
PPP4R3B-206ENST00000616407 FAF1Q9UNN5 650 aaPredicted RBP13.26□□□□□ -0.29
PPP4R3B-206ENST00000616407 RPL26L1Q9UNX3 145 aaKnown RBP13.26□□□□□ -0.29
PPP4R3B-206ENST00000616407 J3KR12 359 aa13.26□□□□□ -0.29
PPP4R3B-206ENST00000616407 ZNF623O75123 536 aa13.26□□□□□ -0.29
PPP4R3B-206ENST00000616407 HSPA1AP0DMV8 641 aaKnown RBP13.26□□□□□ -0.29
PPP4R3B-206ENST00000616407 HSPA1BP0DMV9 641 aaKnown RBP13.26□□□□□ -0.29
PPP4R3B-206ENST00000616407 SP100P23497 879 aaPredicted RBP13.26□□□□□ -0.29
PPP4R3B-206ENST00000616407 MSX2P35548 267 aaPredicted RBP13.26□□□□□ -0.29
PPP4R3B-206ENST00000616407 SLC1A2P43004 574 aa13.26□□□□□ -0.29
PPP4R3B-206ENST00000616407 TTPAP49638 278 aa13.26□□□□□ -0.29
PPP4R3B-206ENST00000616407 CNSTQ6PJW8 725 aa13.26□□□□□ -0.29
PPP4R3B-206ENST00000616407 OR10T2Q8NGX3 314 aa13.26□□□□□ -0.29
PPP4R3B-206ENST00000616407 DNAJC1Q96KC8 554 aaKnown RBP13.26□□□□□ -0.29
PPP4R3B-206ENST00000616407 ASB2Q96Q27 587 aa13.26□□□□□ -0.29
PPP4R3B-206ENST00000616407 ZNF184Q99676 751 aaPredicted RBP13.26□□□□□ -0.29
PPP4R3B-206ENST00000616407 SMOC2Q9H3U7 446 aa13.26□□□□□ -0.29
PPP4R3B-206ENST00000616407 SLC4A7Q9Y6M7 1214 aa13.26□□□□□ -0.29
PPP4R3B-206ENST00000616407 ZFP37Q9Y6Q3 630 aaPredicted RBP13.26□□□□□ -0.29
PPP4R3B-206ENST00000616407 RAD51BO15315 384 aa13.25□□□□□ -0.29
PPP4R3B-206ENST00000616407 PSMA4P25789 261 aaKnown RBP13.25□□□□□ -0.29
PPP4R3B-206ENST00000616407 FRG1Q14331 258 aaKnown RBP13.25□□□□□ -0.29
PPP4R3B-206ENST00000616407 MIER2Q8N344 545 aa13.25□□□□□ -0.29
PPP4R3B-206ENST00000616407 OR6Y1Q8NGX8 325 aa13.25□□□□□ -0.29
PPP4R3B-206ENST00000616407 CYGBQ8WWM9 190 aa13.25□□□□□ -0.29
PPP4R3B-206ENST00000616407 TCRBV5S1A1TA0A578 114 aa13.25□□□□□ -0.29
PPP4R3B-206ENST00000616407 TMCC1O94876 653 aa13.25□□□□□ -0.29
PPP4R3B-206ENST00000616407 SLC2A4P14672 509 aa13.25□□□□□ -0.29
PPP4R3B-206ENST00000616407 GABRR2P28476 465 aa13.25□□□□□ -0.29
PPP4R3B-206ENST00000616407 MC4RP32245 332 aa13.25□□□□□ -0.29
PPP4R3B-206ENST00000616407 ATP6AP1LQ52LC2 224 aa13.25□□□□□ -0.29
PPP4R3B-206ENST00000616407 CACHD1Q5VU97 1274 aa13.25□□□□□ -0.29
PPP4R3B-206ENST00000616407 ZYG11AQ6WRX3 759 aa13.25□□□□□ -0.29
PPP4R3B-206ENST00000616407 KIAA0408Q6ZU52 694 aa13.25□□□□□ -0.29
PPP4R3B-206ENST00000616407 CUZD1Q86UP6 607 aa13.25□□□□□ -0.29
PPP4R3B-206ENST00000616407 CLEC4FQ8N1N0 589 aa13.25□□□□□ -0.29
PPP4R3B-206ENST00000616407 RP9Q8TA86 221 aaKnown RBP13.25□□□□□ -0.29
PPP4R3B-206ENST00000616407 CORO1BQ9BR76 489 aa13.25□□□□□ -0.29
PPP4R3B-206ENST00000616407 EMILIN2Q9BXX0 1053 aa13.25□□□□□ -0.29
PPP4R3B-206ENST00000616407 ASPSCR1Q9BZE9 553 aa13.25□□□□□ -0.29
PPP4R3B-206ENST00000616407 BTRCQ9Y297 605 aa13.25□□□□□ -0.29
PPP4R3B-206ENST00000616407 TRAF6Q9Y4K3 522 aa13.25□□□□□ -0.29
PPP4R3B-206ENST00000616407 IPO13O94829 963 aaKnown RBP13.25□□□□□ -0.29
PPP4R3B-206ENST00000616407 SERPINA4P29622 427 aa13.25□□□□□ -0.29
PPP4R3B-206ENST00000616407 RPS24P62847 133 aaKnown RBP13.25□□□□□ -0.29
PPP4R3B-206ENST00000616407 IL10RBQ08334 325 aa13.25□□□□□ -0.29
PPP4R3B-206ENST00000616407 PEX6Q13608 980 aa13.25□□□□□ -0.29
PPP4R3B-206ENST00000616407 GTF2H3Q13889 308 aa13.25□□□□□ -0.29
PPP4R3B-206ENST00000616407 BOP1Q14137 746 aaKnown RBP13.25□□□□□ -0.29
PPP4R3B-206ENST00000616407 HEXDCQ8WVB3 486 aa13.25□□□□□ -0.29
PPP4R3B-206ENST00000616407 CCSER2Q9H7U1 834 aa13.25□□□□□ -0.29
PPP4R3B-206ENST00000616407 DNAJB4Q9UDY4 337 aa13.25□□□□□ -0.29
PPP4R3B-206ENST00000616407 ZMYND8Q9ULU4 1186 aaPredicted RBP13.25□□□□□ -0.29
PPP4R3B-206ENST00000616407 SLC38A8A6NNN8 435 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms