RNA–Protein interactions for RNA: ENST00000610556.4

SYNPO2-206, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-206ENST00000610556 CCDC154A6NI56 674 aa6.9□□□□□ -1.3
SYNPO2-206ENST00000610556 TTC36A6NLP5 189 aa6.9□□□□□ -1.3
SYNPO2-206ENST00000610556 C9IYK1 514 aa6.9□□□□□ -1.3
SYNPO2-206ENST00000610556 E7ENX8 843 aa6.9□□□□□ -1.3
SYNPO2-206ENST00000610556 H0Y626 953 aa6.9□□□□□ -1.3
SYNPO2-206ENST00000610556 GPR182O15218 404 aa6.9□□□□□ -1.3
SYNPO2-206ENST00000610556 VPS26AO75436 327 aa6.9□□□□□ -1.3
SYNPO2-206ENST00000610556 CELF2O95319 508 aaKnown RBP6.9□□□□□ -1.3
SYNPO2-206ENST00000610556 TRIM16O95361 564 aa6.9□□□□□ -1.3
SYNPO2-206ENST00000610556 LBPP18428 481 aa6.9□□□□□ -1.3
SYNPO2-206ENST00000610556 GJA9P57773 515 aa6.9□□□□□ -1.3
SYNPO2-206ENST00000610556 TRAF2Q12933 501 aa6.9□□□□□ -1.3
SYNPO2-206ENST00000610556 FSCN1Q16658 493 aaKnown RBP6.9□□□□□ -1.3
SYNPO2-206ENST00000610556 TIGD2Q4W5G0 525 aa6.9□□□□□ -1.3
SYNPO2-206ENST00000610556 HECTD2Q5U5R9 776 aa6.9□□□□□ -1.3
SYNPO2-206ENST00000610556 GPR107Q5VW38 600 aa6.9□□□□□ -1.3
SYNPO2-206ENST00000610556 FAM126BQ8IXS8 530 aa6.9□□□□□ -1.3
SYNPO2-206ENST00000610556 OFCC1Q8IZS5 231 aa6.9□□□□□ -1.3
SYNPO2-206ENST00000610556 CBR4Q8N4T8 237 aa6.9□□□□□ -1.3
SYNPO2-206ENST00000610556 CDYL2Q8N8U2 506 aa6.9□□□□□ -1.3
SYNPO2-206ENST00000610556 ZNF555Q8NEP9 628 aa6.9□□□□□ -1.3
SYNPO2-206ENST00000610556 METTL6Q8TCB7 284 aa6.9□□□□□ -1.3
SYNPO2-206ENST00000610556 CAMKK2Q96RR4 588 aa6.9□□□□□ -1.3
SYNPO2-206ENST00000610556 RUBCNLQ9H714 662 aa6.9□□□□□ -1.3
SYNPO2-206ENST00000610556 SYTL2Q9HCH5 934 aa6.9□□□□□ -1.3
SYNPO2-206ENST00000610556 FBRSL1Q9HCM7 1045 aaKnown RBP6.9□□□□□ -1.3
SYNPO2-206ENST00000610556 BPIFA1Q9NP55 256 aa6.9□□□□□ -1.3
SYNPO2-206ENST00000610556 FAM105AQ9NUU6 356 aa6.9□□□□□ -1.3
SYNPO2-206ENST00000610556 DNAJB4Q9UDY4 337 aa6.9□□□□□ -1.3
SYNPO2-206ENST00000610556 GIMAP2Q9UG22 337 aa6.9□□□□□ -1.3
SYNPO2-206ENST00000610556 MTF2Q9Y483 593 aaPredicted RBP6.9□□□□□ -1.3
SYNPO2-206ENST00000610556 A0A0G2JLL6 359 aaPredicted RBP6.9□□□□□ -1.3
SYNPO2-206ENST00000610556 C2orf81A6NN90 581 aa6.9□□□□□ -1.3
SYNPO2-206ENST00000610556 A8MX80 341 aa6.9□□□□□ -1.3
SYNPO2-206ENST00000610556 PDLIM1O00151 329 aa6.9□□□□□ -1.3
SYNPO2-206ENST00000610556 MATN2O00339 956 aa6.9□□□□□ -1.3
SYNPO2-206ENST00000610556 RTN3O95197 1032 aaPredicted RBP6.9□□□□□ -1.3
SYNPO2-206ENST00000610556 FKBP9O95302 570 aa6.9□□□□□ -1.3
SYNPO2-206ENST00000610556 SIX3O95343 332 aaPredicted RBP6.9□□□□□ -1.3
SYNPO2-206ENST00000610556 EDNRBP24530 442 aa6.9□□□□□ -1.3
SYNPO2-206ENST00000610556 CLCN5P51795 746 aa6.9□□□□□ -1.3
SYNPO2-206ENST00000610556 ARHGDIAP52565 204 aa6.9□□□□□ -1.3
SYNPO2-206ENST00000610556 SOX4Q06945 474 aaPredicted RBP6.9□□□□□ -1.3
SYNPO2-206ENST00000610556 TRIM25Q14258 630 aaKnown RBP6.9□□□□□ -1.3
SYNPO2-206ENST00000610556 PSMD5Q16401 504 aa6.9□□□□□ -1.3
SYNPO2-206ENST00000610556 CTXN3Q4LDR2 81 aa6.9□□□□□ -1.3
SYNPO2-206ENST00000610556 SH3D19Q5HYK7 790 aa6.9□□□□□ -1.3
SYNPO2-206ENST00000610556 DCLRE1AQ6PJP8 1040 aa6.9□□□□□ -1.3
SYNPO2-206ENST00000610556 FKBP9P1Q75LS8 142 aa6.9□□□□□ -1.3
SYNPO2-206ENST00000610556 PRRT2Q7Z6L0 340 aaPredicted RBP6.9□□□□□ -1.3
SYNPO2-206ENST00000610556 CIR1Q86X95 450 aaPredicted RBP6.9□□□□□ -1.3
SYNPO2-206ENST00000610556 CAMK1DQ8IU85 385 aa6.9□□□□□ -1.3
SYNPO2-206ENST00000610556 CFAP52Q8N1V2 620 aa6.9□□□□□ -1.3
SYNPO2-206ENST00000610556 TMEM86AQ8N2M4 240 aa6.9□□□□□ -1.3
SYNPO2-206ENST00000610556 RIN3Q8TB24 985 aa6.9□□□□□ -1.3
SYNPO2-206ENST00000610556 GTF3C2Q8WUA4 911 aaPredicted RBP6.9□□□□□ -1.3
SYNPO2-206ENST00000610556 NPY6RQ99463 290 aa6.9□□□□□ -1.3
SYNPO2-206ENST00000610556 HGH1Q9BTY7 390 aa6.9□□□□□ -1.3
SYNPO2-206ENST00000610556 SLC39A8Q9C0K1 460 aa6.9□□□□□ -1.3
SYNPO2-206ENST00000610556 SENP6Q9GZR1 1112 aaPredicted RBP6.9□□□□□ -1.3
SYNPO2-206ENST00000610556 PRDM16Q9HAZ2 1276 aa6.9□□□□□ -1.3
SYNPO2-206ENST00000610556 ABCC13Q9NSE7 274 aa6.9□□□□□ -1.3
SYNPO2-206ENST00000610556 TAS2R13Q9NYV9 303 aa6.9□□□□□ -1.3
SYNPO2-206ENST00000610556 EMCNQ9ULC0 261 aa6.9□□□□□ -1.3
SYNPO2-206ENST00000610556 ADAMTS5Q9UNA0 930 aa6.9□□□□□ -1.3
SYNPO2-206ENST00000610556 TCAF1Q9Y4C2 921 aa6.9□□□□□ -1.3
SYNPO2-206ENST00000610556 ZNF646O15015 1829 aaPredicted RBP6.9□□□□□ -1.31
SYNPO2-206ENST00000610556 A0A087WXM4 84 aa6.9□□□□□ -1.31
SYNPO2-206ENST00000610556 A0A1B0GVG6 124 aa6.9□□□□□ -1.31
SYNPO2-206ENST00000610556 F5H5T6 163 aa6.9□□□□□ -1.31
SYNPO2-206ENST00000610556 TBC1D4O60343 1298 aa6.9□□□□□ -1.31
SYNPO2-206ENST00000610556 SLC2A4P14672 509 aa6.9□□□□□ -1.31
SYNPO2-206ENST00000610556 DNAJB2P25686 324 aa6.9□□□□□ -1.31
SYNPO2-206ENST00000610556 CD52P31358 61 aa6.9□□□□□ -1.31
SYNPO2-206ENST00000610556 HARS2P49590 506 aaKnown RBP6.9□□□□□ -1.31
SYNPO2-206ENST00000610556 RAB27AP51159 221 aa6.9□□□□□ -1.31
SYNPO2-206ENST00000610556 MTTPP55157 894 aa6.9□□□□□ -1.31
SYNPO2-206ENST00000610556 HUNKP57058 714 aa6.9□□□□□ -1.31
SYNPO2-206ENST00000610556 PPP1R3AQ16821 1122 aa6.9□□□□□ -1.31
SYNPO2-206ENST00000610556 PTPRNQ16849 979 aa6.9□□□□□ -1.31
SYNPO2-206ENST00000610556 FAM187BQ17R55 369 aa6.9□□□□□ -1.31
SYNPO2-206ENST00000610556 REP15Q6BDI9 236 aa6.9□□□□□ -1.31
SYNPO2-206ENST00000610556 MILR1Q7Z6M3 343 aa6.9□□□□□ -1.31
SYNPO2-206ENST00000610556 CNTD1Q8N815 330 aa6.9□□□□□ -1.31
SYNPO2-206ENST00000610556 ACVR1CQ8NER5 493 aa6.9□□□□□ -1.31
SYNPO2-206ENST00000610556 FBXO30Q8TB52 745 aa6.9□□□□□ -1.31
SYNPO2-206ENST00000610556 FAM81AQ8TBF8 368 aa6.9□□□□□ -1.31
SYNPO2-206ENST00000610556 SERPINB11Q96P15 392 aa6.9□□□□□ -1.31
SYNPO2-206ENST00000610556 CASS4Q9NQ75 786 aa6.9□□□□□ -1.31
SYNPO2-206ENST00000610556 SMPD4Q9NXE4 827 aa6.9□□□□□ -1.31
SYNPO2-206ENST00000610556 LIMD1Q9UGP4 676 aa6.9□□□□□ -1.31
SYNPO2-206ENST00000610556 RSL24D1Q9UHA3 163 aaKnown RBP6.9□□□□□ -1.31
SYNPO2-206ENST00000610556 H3BSA7 217 aa6.89□□□□□ -1.31
SYNPO2-206ENST00000610556 AZIN1O14977 448 aa6.89□□□□□ -1.31
SYNPO2-206ENST00000610556 CLASP2O75122 1294 aaKnown RBP6.89□□□□□ -1.31
SYNPO2-206ENST00000610556 TRMUO75648 421 aaKnown RBP6.89□□□□□ -1.31
SYNPO2-206ENST00000610556 NCK1P16333 377 aa6.89□□□□□ -1.31
SYNPO2-206ENST00000610556 RPS6KA3P51812 740 aa6.89□□□□□ -1.31
SYNPO2-206ENST00000610556 BFSP2Q13515 415 aa6.89□□□□□ -1.31
SYNPO2-206ENST00000610556 DDX39BQ13838 428 aaKnown RBP6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms