RNA–Protein interactions for RNA: ENST00000613899.4

FAM228B-208, Transcript of family with sequence similarity 228 member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FAM228B, Length 1,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-208ENST00000613899 PEX5P50542 639 aa22.9■■□□□ 1.26
FAM228B-208ENST00000613899 ZNF235Q14590 738 aa22.9■■□□□ 1.26
FAM228B-208ENST00000613899 LBRQ14739 615 aaKnown RBP22.9■■□□□ 1.26
FAM228B-208ENST00000613899 AGERQ15109 404 aa22.9■■□□□ 1.26
FAM228B-208ENST00000613899 ZSCAN23Q3MJ62 389 aa22.9■■□□□ 1.26
FAM228B-208ENST00000613899 ALKBH5Q6P6C2 394 aaKnown RBP22.9■■□□□ 1.26
FAM228B-208ENST00000613899 ZSWIM9Q86XI8 627 aa22.9■■□□□ 1.26
FAM228B-208ENST00000613899 DCBLD1Q8N8Z6 715 aa22.9■■□□□ 1.26
FAM228B-208ENST00000613899 LMX1AQ8TE12 382 aa22.9■■□□□ 1.26
FAM228B-208ENST00000613899 ECHDC3Q96DC8 303 aa22.9■■□□□ 1.26
FAM228B-208ENST00000613899 IL12RB2Q99665 862 aa22.9■■□□□ 1.26
FAM228B-208ENST00000613899 SLC13A1Q9BZW2 595 aa22.9■■□□□ 1.26
FAM228B-208ENST00000613899 LHX6Q9UPM6 363 aa22.9■■□□□ 1.26
FAM228B-208ENST00000613899 COQ6Q9Y2Z9 468 aa22.9■■□□□ 1.26
FAM228B-208ENST00000613899 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP22.9■■□□□ 1.26
FAM228B-208ENST00000613899 ADAMTS20P59510 1910 aa22.89■■□□□ 1.25
FAM228B-208ENST00000613899 LY6G6EA0A0G2JKS1 128 aa22.89■■□□□ 1.25
FAM228B-208ENST00000613899 TMEM110-MUSTN1A8MSY1 372 aa22.89■■□□□ 1.25
FAM228B-208ENST00000613899 LIG3P49916 1009 aa22.89■■□□□ 1.25
FAM228B-208ENST00000613899 SCNN1BP51168 640 aa22.89■■□□□ 1.25
FAM228B-208ENST00000613899 POLR2LP62875 67 aaKnown RBP22.89■■□□□ 1.25
FAM228B-208ENST00000613899 SLC25A11Q02978 314 aaKnown RBP22.89■■□□□ 1.25
FAM228B-208ENST00000613899 WSCD2Q2TBF2 565 aa22.89■■□□□ 1.25
FAM228B-208ENST00000613899 RBFAQ8N0V3 343 aa22.89■■□□□ 1.25
FAM228B-208ENST00000613899 BBS5Q8N3I7 341 aa22.89■■□□□ 1.25
FAM228B-208ENST00000613899 SALL4Q9UJQ4 1053 aa22.89■■□□□ 1.25
FAM228B-208ENST00000613899 U3KQA8 63 aa22.89■■□□□ 1.25
FAM228B-208ENST00000613899 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP22.88■■□□□ 1.25
FAM228B-208ENST00000613899 CFAP69A5D8W1 941 aa22.88■■□□□ 1.25
FAM228B-208ENST00000613899 MYO1FO00160 1098 aa22.88■■□□□ 1.25
FAM228B-208ENST00000613899 LZTS3O60299 673 aaPredicted RBP22.88■■□□□ 1.25
FAM228B-208ENST00000613899 MT-CO3P00414 261 aa22.88■■□□□ 1.25
FAM228B-208ENST00000613899 AMPD1P23109 780 aa22.88■■□□□ 1.25
FAM228B-208ENST00000613899 HTR1BP28222 390 aa22.88■■□□□ 1.25
FAM228B-208ENST00000613899 BLKP51451 505 aa22.88■■□□□ 1.25
FAM228B-208ENST00000613899 PPARDQ03181 441 aa22.88■■□□□ 1.25
FAM228B-208ENST00000613899 SLC10A7Q0GE19 358 aa22.88■■□□□ 1.25
FAM228B-208ENST00000613899 RTP5Q14D33 572 aa22.88■■□□□ 1.25
FAM228B-208ENST00000613899 DEFB133Q30KQ1 61 aa22.88■■□□□ 1.25
FAM228B-208ENST00000613899 PRRT3Q5FWE3 981 aa22.88■■□□□ 1.25
FAM228B-208ENST00000613899 CCDC122Q5T0U0 273 aa22.88■■□□□ 1.25
FAM228B-208ENST00000613899 TP53INP2Q8IXH6 220 aa22.88■■□□□ 1.25
FAM228B-208ENST00000613899 ATPAF2Q8N5M1 289 aa22.88■■□□□ 1.25
FAM228B-208ENST00000613899 BTBD6Q96KE9 485 aa22.88■■□□□ 1.25
FAM228B-208ENST00000613899 LRRC61Q9BV99 259 aa22.88■■□□□ 1.25
FAM228B-208ENST00000613899 PCDH18Q9HCL0 1135 aa22.88■■□□□ 1.25
FAM228B-208ENST00000613899 SCUBE2Q9NQ36 999 aa22.88■■□□□ 1.25
FAM228B-208ENST00000613899 ETNK2Q9NVF9 386 aa22.88■■□□□ 1.25
FAM228B-208ENST00000613899 RCOR3Q9P2K3 495 aaPredicted RBP22.88■■□□□ 1.25
FAM228B-208ENST00000613899 RALYQ9UKM9 306 aaKnown RBP22.88■■□□□ 1.25
FAM228B-208ENST00000613899 AK5Q9Y6K8 562 aa22.88■■□□□ 1.25
FAM228B-208ENST00000613899 URB1O60287 2271 aaKnown RBP22.88■■□□□ 1.25
FAM228B-208ENST00000613899 ZFYVE26Q68DK2 2539 aa22.87■■□□□ 1.25
FAM228B-208ENST00000613899 TRAFD1O14545 582 aaPredicted RBP22.87■■□□□ 1.25
FAM228B-208ENST00000613899 MUSKO15146 869 aa22.87■■□□□ 1.25
FAM228B-208ENST00000613899 OPA1O60313 960 aa22.87■■□□□ 1.25
FAM228B-208ENST00000613899 PRKCGP05129 697 aa22.87■■□□□ 1.25
FAM228B-208ENST00000613899 ELFN1P0C7U0 828 aa22.87■■□□□ 1.25
FAM228B-208ENST00000613899 CASP14P31944 242 aa22.87■■□□□ 1.25
FAM228B-208ENST00000613899 KRT81Q14533 505 aa22.87■■□□□ 1.25
FAM228B-208ENST00000613899 HADHQ16836 314 aaKnown RBP22.87■■□□□ 1.25
FAM228B-208ENST00000613899 SKOR2Q2VWA4 1001 aaPredicted RBP22.87■■□□□ 1.25
FAM228B-208ENST00000613899 FAXCQ5TGI0 409 aa22.87■■□□□ 1.25
FAM228B-208ENST00000613899 TXNRD3NBQ6F5E7 133 aa22.87■■□□□ 1.25
FAM228B-208ENST00000613899 ATL2Q8NHH9 583 aa22.87■■□□□ 1.25
FAM228B-208ENST00000613899 IFI44Q8TCB0 444 aa22.87■■□□□ 1.25
FAM228B-208ENST00000613899 NSMCE1Q8WV22 266 aa22.87■■□□□ 1.25
FAM228B-208ENST00000613899 GLMNQ92990 594 aa22.87■■□□□ 1.25
FAM228B-208ENST00000613899 TCEAL2Q9H3H9 227 aaPredicted RBP22.87■■□□□ 1.25
FAM228B-208ENST00000613899 SHROOM3Q8TF72 1996 aa22.87■■□□□ 1.25
FAM228B-208ENST00000613899 LRP4O75096 1905 aa22.86■■□□□ 1.25
FAM228B-208ENST00000613899 A0A1W2PQ67 120 aa22.86■■□□□ 1.25
FAM228B-208ENST00000613899 LMO7DNF2Z398 122 aa22.86■■□□□ 1.25
FAM228B-208ENST00000613899 SOCS5O75159 536 aa22.86■■□□□ 1.25
FAM228B-208ENST00000613899 ANXA6P08133 673 aa22.86■■□□□ 1.25
FAM228B-208ENST00000613899 HNRNPH3P31942 346 aaKnown RBP22.86■■□□□ 1.25
FAM228B-208ENST00000613899 CDH6P55285 790 aa22.86■■□□□ 1.25
FAM228B-208ENST00000613899 RALGDSQ12967 914 aa22.86■■□□□ 1.25
FAM228B-208ENST00000613899 MTM1Q13496 603 aa22.86■■□□□ 1.25
FAM228B-208ENST00000613899 NFATC4Q14934 902 aa22.86■■□□□ 1.25
FAM228B-208ENST00000613899 DPPA4Q7L190 304 aa22.86■■□□□ 1.25
FAM228B-208ENST00000613899 FSTL5Q8N475 847 aaPredicted RBP22.86■■□□□ 1.25
FAM228B-208ENST00000613899 ZNF564Q8TBZ8 553 aaPredicted RBP22.86■■□□□ 1.25
FAM228B-208ENST00000613899 SPOCK2Q92563 424 aa22.86■■□□□ 1.25
FAM228B-208ENST00000613899 DEPDC7Q96QD5 511 aa22.86■■□□□ 1.25
FAM228B-208ENST00000613899 XPO4Q9C0E2 1151 aaKnown RBP22.86■■□□□ 1.25
FAM228B-208ENST00000613899 ABCG4Q9H172 646 aa22.86■■□□□ 1.25
FAM228B-208ENST00000613899 PNMA8BQ9ULN7 279 aaPredicted RBP22.86■■□□□ 1.25
FAM228B-208ENST00000613899 LAMA5O15230 3695 aa22.86■■□□□ 1.25
FAM228B-208ENST00000613899 MAFKO60675 156 aa22.85■■□□□ 1.25
FAM228B-208ENST00000613899 GCATO75600 419 aa22.85■■□□□ 1.25
FAM228B-208ENST00000613899 PCCBP05166 539 aa22.85■■□□□ 1.25
FAM228B-208ENST00000613899 MYF5P13349 255 aa22.85■■□□□ 1.25
FAM228B-208ENST00000613899 NFKBIAP25963 317 aa22.85■■□□□ 1.25
FAM228B-208ENST00000613899 SSR1P43307 286 aaKnown RBP22.85■■□□□ 1.25
FAM228B-208ENST00000613899 RPIAP49247 311 aa22.85■■□□□ 1.25
FAM228B-208ENST00000613899 TRIM14Q14142 442 aa22.85■■□□□ 1.25
FAM228B-208ENST00000613899 INPP5AQ14642 412 aa22.85■■□□□ 1.25
FAM228B-208ENST00000613899 NR0B2Q15466 257 aa22.85■■□□□ 1.25
FAM228B-208ENST00000613899 CDKN3Q16667 212 aa22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms