RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 SNX6Q9UNH7 406 aa9.49□□□□□ -0.89
CLTCL1-208ENST00000615606 R3HDM2Q9Y2K5 976 aaKnown RBP9.49□□□□□ -0.89
CLTCL1-208ENST00000615606 GRIN2DO15399 1336 aa9.49□□□□□ -0.89
CLTCL1-208ENST00000615606 PRMT5O14744 637 aaPredicted RBP9.49□□□□□ -0.89
CLTCL1-208ENST00000615606 MLYCDO95822 493 aa9.49□□□□□ -0.89
CLTCL1-208ENST00000615606 CHRNA1P02708 482 aa9.49□□□□□ -0.89
CLTCL1-208ENST00000615606 ITGA2BP08514 1039 aa9.49□□□□□ -0.89
CLTCL1-208ENST00000615606 PABPC1P11940 636 aaKnown RBP9.49□□□□□ -0.89
CLTCL1-208ENST00000615606 TFEBP19484 476 aa9.49□□□□□ -0.89
CLTCL1-208ENST00000615606 CPA2P48052 419 aa9.49□□□□□ -0.89
CLTCL1-208ENST00000615606 NME5P56597 212 aa9.49□□□□□ -0.89
CLTCL1-208ENST00000615606 CRYMQ14894 314 aa9.49□□□□□ -0.89
CLTCL1-208ENST00000615606 RHBDF2Q6PJF5 856 aa9.49□□□□□ -0.89
CLTCL1-208ENST00000615606 CRELD2Q6UXH1 353 aaPredicted RBP9.49□□□□□ -0.89
CLTCL1-208ENST00000615606 PARP9Q8IXQ6 854 aa9.49□□□□□ -0.89
CLTCL1-208ENST00000615606 PHC3Q8NDX5 983 aa9.49□□□□□ -0.89
CLTCL1-208ENST00000615606 OR4K2Q8NGD2 314 aa9.49□□□□□ -0.89
CLTCL1-208ENST00000615606 TSC22D3Q99576 134 aa9.49□□□□□ -0.89
CLTCL1-208ENST00000615606 ZCWPW1Q9H0M4 648 aa9.49□□□□□ -0.89
CLTCL1-208ENST00000615606 SDCBP2Q9H190 292 aa9.49□□□□□ -0.89
CLTCL1-208ENST00000615606 ABCB8Q9NUT2 735 aa9.49□□□□□ -0.89
CLTCL1-208ENST00000615606 SOHLH2Q9NX45 425 aa9.49□□□□□ -0.89
CLTCL1-208ENST00000615606 SH3BP4Q9P0V3 963 aa9.49□□□□□ -0.89
CLTCL1-208ENST00000615606 MAPRE3Q9UPY8 281 aa9.49□□□□□ -0.89
CLTCL1-208ENST00000615606 IFI35P80217 286 aaPredicted RBP9.49□□□□□ -0.89
CLTCL1-208ENST00000615606 AGKQ53H12 422 aa9.49□□□□□ -0.89
CLTCL1-208ENST00000615606 CERCAMQ5T4B2 595 aa9.49□□□□□ -0.89
CLTCL1-208ENST00000615606 TXNDC11Q6PKC3 985 aa9.49□□□□□ -0.89
CLTCL1-208ENST00000615606 PHYKPLQ8IUZ5 450 aa9.49□□□□□ -0.89
CLTCL1-208ENST00000615606 CLEC4FQ8N1N0 589 aa9.49□□□□□ -0.89
CLTCL1-208ENST00000615606 MREGQ8N565 214 aa9.49□□□□□ -0.89
CLTCL1-208ENST00000615606 PTGR2Q8N8N7 351 aaPredicted RBP9.49□□□□□ -0.89
CLTCL1-208ENST00000615606 SMG8Q8ND04 991 aaKnown RBP9.49□□□□□ -0.89
CLTCL1-208ENST00000615606 SLC35F5Q8WV83 523 aa9.49□□□□□ -0.89
CLTCL1-208ENST00000615606 PLEKHA8Q96JA3 519 aa9.49□□□□□ -0.89
CLTCL1-208ENST00000615606 NDNQ99608 321 aa9.49□□□□□ -0.89
CLTCL1-208ENST00000615606 MRPL57Q9BQC6 102 aaKnown RBP9.49□□□□□ -0.89
CLTCL1-208ENST00000615606 SMOC2Q9H3U7 446 aa9.49□□□□□ -0.89
CLTCL1-208ENST00000615606 SNX10Q9Y5X0 201 aa9.49□□□□□ -0.89
CLTCL1-208ENST00000615606 FAM47E-STBD1D6RA91 191 aa9.48□□□□□ -0.89
CLTCL1-208ENST00000615606 EEF1DP29692 281 aaKnown RBP9.48□□□□□ -0.89
CLTCL1-208ENST00000615606 PPP2R1BP30154 601 aa9.48□□□□□ -0.89
CLTCL1-208ENST00000615606 GDI1P31150 447 aa9.48□□□□□ -0.89
CLTCL1-208ENST00000615606 HOXD13P35453 343 aa9.48□□□□□ -0.89
CLTCL1-208ENST00000615606 RFX3P48380 749 aa9.48□□□□□ -0.89
CLTCL1-208ENST00000615606 GPR15P49685 360 aa9.48□□□□□ -0.89
CLTCL1-208ENST00000615606 PLIN5Q00G26 463 aa9.48□□□□□ -0.89
CLTCL1-208ENST00000615606 SYPL2Q5VXT5 272 aa9.48□□□□□ -0.89
CLTCL1-208ENST00000615606 TXNDC8Q6A555 127 aa9.48□□□□□ -0.89
CLTCL1-208ENST00000615606 ZNF280BQ86YH2 543 aa9.48□□□□□ -0.89
CLTCL1-208ENST00000615606 ZC3H3Q8IXZ2 948 aaKnown RBP9.48□□□□□ -0.89
CLTCL1-208ENST00000615606 ZNF784Q8NCA9 323 aaPredicted RBP9.48□□□□□ -0.89
CLTCL1-208ENST00000615606 FLCNQ8NFG4 579 aa9.48□□□□□ -0.89
CLTCL1-208ENST00000615606 ATXN2LQ8WWM7 1075 aaKnown RBP9.48□□□□□ -0.89
CLTCL1-208ENST00000615606 ZNF599Q96NL3 588 aa9.48□□□□□ -0.89
CLTCL1-208ENST00000615606 FAM83DQ9H4H8 585 aa9.48□□□□□ -0.89
CLTCL1-208ENST00000615606 FCF1Q9Y324 198 aaKnown RBP9.48□□□□□ -0.89
CLTCL1-208ENST00000615606 VWA7Q9Y334 891 aa9.48□□□□□ -0.89
CLTCL1-208ENST00000615606 TJP1Q07157 1748 aa9.48□□□□□ -0.89
CLTCL1-208ENST00000615606 SNUPNO95149 360 aaKnown RBP9.48□□□□□ -0.89
CLTCL1-208ENST00000615606 TIMP1P01033 207 aa9.48□□□□□ -0.89
CLTCL1-208ENST00000615606 CD48P09326 243 aa9.48□□□□□ -0.89
CLTCL1-208ENST00000615606 TFE3P19532 575 aaPredicted RBP9.48□□□□□ -0.89
CLTCL1-208ENST00000615606 HPCAL1P37235 193 aa9.48□□□□□ -0.89
CLTCL1-208ENST00000615606 MTHFRP42898 656 aa9.48□□□□□ -0.89
CLTCL1-208ENST00000615606 CCR3P51677 355 aa9.48□□□□□ -0.89
CLTCL1-208ENST00000615606 SEC13P55735 322 aa9.48□□□□□ -0.89
CLTCL1-208ENST00000615606 CACNG1Q06432 222 aa9.48□□□□□ -0.89
CLTCL1-208ENST00000615606 CTBP1Q13363 440 aa9.48□□□□□ -0.89
CLTCL1-208ENST00000615606 FLOT2Q14254 428 aa9.48□□□□□ -0.89
CLTCL1-208ENST00000615606 FUT11Q495W5 492 aa9.48□□□□□ -0.89
CLTCL1-208ENST00000615606 CEP70Q8NHQ1 597 aa9.48□□□□□ -0.89
CLTCL1-208ENST00000615606 ASZ1Q8WWH4 475 aa9.48□□□□□ -0.89
CLTCL1-208ENST00000615606 PSMG2Q969U7 264 aa9.48□□□□□ -0.89
CLTCL1-208ENST00000615606 RHOJQ9H4E5 214 aa9.48□□□□□ -0.89
CLTCL1-208ENST00000615606 CCSER2Q9H7U1 834 aa9.48□□□□□ -0.89
CLTCL1-208ENST00000615606 TDP1Q9NUW8 608 aa9.48□□□□□ -0.89
CLTCL1-208ENST00000615606 AJAP1Q9UKB5 411 aaPredicted RBP9.48□□□□□ -0.89
CLTCL1-208ENST00000615606 ASF1AQ9Y294 204 aa9.48□□□□□ -0.89
CLTCL1-208ENST00000615606 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.48□□□□□ -0.89
CLTCL1-208ENST00000615606 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.48□□□□□ -0.89
CLTCL1-208ENST00000615606 ILVBLA1L0T0 632 aa9.48□□□□□ -0.89
CLTCL1-208ENST00000615606 SGTAO43765 313 aa9.48□□□□□ -0.89
CLTCL1-208ENST00000615606 TBX18O95935 607 aa9.48□□□□□ -0.89
CLTCL1-208ENST00000615606 PDHA1P08559 390 aa9.48□□□□□ -0.89
CLTCL1-208ENST00000615606 ADH5P11766 374 aa9.48□□□□□ -0.89
CLTCL1-208ENST00000615606 SOX11P35716 441 aa9.48□□□□□ -0.89
CLTCL1-208ENST00000615606 HCAR3P49019 387 aa9.48□□□□□ -0.89
CLTCL1-208ENST00000615606 UBXN2BQ14CS0 331 aa9.48□□□□□ -0.89
CLTCL1-208ENST00000615606 HLA-DQA1Q5Y7H0 255 aa9.48□□□□□ -0.89
CLTCL1-208ENST00000615606 CRTC3Q6UUV7 619 aa9.48□□□□□ -0.89
CLTCL1-208ENST00000615606 CYP20A1Q6UW02 462 aa9.48□□□□□ -0.89
CLTCL1-208ENST00000615606 ZNF567Q8N184 647 aa9.48□□□□□ -0.89
CLTCL1-208ENST00000615606 KLHL23Q8NBE8 558 aa9.48□□□□□ -0.89
CLTCL1-208ENST00000615606 PCDH19Q8TAB3 1148 aa9.48□□□□□ -0.89
CLTCL1-208ENST00000615606 RDH11Q8TC12 318 aa9.48□□□□□ -0.89
CLTCL1-208ENST00000615606 BPIFB1Q8TDL5 484 aa9.48□□□□□ -0.89
CLTCL1-208ENST00000615606 SLC22A17Q8WUG5 538 aa9.48□□□□□ -0.89
CLTCL1-208ENST00000615606 SELENOMQ8WWX9 145 aa9.48□□□□□ -0.89
CLTCL1-208ENST00000615606 PRCCQ92733 491 aaPredicted RBP9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms