RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 STX16-NPEPL1H3BU86 382 aa8.73□□□□□ -1.01
LIG4-204ENST00000611712 CCNG1P51959 295 aa8.73□□□□□ -1.01
LIG4-204ENST00000611712 FOXD4Q12950 439 aaPredicted RBP8.73□□□□□ -1.01
LIG4-204ENST00000611712 GRIK3Q13003 919 aa8.73□□□□□ -1.01
LIG4-204ENST00000611712 GALNT3Q14435 633 aa8.73□□□□□ -1.01
LIG4-204ENST00000611712 NR6A1Q15406 480 aa8.73□□□□□ -1.01
LIG4-204ENST00000611712 RNF180Q86T96 592 aa8.73□□□□□ -1.01
LIG4-204ENST00000611712 FNDC5Q8NAU1 212 aa8.73□□□□□ -1.01
LIG4-204ENST00000611712 EXOC2Q96KP1 924 aa8.73□□□□□ -1.01
LIG4-204ENST00000611712 TBATAQ96M53 351 aa8.73□□□□□ -1.01
LIG4-204ENST00000611712 ASB2Q96Q27 587 aa8.73□□□□□ -1.01
LIG4-204ENST00000611712 VPS45Q9NRW7 570 aa8.73□□□□□ -1.01
LIG4-204ENST00000611712 OLA1Q9NTK5 396 aaKnown RBP8.73□□□□□ -1.01
LIG4-204ENST00000611712 SLC2A6Q9UGQ3 507 aa8.73□□□□□ -1.01
LIG4-204ENST00000611712 SLC27A5Q9Y2P5 690 aa8.73□□□□□ -1.01
LIG4-204ENST00000611712 MTF2Q9Y483 593 aaPredicted RBP8.73□□□□□ -1.01
LIG4-204ENST00000611712 PCDHB7Q9Y5E2 793 aa8.73□□□□□ -1.01
LIG4-204ENST00000611712 DCLK1O15075 740 aa8.73□□□□□ -1.01
LIG4-204ENST00000611712 SYNCRIPO60506 623 aaKnown RBP8.73□□□□□ -1.01
LIG4-204ENST00000611712 ALDH1A2O94788 518 aa8.73□□□□□ -1.01
LIG4-204ENST00000611712 ADSLP30566 484 aaPredicted RBP8.73□□□□□ -1.01
LIG4-204ENST00000611712 ARHGDIAP52565 204 aa8.73□□□□□ -1.01
LIG4-204ENST00000611712 CCL14Q16627 93 aa8.73□□□□□ -1.01
LIG4-204ENST00000611712 SLC5A9Q2M3M2 681 aa8.73□□□□□ -1.01
LIG4-204ENST00000611712 OTUD3Q5T2D3 398 aaPredicted RBP8.73□□□□□ -1.01
LIG4-204ENST00000611712 C6orf52Q5T4I8 152 aa8.73□□□□□ -1.01
LIG4-204ENST00000611712 PRMT9Q6P2P2 845 aa8.73□□□□□ -1.01
LIG4-204ENST00000611712 C16orf87Q6PH81 154 aa8.73□□□□□ -1.01
LIG4-204ENST00000611712 RBM44Q6ZP01 1051 aaKnown RBP8.73□□□□□ -1.01
LIG4-204ENST00000611712 KIAA0408Q6ZU52 694 aa8.73□□□□□ -1.01
LIG4-204ENST00000611712 LPCAT2Q7L5N7 544 aa8.73□□□□□ -1.01
LIG4-204ENST00000611712 ANKLE1Q8NAG6 615 aa8.73□□□□□ -1.01
LIG4-204ENST00000611712 TMEM40Q8WWA1 233 aa8.73□□□□□ -1.01
LIG4-204ENST00000611712 LPGAT1Q92604 370 aa8.73□□□□□ -1.01
LIG4-204ENST00000611712 ZNF778Q96MU6 729 aa8.73□□□□□ -1.01
LIG4-204ENST00000611712 TRIM54Q9BYV2 358 aa8.73□□□□□ -1.01
LIG4-204ENST00000611712 SLC25A51Q9H1U9 297 aa8.73□□□□□ -1.01
LIG4-204ENST00000611712 CXCL16Q9H2A7 254 aa8.73□□□□□ -1.01
LIG4-204ENST00000611712 EGFL7Q9UHF1 273 aa8.73□□□□□ -1.01
LIG4-204ENST00000611712 MATN2O00339 956 aa8.73□□□□□ -1.01
LIG4-204ENST00000611712 AZIN1O14977 448 aa8.73□□□□□ -1.01
LIG4-204ENST00000611712 CD3EAPO15446 510 aaKnown RBP8.73□□□□□ -1.01
LIG4-204ENST00000611712 IRAK2O43187 625 aa8.73□□□□□ -1.01
LIG4-204ENST00000611712 CCNT2O60583 730 aaKnown RBP8.73□□□□□ -1.01
LIG4-204ENST00000611712 GPR32O75388 356 aa8.73□□□□□ -1.01
LIG4-204ENST00000611712 KATNA1O75449 491 aa8.73□□□□□ -1.01
LIG4-204ENST00000611712 ALDH2P05091 517 aa8.73□□□□□ -1.01
LIG4-204ENST00000611712 LINGO3P0C6S8 592 aa8.73□□□□□ -1.01
LIG4-204ENST00000611712 ITGB6P18564 788 aa8.73□□□□□ -1.01
LIG4-204ENST00000611712 MAP4P27816 1152 aaKnown RBP8.73□□□□□ -1.01
LIG4-204ENST00000611712 POLD2P49005 469 aa8.73□□□□□ -1.01
LIG4-204ENST00000611712 CXCR3P49682 368 aa8.73□□□□□ -1.01
LIG4-204ENST00000611712 CTC1Q2NKJ3 1217 aa8.73□□□□□ -1.01
LIG4-204ENST00000611712 ATP6AP1LQ52LC2 224 aa8.73□□□□□ -1.01
LIG4-204ENST00000611712 AARS2Q5JTZ9 985 aaKnown RBP8.73□□□□□ -1.01
LIG4-204ENST00000611712 UGT3A1Q6NUS8 523 aa8.73□□□□□ -1.01
LIG4-204ENST00000611712 ANGPTL8Q6UXH0 198 aa8.73□□□□□ -1.01
LIG4-204ENST00000611712 TMEM135Q86UB9 458 aa8.73□□□□□ -1.01
LIG4-204ENST00000611712 RTL3Q8N8U3 475 aaKnown RBP8.73□□□□□ -1.01
LIG4-204ENST00000611712 ATAD1Q8NBU5 361 aa8.73□□□□□ -1.01
LIG4-204ENST00000611712 ARRDC4Q8NCT1 418 aa8.73□□□□□ -1.01
LIG4-204ENST00000611712 DNAJB14Q8TBM8 379 aa8.73□□□□□ -1.01
LIG4-204ENST00000611712 HGH1Q9BTY7 390 aa8.73□□□□□ -1.01
LIG4-204ENST00000611712 TRMOQ9BU70 441 aa8.73□□□□□ -1.01
LIG4-204ENST00000611712 ADGRE3Q9BY15 652 aa8.73□□□□□ -1.01
LIG4-204ENST00000611712 C20orf27Q9GZN8 174 aa8.73□□□□□ -1.01
LIG4-204ENST00000611712 WWOXQ9NZC7 414 aa8.73□□□□□ -1.01
LIG4-204ENST00000611712 UBA2Q9UBT2 640 aaPredicted RBP8.73□□□□□ -1.01
LIG4-204ENST00000611712 SEPT3Q9UH03 358 aa8.73□□□□□ -1.01
LIG4-204ENST00000611712 COMMD3-BMI1R4GMX3 469 aa8.73□□□□□ -1.01
LIG4-204ENST00000611712 SF3B1O75533 1304 aaKnown RBP eCLIP8.73□□□□□ -1.01
LIG4-204ENST00000611712 KANSL1LA0AUZ9 987 aa8.72□□□□□ -1.01
LIG4-204ENST00000611712 CLOCKO15516 846 aa8.72□□□□□ -1.01
LIG4-204ENST00000611712 HLA-DQB2P05538 268 aa8.72□□□□□ -1.01
LIG4-204ENST00000611712 LINC00032P0C843 101 aa8.72□□□□□ -1.01
LIG4-204ENST00000611712 DLG1Q12959 904 aa8.72□□□□□ -1.01
LIG4-204ENST00000611712 DPYSQ14117 519 aa8.72□□□□□ -1.01
LIG4-204ENST00000611712 PTPRNQ16849 979 aa8.72□□□□□ -1.01
LIG4-204ENST00000611712 NOMO2Q5JPE7 1267 aa8.72□□□□□ -1.01
LIG4-204ENST00000611712 TSTD2Q5T7W7 516 aa8.72□□□□□ -1.01
LIG4-204ENST00000611712 ARHGAP36Q6ZRI8 547 aa8.72□□□□□ -1.01
LIG4-204ENST00000611712 PCSK9Q8NBP7 692 aaKnown RBP8.72□□□□□ -1.01
LIG4-204ENST00000611712 TSPAN14Q8NG11 270 aa8.72□□□□□ -1.01
LIG4-204ENST00000611712 METTL6Q8TCB7 284 aa8.72□□□□□ -1.01
LIG4-204ENST00000611712 ARNTL2Q8WYA1 636 aa8.72□□□□□ -1.01
LIG4-204ENST00000611712 BTBD9Q96Q07 612 aa8.72□□□□□ -1.01
LIG4-204ENST00000611712 CRLS1Q9UJA2 301 aa8.72□□□□□ -1.01
LIG4-204ENST00000611712 MANSC4A6NHS7 340 aaPredicted RBP8.72□□□□□ -1.01
LIG4-204ENST00000611712 CCDC154A6NI56 674 aa8.72□□□□□ -1.01
LIG4-204ENST00000611712 C9JVG2 144 aa8.72□□□□□ -1.01
LIG4-204ENST00000611712 TRIM16O95361 564 aa8.72□□□□□ -1.01
LIG4-204ENST00000611712 CHRNB3Q05901 458 aa8.72□□□□□ -1.01
LIG4-204ENST00000611712 PKDCCQ504Y2 493 aa8.72□□□□□ -1.01
LIG4-204ENST00000611712 SFT2D3Q587I9 215 aa8.72□□□□□ -1.01
LIG4-204ENST00000611712 KIAA0930Q6ICG6 404 aaPredicted RBP8.72□□□□□ -1.01
LIG4-204ENST00000611712 GPRIN1Q7Z2K8 1008 aa8.72□□□□□ -1.01
LIG4-204ENST00000611712 NPWQ8N729 165 aa8.72□□□□□ -1.01
LIG4-204ENST00000611712 KCNN1Q92952 543 aa8.72□□□□□ -1.01
LIG4-204ENST00000611712 UROC1Q96N76 676 aa8.72□□□□□ -1.01
LIG4-204ENST00000611712 SLC2A13Q96QE2 648 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms