RNA–Protein interactions for RNA: ENST00000607443.1

RNU4-89P-201, Transcript of RNA, U4 small nuclear 89, pseudogene, humanhuman

BASIC

Gene RNU4-89P, Length 133 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-89P-201ENST00000607443 P4HA1P13674 534 aa4.4□□□□□ -1.71
RNU4-89P-201ENST00000607443 ACAT1P24752 427 aaKnown RBP4.4□□□□□ -1.71
RNU4-89P-201ENST00000607443 ITPKBP27987 946 aa4.4□□□□□ -1.71
RNU4-89P-201ENST00000607443 ME1P48163 572 aa4.4□□□□□ -1.71
RNU4-89P-201ENST00000607443 CASP5P51878 434 aa4.4□□□□□ -1.71
RNU4-89P-201ENST00000607443 SATB1Q01826 763 aa4.4□□□□□ -1.71
RNU4-89P-201ENST00000607443 EIF2B5Q13144 721 aaKnown RBP4.4□□□□□ -1.71
RNU4-89P-201ENST00000607443 BIRC3Q13489 604 aa4.4□□□□□ -1.71
RNU4-89P-201ENST00000607443 MTF1Q14872 753 aa4.4□□□□□ -1.71
RNU4-89P-201ENST00000607443 PREPLQ4J6C6 727 aaPredicted RBP4.4□□□□□ -1.71
RNU4-89P-201ENST00000607443 AASDHQ4L235 1098 aaPredicted RBP4.4□□□□□ -1.71
RNU4-89P-201ENST00000607443 ZC3H12BQ5HYM0 836 aaKnown RBP4.4□□□□□ -1.71
RNU4-89P-201ENST00000607443 LMBRD2Q68DH5 695 aaPredicted RBP4.4□□□□□ -1.71
RNU4-89P-201ENST00000607443 IL31Q6EBC2 164 aa4.4□□□□□ -1.71
RNU4-89P-201ENST00000607443 KRTAP5-1Q6L8H4 278 aa4.4□□□□□ -1.71
RNU4-89P-201ENST00000607443 FAM173BQ6P4H8 233 aa4.4□□□□□ -1.71
RNU4-89P-201ENST00000607443 VSTM1Q6UX27 236 aa4.4□□□□□ -1.71
RNU4-89P-201ENST00000607443 DENND5BQ6ZUT9 1274 aa4.4□□□□□ -1.71
RNU4-89P-201ENST00000607443 USP49Q70CQ1 688 aa4.4□□□□□ -1.71
RNU4-89P-201ENST00000607443 UNC13DQ70J99 1090 aa4.4□□□□□ -1.71
RNU4-89P-201ENST00000607443 C11orf74Q86VG3 221 aa4.4□□□□□ -1.71
RNU4-89P-201ENST00000607443 MON1AQ86VX9 555 aa4.4□□□□□ -1.71
RNU4-89P-201ENST00000607443 DDX42Q86XP3 938 aaKnown RBP eCLIP4.4□□□□□ -1.71
RNU4-89P-201ENST00000607443 DCLK2Q8N568 766 aa4.4□□□□□ -1.71
RNU4-89P-201ENST00000607443 CAMKK1Q8N5S9 505 aa4.4□□□□□ -1.71
RNU4-89P-201ENST00000607443 XXYLT1Q8NBI6 393 aa4.4□□□□□ -1.71
RNU4-89P-201ENST00000607443 CHST14Q8NCH0 376 aa4.4□□□□□ -1.71
RNU4-89P-201ENST00000607443 LINC00301Q8NCQ3 95 aa4.4□□□□□ -1.71
RNU4-89P-201ENST00000607443 CCDC150Q8NCX0 1101 aa4.4□□□□□ -1.71
RNU4-89P-201ENST00000607443 STKLD1Q8NE28 680 aa4.4□□□□□ -1.71
RNU4-89P-201ENST00000607443 ZFP28Q8NHY6 868 aa4.4□□□□□ -1.71
RNU4-89P-201ENST00000607443 TTC8Q8TAM2 541 aa4.4□□□□□ -1.71
RNU4-89P-201ENST00000607443 MYCBPAPQ8TBZ2 947 aa4.4□□□□□ -1.71
RNU4-89P-201ENST00000607443 LRRC15Q8TF66 581 aa4.4□□□□□ -1.71
RNU4-89P-201ENST00000607443 OSCP1Q8WVF1 389 aa4.4□□□□□ -1.71
RNU4-89P-201ENST00000607443 MYLPFQ96A32 169 aa4.4□□□□□ -1.71
RNU4-89P-201ENST00000607443 SYAP1Q96A49 352 aaPredicted RBP4.4□□□□□ -1.71
RNU4-89P-201ENST00000607443 RGMAQ96B86 450 aa4.4□□□□□ -1.71
RNU4-89P-201ENST00000607443 DHX58Q96C10 678 aa4.4□□□□□ -1.71
RNU4-89P-201ENST00000607443 RMDN1Q96DB5 314 aa4.4□□□□□ -1.71
RNU4-89P-201ENST00000607443 BOD1Q96IK1 185 aa4.4□□□□□ -1.71
RNU4-89P-201ENST00000607443 HPDLQ96IR7 371 aa4.4□□□□□ -1.71
RNU4-89P-201ENST00000607443 ZFYVE19Q96K21 471 aa4.4□□□□□ -1.71
RNU4-89P-201ENST00000607443 TNIP3Q96KP6 325 aa4.4□□□□□ -1.71
RNU4-89P-201ENST00000607443 SPATA17Q96L03 361 aa4.4□□□□□ -1.71
RNU4-89P-201ENST00000607443 ZNF48Q96MX3 618 aaPredicted RBP4.4□□□□□ -1.71
RNU4-89P-201ENST00000607443 SLITRK1Q96PX8 696 aa4.4□□□□□ -1.71
RNU4-89P-201ENST00000607443 ELF4Q99607 663 aaPredicted RBP4.4□□□□□ -1.71
RNU4-89P-201ENST00000607443 P2RY13Q9BPV8 354 aa4.4□□□□□ -1.71
RNU4-89P-201ENST00000607443 CBWD1Q9BRT8 395 aa4.4□□□□□ -1.71
RNU4-89P-201ENST00000607443 IMPG2Q9BZV3 1241 aa4.4□□□□□ -1.71
RNU4-89P-201ENST00000607443 TRIM9Q9C026 710 aa4.4□□□□□ -1.71
RNU4-89P-201ENST00000607443 ELOVL4Q9GZR5 314 aa4.4□□□□□ -1.71
RNU4-89P-201ENST00000607443 EBF3Q9H4W6 596 aa4.4□□□□□ -1.71
RNU4-89P-201ENST00000607443 PDE11AQ9HCR9 933 aa4.4□□□□□ -1.71
RNU4-89P-201ENST00000607443 EXOC1Q9NV70 894 aa4.4□□□□□ -1.71
RNU4-89P-201ENST00000607443 INTS13Q9NVM9 706 aa4.4□□□□□ -1.71
RNU4-89P-201ENST00000607443 DUS2Q9NX74 493 aaKnown RBP4.4□□□□□ -1.71
RNU4-89P-201ENST00000607443 ZNF580Q9UK33 172 aa4.4□□□□□ -1.71
RNU4-89P-201ENST00000607443 GTF3C4Q9UKN8 822 aa4.4□□□□□ -1.71
RNU4-89P-201ENST00000607443 MTMR6Q9Y217 621 aa4.4□□□□□ -1.71
RNU4-89P-201ENST00000607443 GREB1Q4ZG55 1949 aa4.4□□□□□ -1.71
RNU4-89P-201ENST00000607443 ANAPC1Q9H1A4 1944 aa4.39□□□□□ -1.71
RNU4-89P-201ENST00000607443 CCDC163A0A0D9SF12 145 aa4.39□□□□□ -1.71
RNU4-89P-201ENST00000607443 PVALEFA0A1B0GWK0 134 aa4.39□□□□□ -1.71
RNU4-89P-201ENST00000607443 A8MXQ7 604 aa4.39□□□□□ -1.71
RNU4-89P-201ENST00000607443 TRDMT1O14717 391 aaKnown RBP4.39□□□□□ -1.71
RNU4-89P-201ENST00000607443 SLC9A3R1O14745 358 aaPredicted RBP4.39□□□□□ -1.71
RNU4-89P-201ENST00000607443 GABRDO14764 452 aa4.39□□□□□ -1.71
RNU4-89P-201ENST00000607443 POLR2DO15514 142 aaKnown RBP4.39□□□□□ -1.71
RNU4-89P-201ENST00000607443 EXOC3O60645 756 aa4.39□□□□□ -1.71
RNU4-89P-201ENST00000607443 TACC1O75410 805 aa4.39□□□□□ -1.71
RNU4-89P-201ENST00000607443 RPP40O75818 363 aaKnown RBP4.39□□□□□ -1.71
RNU4-89P-201ENST00000607443 RHOBTB1O94844 696 aa4.39□□□□□ -1.71
RNU4-89P-201ENST00000607443 RTN3O95197 1032 aaPredicted RBP4.39□□□□□ -1.71
RNU4-89P-201ENST00000607443 PRKCGP05129 697 aa4.39□□□□□ -1.71
RNU4-89P-201ENST00000607443 MYL1P05976 194 aa4.39□□□□□ -1.71
RNU4-89P-201ENST00000607443 FAM163BP0C2L3 166 aa4.39□□□□□ -1.71
RNU4-89P-201ENST00000607443 TDGF1P13385 188 aa4.39□□□□□ -1.71
RNU4-89P-201ENST00000607443 HMGA1P17096 107 aaKnown RBP4.39□□□□□ -1.71
RNU4-89P-201ENST00000607443 HDCP19113 662 aa4.39□□□□□ -1.71
RNU4-89P-201ENST00000607443 WT1P19544 449 aaPredicted RBP4.39□□□□□ -1.71
RNU4-89P-201ENST00000607443 SLC9A1P19634 815 aa4.39□□□□□ -1.71
RNU4-89P-201ENST00000607443 WARSP23381 471 aaKnown RBP4.39□□□□□ -1.71
RNU4-89P-201ENST00000607443 BDNFP23560 247 aa4.39□□□□□ -1.71
RNU4-89P-201ENST00000607443 CYP2F1P24903 491 aa4.39□□□□□ -1.71
RNU4-89P-201ENST00000607443 HOXA6P31267 233 aa4.39□□□□□ -1.71
RNU4-89P-201ENST00000607443 ATICP31939 592 aa4.39□□□□□ -1.71
RNU4-89P-201ENST00000607443 GPR15P49685 360 aa4.39□□□□□ -1.71
RNU4-89P-201ENST00000607443 CYP2J2P51589 502 aa4.39□□□□□ -1.71
RNU4-89P-201ENST00000607443 FOXG1P55316 489 aaPredicted RBP4.39□□□□□ -1.71
RNU4-89P-201ENST00000607443 PSMC1P62191 440 aaKnown RBP4.39□□□□□ -1.71
RNU4-89P-201ENST00000607443 GOLGA8FQ08AF8 430 aa4.39□□□□□ -1.71
RNU4-89P-201ENST00000607443 GOLGA8DPQ0D2H9 430 aa4.39□□□□□ -1.71
RNU4-89P-201ENST00000607443 PSMD6Q15008 389 aa4.39□□□□□ -1.71
RNU4-89P-201ENST00000607443 ELF2Q15723 593 aa4.39□□□□□ -1.71
RNU4-89P-201ENST00000607443 LPAL2Q16609 132 aa4.39□□□□□ -1.71
RNU4-89P-201ENST00000607443 ZNF699Q32M78 642 aa4.39□□□□□ -1.71
RNU4-89P-201ENST00000607443 MTX3Q5HYI7 312 aa4.39□□□□□ -1.71
RNU4-89P-201ENST00000607443 ZNF667Q5HYK9 610 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms