RNA–Protein interactions for RNA: ENST00000611963.4

TARDBP-213, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-213ENST00000611963 TRIB3Q96RU7 358 aa8.16□□□□□ -1.1
TARDBP-213ENST00000611963 PAFAH2Q99487 392 aa8.16□□□□□ -1.1
TARDBP-213ENST00000611963 FAM83CQ9BQN1 747 aa8.16□□□□□ -1.1
TARDBP-213ENST00000611963 RPP25Q9BUL9 199 aaKnown RBP8.16□□□□□ -1.1
TARDBP-213ENST00000611963 SLC2A11Q9BYW1 496 aa8.16□□□□□ -1.1
TARDBP-213ENST00000611963 ROPN1BQ9BZX4 212 aaPredicted RBP8.16□□□□□ -1.1
TARDBP-213ENST00000611963 IL22Q9GZX6 179 aa8.16□□□□□ -1.1
TARDBP-213ENST00000611963 ECT2Q9H8V3 914 aa8.16□□□□□ -1.1
TARDBP-213ENST00000611963 ROPN1Q9HAT0 212 aaPredicted RBP8.16□□□□□ -1.1
TARDBP-213ENST00000611963 UGT1A7Q9HAW7 530 aa8.16□□□□□ -1.1
TARDBP-213ENST00000611963 UGT1A10Q9HAW8 530 aa8.16□□□□□ -1.1
TARDBP-213ENST00000611963 UGT1A8Q9HAW9 530 aa8.16□□□□□ -1.1
TARDBP-213ENST00000611963 CHRAC1Q9NRG0 131 aa8.16□□□□□ -1.1
TARDBP-213ENST00000611963 THG1LQ9NWX6 298 aaKnown RBP8.16□□□□□ -1.1
TARDBP-213ENST00000611963 VPS18Q9P253 973 aa8.16□□□□□ -1.1
TARDBP-213ENST00000611963 LIMD1Q9UGP4 676 aa8.16□□□□□ -1.1
TARDBP-213ENST00000611963 TBK1Q9UHD2 729 aa8.16□□□□□ -1.1
TARDBP-213ENST00000611963 EVLQ9UI08 416 aaPredicted RBP8.16□□□□□ -1.1
TARDBP-213ENST00000611963 FBXO10Q9UK96 956 aa8.16□□□□□ -1.1
TARDBP-213ENST00000611963 SOX13Q9UN79 622 aa8.16□□□□□ -1.1
TARDBP-213ENST00000611963 NOVA2Q9UNW9 492 aaKnown RBP8.16□□□□□ -1.1
TARDBP-213ENST00000611963 PIKFYVEQ9Y2I7 2098 aa8.16□□□□□ -1.1
TARDBP-213ENST00000611963 TCAF1Q9Y4C2 921 aa8.16□□□□□ -1.1
TARDBP-213ENST00000611963 RAI2Q9Y5P3 530 aa8.16□□□□□ -1.1
TARDBP-213ENST00000611963 RPS6KL1Q9Y6S9 549 aa8.16□□□□□ -1.1
TARDBP-213ENST00000611963 ZNF318Q5VUA4 2279 aa8.15□□□□□ -1.1
TARDBP-213ENST00000611963 ZCWPW2A0A1B0GU75 182 aa8.15□□□□□ -1.1
TARDBP-213ENST00000611963 FAM237BA0A1B0GVD1 139 aa8.15□□□□□ -1.1
TARDBP-213ENST00000611963 LOC285095A0A1B0GVY8 99 aa8.15□□□□□ -1.1
TARDBP-213ENST00000611963 FAM159BA6NKW6 160 aa8.15□□□□□ -1.1
TARDBP-213ENST00000611963 BNIP3LO60238 219 aa8.15□□□□□ -1.1
TARDBP-213ENST00000611963 ZNF821O75541 412 aaPredicted RBP8.15□□□□□ -1.1
TARDBP-213ENST00000611963 FAM155BO75949 473 aa8.15□□□□□ -1.1
TARDBP-213ENST00000611963 USP1O94782 785 aa8.15□□□□□ -1.1
TARDBP-213ENST00000611963 PIGNO95427 931 aa8.15□□□□□ -1.1
TARDBP-213ENST00000611963 NDST3O95803 873 aa8.15□□□□□ -1.1
TARDBP-213ENST00000611963 IGSF6O95976 241 aa8.15□□□□□ -1.1
TARDBP-213ENST00000611963 PDGFBP01127 241 aaPredicted RBP8.15□□□□□ -1.1
TARDBP-213ENST00000611963 PRLP01236 227 aa8.15□□□□□ -1.1
TARDBP-213ENST00000611963 FGF1P05230 155 aa8.15□□□□□ -1.1
TARDBP-213ENST00000611963 PDHA1P08559 390 aa8.15□□□□□ -1.1
TARDBP-213ENST00000611963 F7P08709 466 aaPredicted RBP8.15□□□□□ -1.1
TARDBP-213ENST00000611963 GSTA2P09210 222 aa8.15□□□□□ -1.1
TARDBP-213ENST00000611963 ERVK-10P10266 1014 aa8.15□□□□□ -1.1
TARDBP-213ENST00000611963 POLR2EP19388 210 aaKnown RBP8.15□□□□□ -1.1
TARDBP-213ENST00000611963 HLA-DPA1P20036 260 aa8.15□□□□□ -1.1
TARDBP-213ENST00000611963 PRKCHP24723 683 aa8.15□□□□□ -1.1
TARDBP-213ENST00000611963 GDI1P31150 447 aa8.15□□□□□ -1.1
TARDBP-213ENST00000611963 MSH2P43246 934 aa8.15□□□□□ -1.1
TARDBP-213ENST00000611963 MAGOHP61326 146 aaKnown RBP8.15□□□□□ -1.1
TARDBP-213ENST00000611963 SLC20A2Q08357 652 aa8.15□□□□□ -1.1
TARDBP-213ENST00000611963 SIGLEC14Q08ET2 396 aa8.15□□□□□ -1.1
TARDBP-213ENST00000611963 FCHO2Q0JRZ9 810 aa8.15□□□□□ -1.1
TARDBP-213ENST00000611963 MSLNQ13421 630 aaPredicted RBP8.15□□□□□ -1.1
TARDBP-213ENST00000611963 DMC1Q14565 340 aa8.15□□□□□ -1.1
TARDBP-213ENST00000611963 DLG2Q15700 870 aa8.15□□□□□ -1.1
TARDBP-213ENST00000611963 SLC14A2Q15849 920 aa8.15□□□□□ -1.1
TARDBP-213ENST00000611963 KLHL38Q2WGJ6 581 aa8.15□□□□□ -1.1
TARDBP-213ENST00000611963 PCID2Q5JVF3 399 aa8.15□□□□□ -1.1
TARDBP-213ENST00000611963 SPANXN3Q5MJ09 141 aa8.15□□□□□ -1.1
TARDBP-213ENST00000611963 GRAMD4Q6IC98 578 aa8.15□□□□□ -1.1
TARDBP-213ENST00000611963 ESRP1Q6NXG1 681 aaKnown RBP8.15□□□□□ -1.1
TARDBP-213ENST00000611963 PKN3Q6P5Z2 889 aa8.15□□□□□ -1.1
TARDBP-213ENST00000611963 Q6ZVU0 165 aa8.15□□□□□ -1.1
TARDBP-213ENST00000611963 KIAA0907Q7Z7F0 614 aaPredicted RBP8.15□□□□□ -1.1
TARDBP-213ENST00000611963 RASSF3Q86WH2 238 aa8.15□□□□□ -1.1
TARDBP-213ENST00000611963 CTAGE3PQ8IX95 158 aa8.15□□□□□ -1.1
TARDBP-213ENST00000611963 AHI1Q8N157 1196 aa8.15□□□□□ -1.1
TARDBP-213ENST00000611963 RYBPQ8N488 228 aaPredicted RBP8.15□□□□□ -1.1
TARDBP-213ENST00000611963 CPA6Q8N4T0 437 aa8.15□□□□□ -1.1
TARDBP-213ENST00000611963 PPM1NQ8N819 430 aa8.15□□□□□ -1.1
TARDBP-213ENST00000611963 ZNF557Q8N988 423 aaPredicted RBP8.15□□□□□ -1.1
TARDBP-213ENST00000611963 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.15□□□□□ -1.1
TARDBP-213ENST00000611963 PPHLN1Q8NEY8 458 aaKnown RBP8.15□□□□□ -1.1
TARDBP-213ENST00000611963 LPCAT1Q8NF37 534 aa8.15□□□□□ -1.1
TARDBP-213ENST00000611963 PDCD6IPQ8WUM4 868 aaKnown RBP8.15□□□□□ -1.1
TARDBP-213ENST00000611963 DCAKDQ8WVC6 231 aa8.15□□□□□ -1.1
TARDBP-213ENST00000611963 SLC44A1Q8WWI5 657 aa8.15□□□□□ -1.1
TARDBP-213ENST00000611963 NXPE3Q969Y0 559 aa8.15□□□□□ -1.1
TARDBP-213ENST00000611963 TTC17Q96AE7 1141 aa8.15□□□□□ -1.1
TARDBP-213ENST00000611963 ELSPBP1Q96BH3 223 aa8.15□□□□□ -1.1
TARDBP-213ENST00000611963 ZNF778Q96MU6 729 aa8.15□□□□□ -1.1
TARDBP-213ENST00000611963 CYTH2Q99418 400 aa8.15□□□□□ -1.1
TARDBP-213ENST00000611963 NAT9Q9BTE0 207 aa8.15□□□□□ -1.1
TARDBP-213ENST00000611963 KIFC1Q9BW19 673 aa8.15□□□□□ -1.1
TARDBP-213ENST00000611963 TDRD1Q9BXT4 1180 aaKnown RBP8.15□□□□□ -1.1
TARDBP-213ENST00000611963 CIPCQ9C0C6 399 aa8.15□□□□□ -1.1
TARDBP-213ENST00000611963 ARNT2Q9HBZ2 717 aa8.15□□□□□ -1.1
TARDBP-213ENST00000611963 PPANQ9NQ55 473 aaKnown RBP8.15□□□□□ -1.1
TARDBP-213ENST00000611963 EURLQ9NYK6 297 aa8.15□□□□□ -1.1
TARDBP-213ENST00000611963 PSMC3IPQ9P2W1 217 aaPredicted RBP8.15□□□□□ -1.1
TARDBP-213ENST00000611963 SLC2A6Q9UGQ3 507 aa8.15□□□□□ -1.1
TARDBP-213ENST00000611963 LGALS13Q9UHV8 139 aa8.15□□□□□ -1.1
TARDBP-213ENST00000611963 SLCO3A1Q9UIG8 710 aa8.15□□□□□ -1.1
TARDBP-213ENST00000611963 SORCS3Q9UPU3 1222 aa8.15□□□□□ -1.1
TARDBP-213ENST00000611963 ERVW-1Q9UQF0 538 aa8.15□□□□□ -1.1
TARDBP-213ENST00000611963 HS3ST2Q9Y278 367 aa8.15□□□□□ -1.1
TARDBP-213ENST00000611963 KCTD3Q9Y597 815 aa8.15□□□□□ -1.1
TARDBP-213ENST00000611963 PCDHGC4Q9Y5F7 938 aa8.15□□□□□ -1.1
TARDBP-213ENST00000611963 ANKRD12Q6UB98 2062 aa8.15□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms