RNA–Protein interactions for RNA: ENST00000610623.4

TP53-220, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-220ENST00000610623 PDGFRAP16234 1089 aa12.01□□□□□ -0.49
TP53-220ENST00000610623 MGAT1P26572 445 aa12.01□□□□□ -0.49
TP53-220ENST00000610623 SQLEQ14534 574 aa12.01□□□□□ -0.49
TP53-220ENST00000610623 SNX17Q15036 470 aa12.01□□□□□ -0.49
TP53-220ENST00000610623 LY6KQ17RY6 165 aa12.01□□□□□ -0.49
TP53-220ENST00000610623 FAM102AQ5T9C2 384 aaPredicted RBP12.01□□□□□ -0.49
TP53-220ENST00000610623 SH3PXD2AQ5TCZ1 1133 aa12.01□□□□□ -0.49
TP53-220ENST00000610623 HEATR6Q6AI08 1181 aaKnown RBP12.01□□□□□ -0.49
TP53-220ENST00000610623 GTF2IRD2BQ6EKJ0 949 aa12.01□□□□□ -0.49
TP53-220ENST00000610623 C8orf82Q6P1X6 216 aaPredicted RBP12.01□□□□□ -0.49
TP53-220ENST00000610623 USP51Q70EK9 711 aa12.01□□□□□ -0.49
TP53-220ENST00000610623 GTF2IRD2Q86UP8 949 aa12.01□□□□□ -0.49
TP53-220ENST00000610623 ZBTB46Q86UZ6 589 aa12.01□□□□□ -0.49
TP53-220ENST00000610623 ZBTB8OSQ8IWT0 167 aa12.01□□□□□ -0.49
TP53-220ENST00000610623 SFRP1Q8N474 314 aa12.01□□□□□ -0.49
TP53-220ENST00000610623 SNX19Q92543 992 aa12.01□□□□□ -0.49
TP53-220ENST00000610623 VMP1Q96GC9 406 aa12.01□□□□□ -0.49
TP53-220ENST00000610623 FBXL20Q96IG2 436 aa12.01□□□□□ -0.49
TP53-220ENST00000610623 ZBTB45Q96K62 511 aaPredicted RBP12.01□□□□□ -0.49
TP53-220ENST00000610623 QKIQ96PU8 341 aaKnown RBP eCLIP12.01□□□□□ -0.49
TP53-220ENST00000610623 HERC2P3Q9BVR0 1158 aa12.01□□□□□ -0.49
TP53-220ENST00000610623 MRPL4Q9BYD3 311 aaKnown RBP12.01□□□□□ -0.49
TP53-220ENST00000610623 SEZ6LQ9BYH1 1024 aa12.01□□□□□ -0.49
TP53-220ENST00000610623 SIAEQ9HAT2 523 aa12.01□□□□□ -0.49
TP53-220ENST00000610623 AKIP1Q9NQ31 210 aa12.01□□□□□ -0.49
TP53-220ENST00000610623 SMPD3Q9NY59 655 aaPredicted RBP12.01□□□□□ -0.49
TP53-220ENST00000610623 IFT80Q9P2H3 777 aaPredicted RBP12.01□□□□□ -0.49
TP53-220ENST00000610623 DKK3Q9UBP4 350 aa12.01□□□□□ -0.49
TP53-220ENST00000610623 POU2F3Q9UKI9 436 aa12.01□□□□□ -0.49
TP53-220ENST00000610623 ANKRD6Q9Y2G4 727 aa12.01□□□□□ -0.49
TP53-220ENST00000610623 RGS13O14921 159 aa12□□□□□ -0.49
TP53-220ENST00000610623 PHGDHO43175 533 aaKnown RBP12□□□□□ -0.49
TP53-220ENST00000610623 MSI1O43347 362 aaKnown RBP12□□□□□ -0.49
TP53-220ENST00000610623 SRP72O76094 671 aaKnown RBP12□□□□□ -0.49
TP53-220ENST00000610623 MAP3K6O95382 1288 aa12□□□□□ -0.49
TP53-220ENST00000610623 FCGR1AP12314 374 aa12□□□□□ -0.49
TP53-220ENST00000610623 TCEA1P23193 301 aaKnown RBP12□□□□□ -0.49
TP53-220ENST00000610623 ETFBP38117 255 aa12□□□□□ -0.49
TP53-220ENST00000610623 HADHAP40939 763 aa12□□□□□ -0.49
TP53-220ENST00000610623 NAGLUP54802 743 aa12□□□□□ -0.49
TP53-220ENST00000610623 SESN2P58004 480 aaPredicted RBP12□□□□□ -0.49
TP53-220ENST00000610623 TIGD2Q4W5G0 525 aa12□□□□□ -0.49
TP53-220ENST00000610623 LDLRAD1Q5T700 205 aa12□□□□□ -0.49
TP53-220ENST00000610623 BROXQ5VW32 411 aa12□□□□□ -0.49
TP53-220ENST00000610623 KCNT2Q6UVM3 1135 aa12□□□□□ -0.49
TP53-220ENST00000610623 TFAP2DQ7Z6R9 452 aa12□□□□□ -0.49
TP53-220ENST00000610623 STRA8Q7Z7C7 330 aa12□□□□□ -0.49
TP53-220ENST00000610623 BRSK2Q8IWQ3 736 aa12□□□□□ -0.49
TP53-220ENST00000610623 PARP8Q8N3A8 854 aa12□□□□□ -0.49
TP53-220ENST00000610623 SERBP1Q8NC51 408 aaKnown RBP eCLIP12□□□□□ -0.49
TP53-220ENST00000610623 RXFP2Q8WXD0 754 aa12□□□□□ -0.49
TP53-220ENST00000610623 TARS2Q9BW92 718 aaKnown RBP12□□□□□ -0.49
TP53-220ENST00000610623 DHX35Q9H5Z1 703 aaKnown RBP12□□□□□ -0.49
TP53-220ENST00000610623 FANCEQ9HB96 536 aa12□□□□□ -0.49
TP53-220ENST00000610623 TXNRD2Q9NNW7 524 aa12□□□□□ -0.49
TP53-220ENST00000610623 ST14Q9Y5Y6 855 aa12□□□□□ -0.49
TP53-220ENST00000610623 DHRS12A0PJE2 317 aa12□□□□□ -0.49
TP53-220ENST00000610623 ANKRD34BA5PLL1 514 aa12□□□□□ -0.49
TP53-220ENST00000610623 ASB14A6NK59 587 aa12□□□□□ -0.49
TP53-220ENST00000610623 SDHDO14521 159 aa12□□□□□ -0.49
TP53-220ENST00000610623 TIMM44O43615 452 aa12□□□□□ -0.49
TP53-220ENST00000610623 KRT75O95678 551 aa12□□□□□ -0.49
TP53-220ENST00000610623 NTRK1P04629 796 aa12□□□□□ -0.49
TP53-220ENST00000610623 JUNP05412 331 aaKnown RBP12□□□□□ -0.49
TP53-220ENST00000610623 SNRPB2P08579 225 aaKnown RBP12□□□□□ -0.49
TP53-220ENST00000610623 PSMA4P25789 261 aaKnown RBP12□□□□□ -0.49
TP53-220ENST00000610623 RCVRNP35243 200 aa12□□□□□ -0.49
TP53-220ENST00000610623 ASPAP45381 313 aa12□□□□□ -0.49
TP53-220ENST00000610623 IRF9Q00978 393 aa12□□□□□ -0.49
TP53-220ENST00000610623 BFSP2Q13515 415 aa12□□□□□ -0.49
TP53-220ENST00000610623 MRPL58Q14197 206 aaKnown RBP12□□□□□ -0.49
TP53-220ENST00000610623 FRG1Q14331 258 aaKnown RBP12□□□□□ -0.49
TP53-220ENST00000610623 SURF1Q15526 300 aa12□□□□□ -0.49
TP53-220ENST00000610623 CYBRD1Q53TN4 286 aa12□□□□□ -0.49
TP53-220ENST00000610623 PERM1Q5SV97 790 aa12□□□□□ -0.49
TP53-220ENST00000610623 LSMEM2Q8N112 164 aa12□□□□□ -0.49
TP53-220ENST00000610623 KDM1BQ8NB78 822 aa12□□□□□ -0.49
TP53-220ENST00000610623 LEMD2Q8NC56 503 aa12□□□□□ -0.49
TP53-220ENST00000610623 TSNARE1Q96NA8 513 aa12□□□□□ -0.49
TP53-220ENST00000610623 CSF3RQ99062 836 aa12□□□□□ -0.49
TP53-220ENST00000610623 SLC25A23Q9BV35 468 aa12□□□□□ -0.49
TP53-220ENST00000610623 A0A0A0MRY4 1105 aa11.99□□□□□ -0.49
TP53-220ENST00000610623 IGKV6-21A0A0C4DH24 114 aa11.99□□□□□ -0.49
TP53-220ENST00000610623 H0YAE9 185 aa11.99□□□□□ -0.49
TP53-220ENST00000610623 MDM4O15151 490 aa11.99□□□□□ -0.49
TP53-220ENST00000610623 ACOX3O15254 700 aa11.99□□□□□ -0.49
TP53-220ENST00000610623 DDHD2O94830 711 aa11.99□□□□□ -0.49
TP53-220ENST00000610623 KCNH1O95259 989 aa11.99□□□□□ -0.49
TP53-220ENST00000610623 ARIH2O95376 493 aa11.99□□□□□ -0.49
TP53-220ENST00000610623 CLIC3O95833 236 aa11.99□□□□□ -0.49
TP53-220ENST00000610623 PGK2P07205 417 aa11.99□□□□□ -0.49
TP53-220ENST00000610623 POLR2IP36954 125 aaKnown RBP11.99□□□□□ -0.49
TP53-220ENST00000610623 TPTEP56180 551 aa11.99□□□□□ -0.49
TP53-220ENST00000610623 TRIM32Q13049 653 aa11.99□□□□□ -0.49
TP53-220ENST00000610623 FASTKQ14296 549 aaKnown RBP11.99□□□□□ -0.49
TP53-220ENST00000610623 CBX2Q14781 532 aaPredicted RBP11.99□□□□□ -0.49
TP53-220ENST00000610623 MAPRE1Q15691 268 aaKnown RBP11.99□□□□□ -0.49
TP53-220ENST00000610623 DUOXA2Q1HG44 320 aa11.99□□□□□ -0.49
TP53-220ENST00000610623 C15orf59Q2T9L4 293 aaPredicted RBP11.99□□□□□ -0.49
TP53-220ENST00000610623 ZNF699Q32M78 642 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms