RNA–Protein interactions for RNA: ENST00000608621.5

POLR2J3-219, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 4

Gene POLR2J3, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-219ENST00000608621 PCDH12Q9NPG4 1184 aa13.5□□□□□ -0.25
POLR2J3-219ENST00000608621 GPATCH2LQ9NWQ4 482 aa13.5□□□□□ -0.25
POLR2J3-219ENST00000608621 SIRPGQ9P1W8 387 aa13.5□□□□□ -0.25
POLR2J3-219ENST00000608621 PCDHGA8Q9Y5G5 932 aa13.5□□□□□ -0.25
POLR2J3-219ENST00000608621 LRRK1Q38SD2 2015 aa13.5□□□□□ -0.25
POLR2J3-219ENST00000608621 KALRNO60229 2985 aa13.49□□□□□ -0.25
POLR2J3-219ENST00000608621 TSPAN11A1L157 253 aa13.49□□□□□ -0.25
POLR2J3-219ENST00000608621 ERVH48-1M5A8F1 160 aa13.49□□□□□ -0.25
POLR2J3-219ENST00000608621 NTN3O00634 580 aaPredicted RBP13.49□□□□□ -0.25
POLR2J3-219ENST00000608621 FGF10O15520 208 aaPredicted RBP13.49□□□□□ -0.25
POLR2J3-219ENST00000608621 PRAMEF11O60813 436 aa13.49□□□□□ -0.25
POLR2J3-219ENST00000608621 RASGRP1O95267 797 aa13.49□□□□□ -0.25
POLR2J3-219ENST00000608621 PRKCGP05129 697 aa13.49□□□□□ -0.25
POLR2J3-219ENST00000608621 ALPIP09923 528 aa13.49□□□□□ -0.25
POLR2J3-219ENST00000608621 TNFAIP3P21580 790 aa13.49□□□□□ -0.25
POLR2J3-219ENST00000608621 HTR1BP28222 390 aa13.49□□□□□ -0.25
POLR2J3-219ENST00000608621 PAPOLAP51003 745 aaKnown RBP13.49□□□□□ -0.25
POLR2J3-219ENST00000608621 NDST2P52849 883 aa13.49□□□□□ -0.25
POLR2J3-219ENST00000608621 SRP54P61011 504 aaKnown RBP13.49□□□□□ -0.25
POLR2J3-219ENST00000608621 RHDQ02161 417 aa13.49□□□□□ -0.25
POLR2J3-219ENST00000608621 SPIDRQ14159 915 aa13.49□□□□□ -0.25
POLR2J3-219ENST00000608621 AGERQ15109 404 aa13.49□□□□□ -0.25
POLR2J3-219ENST00000608621 CFAP58Q5T655 872 aa13.49□□□□□ -0.25
POLR2J3-219ENST00000608621 ERAP2Q6P179 960 aa13.49□□□□□ -0.25
POLR2J3-219ENST00000608621 LVRNQ6Q4G3 990 aa13.49□□□□□ -0.25
POLR2J3-219ENST00000608621 SASS6Q6UVJ0 657 aa13.49□□□□□ -0.25
POLR2J3-219ENST00000608621 CLEC17AQ6ZS10 378 aa13.49□□□□□ -0.25
POLR2J3-219ENST00000608621 RBM43Q6ZSC3 357 aaKnown RBP13.49□□□□□ -0.25
POLR2J3-219ENST00000608621 ZNF605Q86T29 641 aa13.49□□□□□ -0.25
POLR2J3-219ENST00000608621 SRLQ86TD4 932 aa13.49□□□□□ -0.25
POLR2J3-219ENST00000608621 ARL14Q8N4G2 192 aa13.49□□□□□ -0.25
POLR2J3-219ENST00000608621 ZNF641Q96N77 438 aaPredicted RBP13.49□□□□□ -0.25
POLR2J3-219ENST00000608621 DONSONQ9NYP3 566 aa13.49□□□□□ -0.25
POLR2J3-219ENST00000608621 GPR34Q9UPC5 381 aa13.49□□□□□ -0.25
POLR2J3-219ENST00000608621 SSUH2Q9Y2M2 353 aa13.49□□□□□ -0.25
POLR2J3-219ENST00000608621 OR1A2Q9Y585 309 aa13.49□□□□□ -0.25
POLR2J3-219ENST00000608621 CCDC187A0A096LP49 1063 aa13.48□□□□□ -0.25
POLR2J3-219ENST00000608621 ARHGAP42A6NI28 874 aa13.48□□□□□ -0.25
POLR2J3-219ENST00000608621 CDRT15L2A8MXV6 281 aa13.48□□□□□ -0.25
POLR2J3-219ENST00000608621 TNFSF15O95150 251 aa13.48□□□□□ -0.25
POLR2J3-219ENST00000608621 TNFP01375 233 aa13.48□□□□□ -0.25
POLR2J3-219ENST00000608621 PCCBP05166 539 aa13.48□□□□□ -0.25
POLR2J3-219ENST00000608621 FERP16591 822 aa13.48□□□□□ -0.25
POLR2J3-219ENST00000608621 DESP17661 470 aa13.48□□□□□ -0.25
POLR2J3-219ENST00000608621 HTR7P34969 479 aa13.48□□□□□ -0.25
POLR2J3-219ENST00000608621 RGRP47804 291 aa13.48□□□□□ -0.25
POLR2J3-219ENST00000608621 CCL7P80098 99 aa13.48□□□□□ -0.25
POLR2J3-219ENST00000608621 SKOR1P84550 965 aa13.48□□□□□ -0.25
POLR2J3-219ENST00000608621 MYL5Q02045 173 aa13.48□□□□□ -0.25
POLR2J3-219ENST00000608621 VAC14Q08AM6 782 aa13.48□□□□□ -0.25
POLR2J3-219ENST00000608621 NFATC4Q14934 902 aa13.48□□□□□ -0.25
POLR2J3-219ENST00000608621 CA9Q16790 459 aa13.48□□□□□ -0.25
POLR2J3-219ENST00000608621 BRAT1Q6PJG6 821 aa13.48□□□□□ -0.25
POLR2J3-219ENST00000608621 APTXQ7Z2E3 356 aaKnown RBP13.48□□□□□ -0.25
POLR2J3-219ENST00000608621 IRF2BP2Q7Z5L9 587 aa13.48□□□□□ -0.25
POLR2J3-219ENST00000608621 ZSWIM9Q86XI8 627 aa13.48□□□□□ -0.25
POLR2J3-219ENST00000608621 GKN2Q86XP6 184 aa13.48□□□□□ -0.25
POLR2J3-219ENST00000608621 SDR16C5Q8N3Y7 309 aa13.48□□□□□ -0.25
POLR2J3-219ENST00000608621 ARL10Q8N8L6 244 aa13.48□□□□□ -0.25
POLR2J3-219ENST00000608621 KYQ8NBH2 561 aa13.48□□□□□ -0.25
POLR2J3-219ENST00000608621 PLA2G15Q8NCC3 412 aa13.48□□□□□ -0.25
POLR2J3-219ENST00000608621 TSEN2Q8NCE0 465 aaKnown RBP13.48□□□□□ -0.25
POLR2J3-219ENST00000608621 PCDH19Q8TAB3 1148 aa13.48□□□□□ -0.25
POLR2J3-219ENST00000608621 CCDC97Q96F63 343 aaPredicted RBP13.48□□□□□ -0.25
POLR2J3-219ENST00000608621 TUBGCP5Q96RT8 1024 aa13.48□□□□□ -0.25
POLR2J3-219ENST00000608621 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.48□□□□□ -0.25
POLR2J3-219ENST00000608621 DHX35Q9H5Z1 703 aaKnown RBP13.48□□□□□ -0.25
POLR2J3-219ENST00000608621 ANO10Q9NW15 660 aa13.48□□□□□ -0.25
POLR2J3-219ENST00000608621 TAS2R14Q9NYV8 317 aa13.48□□□□□ -0.25
POLR2J3-219ENST00000608621 KLQ9UEF7 1012 aa13.48□□□□□ -0.25
POLR2J3-219ENST00000608621 RABGEF1Q9UJ41 708 aa13.48□□□□□ -0.25
POLR2J3-219ENST00000608621 AP4E1Q9UPM8 1137 aa13.48□□□□□ -0.25
POLR2J3-219ENST00000608621 TMCO5BA8MYB1 307 aa13.47□□□□□ -0.25
POLR2J3-219ENST00000608621 EEF2KO00418 725 aaKnown RBP13.47□□□□□ -0.25
POLR2J3-219ENST00000608621 DAPK3O43293 454 aa13.47□□□□□ -0.25
POLR2J3-219ENST00000608621 PALMO75781 387 aa13.47□□□□□ -0.25
POLR2J3-219ENST00000608621 CCDC172P0C7W6 258 aa13.47□□□□□ -0.25
POLR2J3-219ENST00000608621 PSMA2P25787 234 aa13.47□□□□□ -0.25
POLR2J3-219ENST00000608621 CSNK1DP48730 415 aa13.47□□□□□ -0.25
POLR2J3-219ENST00000608621 PDX1P52945 283 aa13.47□□□□□ -0.25
POLR2J3-219ENST00000608621 MAMLD1Q13495 774 aa13.47□□□□□ -0.25
POLR2J3-219ENST00000608621 ERMARDQ5T6L9 678 aa13.47□□□□□ -0.25
POLR2J3-219ENST00000608621 KCTD16Q68DU8 428 aa13.47□□□□□ -0.25
POLR2J3-219ENST00000608621 ARFGAP1Q8N6T3 406 aa13.47□□□□□ -0.25
POLR2J3-219ENST00000608621 ATL2Q8NHH9 583 aa13.47□□□□□ -0.25
POLR2J3-219ENST00000608621 CCDC74AQ96AQ1 378 aa13.47□□□□□ -0.25
POLR2J3-219ENST00000608621 WBP1Q96G27 269 aa13.47□□□□□ -0.25
POLR2J3-219ENST00000608621 WDR92Q96MX6 357 aa13.47□□□□□ -0.25
POLR2J3-219ENST00000608621 GFM1Q96RP9 751 aaKnown RBP13.47□□□□□ -0.25
POLR2J3-219ENST00000608621 PARVAQ9NVD7 372 aa13.47□□□□□ -0.25
POLR2J3-219ENST00000608621 PCSK1NQ9UHG2 260 aa13.47□□□□□ -0.25
POLR2J3-219ENST00000608621 ATP8A1Q9Y2Q0 1164 aa13.47□□□□□ -0.25
POLR2J3-219ENST00000608621 CFAP46Q8IYW2 2715 aa13.46□□□□□ -0.25
POLR2J3-219ENST00000608621 UNC13CQ8NB66 2214 aa13.46□□□□□ -0.25
POLR2J3-219ENST00000608621 A0A1W2PQM1 296 aa13.46□□□□□ -0.25
POLR2J3-219ENST00000608621 CFAP69A5D8W1 941 aa13.46□□□□□ -0.25
POLR2J3-219ENST00000608621 RECQL5O94762 991 aaPredicted RBP13.46□□□□□ -0.25
POLR2J3-219ENST00000608621 PLA2G2AP14555 144 aa13.46□□□□□ -0.25
POLR2J3-219ENST00000608621 ERCC2P18074 760 aa13.46□□□□□ -0.25
POLR2J3-219ENST00000608621 SERPINA4P29622 427 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms