RNA–Protein interactions for RNA: ENST00000612404.4

SREK1-216, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best) BASIC

Gene SREK1, Length 2,128 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-216ENST00000612404 C9orf64Q5T6V5 341 aa17.65■□□□□ 0.42
SREK1-216ENST00000612404 FSTL4Q6MZW2 842 aa17.65■□□□□ 0.42
SREK1-216ENST00000612404 STK40Q8N2I9 435 aa17.65■□□□□ 0.42
SREK1-216ENST00000612404 FBF1Q8TES7 1133 aa17.65■□□□□ 0.42
SREK1-216ENST00000612404 VOPP1Q96AW1 172 aa17.65■□□□□ 0.42
SREK1-216ENST00000612404 ZNF669Q96BR6 464 aaPredicted RBP17.65■□□□□ 0.42
SREK1-216ENST00000612404 ZNF641Q96N77 438 aaPredicted RBP17.65■□□□□ 0.42
SREK1-216ENST00000612404 KLHL32Q96NJ5 620 aa17.65■□□□□ 0.42
SREK1-216ENST00000612404 PLAC1Q9HBJ0 212 aa17.65■□□□□ 0.42
SREK1-216ENST00000612404 PRKAG3Q9UGI9 489 aa17.65■□□□□ 0.42
SREK1-216ENST00000612404 TCAF1Q9Y4C2 921 aa17.65■□□□□ 0.42
SREK1-216ENST00000612404 STON1Q9Y6Q2 735 aa17.65■□□□□ 0.42
SREK1-216ENST00000612404 TCF20Q9UGU0 1960 aaKnown RBP17.65■□□□□ 0.42
SREK1-216ENST00000612404 FAM237BA0A1B0GVD1 139 aa17.65■□□□□ 0.42
SREK1-216ENST00000612404 HEATR9A2RTY3 570 aa17.65■□□□□ 0.42
SREK1-216ENST00000612404 ATP8B1O43520 1251 aa17.65■□□□□ 0.42
SREK1-216ENST00000612404 CTSLP07711 333 aa17.65■□□□□ 0.42
SREK1-216ENST00000612404 ABHD2P08910 425 aa17.65■□□□□ 0.42
SREK1-216ENST00000612404 NUDT17P0C025 328 aa17.65■□□□□ 0.42
SREK1-216ENST00000612404 HNRNPLP14866 589 aaKnown RBP eCLIP17.65■□□□□ 0.42
SREK1-216ENST00000612404 TSHRP16473 764 aa17.65■□□□□ 0.42
SREK1-216ENST00000612404 CTPS1P17812 591 aa17.65■□□□□ 0.42
SREK1-216ENST00000612404 KIR2DL1P43626 348 aaPredicted RBP17.65■□□□□ 0.42
SREK1-216ENST00000612404 CRYMQ14894 314 aa17.65■□□□□ 0.42
SREK1-216ENST00000612404 E2F5Q15329 346 aa17.65■□□□□ 0.42
SREK1-216ENST00000612404 PKN3Q6P5Z2 889 aa17.65■□□□□ 0.42
SREK1-216ENST00000612404 TPRG1Q6ZUI0 275 aa17.65■□□□□ 0.42
SREK1-216ENST00000612404 GSDMBQ8TAX9 411 aa17.65■□□□□ 0.42
SREK1-216ENST00000612404 PIH1D2Q8WWB5 315 aa17.65■□□□□ 0.42
SREK1-216ENST00000612404 ZNF778Q96MU6 729 aa17.65■□□□□ 0.42
SREK1-216ENST00000612404 KIFC1Q9BW19 673 aa17.65■□□□□ 0.42
SREK1-216ENST00000612404 SUN2Q9UH99 717 aa17.65■□□□□ 0.42
SREK1-216ENST00000612404 DUSP12Q9UNI6 340 aa17.65■□□□□ 0.42
SREK1-216ENST00000612404 TCRBV9S1A1TA0A576 114 aa17.64■□□□□ 0.41
SREK1-216ENST00000612404 CD72P21854 359 aa17.64■□□□□ 0.41
SREK1-216ENST00000612404 NMBRP28336 390 aa17.64■□□□□ 0.41
SREK1-216ENST00000612404 ABL2P42684 1182 aa17.64■□□□□ 0.41
SREK1-216ENST00000612404 GRIA4P48058 902 aa17.64■□□□□ 0.41
SREK1-216ENST00000612404 RPL26P61254 145 aaKnown RBP17.64■□□□□ 0.41
SREK1-216ENST00000612404 MSLNQ13421 630 aaPredicted RBP17.64■□□□□ 0.41
SREK1-216ENST00000612404 ELAVL3Q14576 367 aaKnown RBP17.64■□□□□ 0.41
SREK1-216ENST00000612404 POM121L1PQ3SYA9 428 aa17.64■□□□□ 0.41
SREK1-216ENST00000612404 ZSWIM9Q86XI8 627 aa17.64■□□□□ 0.41
SREK1-216ENST00000612404 PTCD2Q8WV60 388 aaKnown RBP17.64■□□□□ 0.41
SREK1-216ENST00000612404 OR8D1Q8WZ84 308 aa17.64■□□□□ 0.41
SREK1-216ENST00000612404 FAM3CQ92520 227 aa17.64■□□□□ 0.41
SREK1-216ENST00000612404 MFSD3Q96ES6 412 aa17.64■□□□□ 0.41
SREK1-216ENST00000612404 ACBD3Q9H3P7 528 aa17.64■□□□□ 0.41
SREK1-216ENST00000612404 PPANQ9NQ55 473 aaKnown RBP17.64■□□□□ 0.41
SREK1-216ENST00000612404 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.64■□□□□ 0.41
SREK1-216ENST00000612404 RPL26L1Q9UNX3 145 aaKnown RBP17.64■□□□□ 0.41
SREK1-216ENST00000612404 SPO11Q9Y5K1 396 aa17.64■□□□□ 0.41
SREK1-216ENST00000612404 NPC1O15118 1278 aa17.63■□□□□ 0.41
SREK1-216ENST00000612404 USP1O94782 785 aa17.63■□□□□ 0.41
SREK1-216ENST00000612404 SLC4A1P02730 911 aa17.63■□□□□ 0.41
SREK1-216ENST00000612404 GSTA2P09210 222 aa17.63■□□□□ 0.41
SREK1-216ENST00000612404 PTPRRQ15256 657 aa17.63■□□□□ 0.41
SREK1-216ENST00000612404 SMAD1Q15797 465 aaKnown RBP17.63■□□□□ 0.41
SREK1-216ENST00000612404 ANKRD20A4Q4UJ75 823 aa17.63■□□□□ 0.41
SREK1-216ENST00000612404 SPANXN3Q5MJ09 141 aa17.63■□□□□ 0.41
SREK1-216ENST00000612404 STEAP4Q687X5 459 aa17.63■□□□□ 0.41
SREK1-216ENST00000612404 TMEM135Q86UB9 458 aa17.63■□□□□ 0.41
SREK1-216ENST00000612404 BRSK1Q8TDC3 778 aa17.63■□□□□ 0.41
SREK1-216ENST00000612404 FCRL3Q96P31 734 aaPredicted RBP17.63■□□□□ 0.41
SREK1-216ENST00000612404 RANBP9Q96S59 729 aa17.63■□□□□ 0.41
SREK1-216ENST00000612404 CCDC77Q9BR77 488 aa17.63■□□□□ 0.41
SREK1-216ENST00000612404 OSBPL1AQ9BXW6 950 aa17.63■□□□□ 0.41
SREK1-216ENST00000612404 ARL5AQ9Y689 179 aa17.63■□□□□ 0.41
SREK1-216ENST00000612404 NFS1Q9Y697 457 aa17.63■□□□□ 0.41
SREK1-216ENST00000612404 SMIM23A6NLE4 172 aa17.63■□□□□ 0.41
SREK1-216ENST00000612404 PIAS1O75925 651 aa17.63■□□□□ 0.41
SREK1-216ENST00000612404 PRNPP04156 253 aa17.63■□□□□ 0.41
SREK1-216ENST00000612404 ALPIP09923 528 aa17.63■□□□□ 0.41
SREK1-216ENST00000612404 STX2P32856 288 aa17.63■□□□□ 0.41
SREK1-216ENST00000612404 EIF3BP55884 814 aaKnown RBP17.63■□□□□ 0.41
SREK1-216ENST00000612404 LRIG3Q6UXM1 1119 aa17.63■□□□□ 0.41
SREK1-216ENST00000612404 GLT6D1Q7Z4J2 308 aa17.63■□□□□ 0.41
SREK1-216ENST00000612404 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.63■□□□□ 0.41
SREK1-216ENST00000612404 ECHDC3Q96DC8 303 aa17.63■□□□□ 0.41
SREK1-216ENST00000612404 MSANTD3Q96H12 275 aa17.63■□□□□ 0.41
SREK1-216ENST00000612404 LRIG1Q96JA1 1093 aa17.63■□□□□ 0.41
SREK1-216ENST00000612404 PRSS16Q9NQE7 514 aa17.63■□□□□ 0.41
SREK1-216ENST00000612404 SLC2A6Q9UGQ3 507 aa17.63■□□□□ 0.41
SREK1-216ENST00000612404 RABGEF1Q9UJ41 708 aa17.63■□□□□ 0.41
SREK1-216ENST00000612404 CA14Q9ULX7 337 aa17.63■□□□□ 0.41
SREK1-216ENST00000612404 EXOC1LA0A1B0GW35 172 aa17.62■□□□□ 0.41
SREK1-216ENST00000612404 KPNA3O00505 521 aaPredicted RBP17.62■□□□□ 0.41
SREK1-216ENST00000612404 BUD23O43709 281 aaKnown RBP17.62■□□□□ 0.41
SREK1-216ENST00000612404 MLF2Q15773 248 aaPredicted RBP17.62■□□□□ 0.41
SREK1-216ENST00000612404 CEP85LQ5SZL2 805 aa17.62■□□□□ 0.41
SREK1-216ENST00000612404 SDE2Q6IQ49 451 aa17.62■□□□□ 0.41
SREK1-216ENST00000612404 TRMT10BQ6PF06 316 aaKnown RBP17.62■□□□□ 0.41
SREK1-216ENST00000612404 UNC5BQ8IZJ1 945 aa17.62■□□□□ 0.41
SREK1-216ENST00000612404 MRRFQ96E11 262 aaKnown RBP17.62■□□□□ 0.41
SREK1-216ENST00000612404 MRM3Q9HC36 420 aaKnown RBP17.62■□□□□ 0.41
SREK1-216ENST00000612404 IL1RAPL1Q9NZN1 696 aa17.62■□□□□ 0.41
SREK1-216ENST00000612404 PHTF1Q9UMS5 762 aa17.62■□□□□ 0.41
SREK1-216ENST00000612404 NDRG2Q9UN36 371 aaKnown RBP17.62■□□□□ 0.41
SREK1-216ENST00000612404 SORCS3Q9UPU3 1222 aa17.62■□□□□ 0.41
SREK1-216ENST00000612404 KCTD3Q9Y597 815 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms