RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 SMYD2Q9NRG4 433 aa18.12■□□□□ 0.49
VRK3-225ENST00000601912 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.12■□□□□ 0.49
VRK3-225ENST00000601912 TXNDC16Q9P2K2 825 aa18.12■□□□□ 0.49
VRK3-225ENST00000601912 RPL26L1Q9UNX3 145 aaKnown RBP18.12■□□□□ 0.49
VRK3-225ENST00000601912 BRWD1Q9NSI6 2320 aa18.11■□□□□ 0.49
VRK3-225ENST00000601912 MROH6A6NGR9 719 aa18.11■□□□□ 0.49
VRK3-225ENST00000601912 FZD6O60353 706 aa18.11■□□□□ 0.49
VRK3-225ENST00000601912 ERVK-10P10266 1014 aa18.11■□□□□ 0.49
VRK3-225ENST00000601912 GRIA4P48058 902 aa18.11■□□□□ 0.49
VRK3-225ENST00000601912 CCNHP51946 323 aaPredicted RBP18.11■□□□□ 0.49
VRK3-225ENST00000601912 SMAD4Q13485 552 aaKnown RBP18.11■□□□□ 0.49
VRK3-225ENST00000601912 CCDC85BQ15834 202 aaPredicted RBP18.11■□□□□ 0.49
VRK3-225ENST00000601912 TSTD2Q5T7W7 516 aa18.11■□□□□ 0.49
VRK3-225ENST00000601912 ESRP1Q6NXG1 681 aaKnown RBP18.11■□□□□ 0.49
VRK3-225ENST00000601912 Q6ZVU0 165 aa18.11■□□□□ 0.49
VRK3-225ENST00000601912 MARK2Q7KZI7 788 aaKnown RBP18.11■□□□□ 0.49
VRK3-225ENST00000601912 KCNMB4Q86W47 210 aa18.11■□□□□ 0.49
VRK3-225ENST00000601912 CYP4X1Q8N118 509 aa18.11■□□□□ 0.49
VRK3-225ENST00000601912 TERB1Q8NA31 727 aa18.11■□□□□ 0.49
VRK3-225ENST00000601912 UCMAQ8WVF2 138 aa18.11■□□□□ 0.49
VRK3-225ENST00000601912 PEX13Q92968 403 aa18.11■□□□□ 0.49
VRK3-225ENST00000601912 UBE2ZQ9H832 354 aaPredicted RBP18.11■□□□□ 0.49
VRK3-225ENST00000601912 TREX1Q9NSU2 369 aa18.11■□□□□ 0.49
VRK3-225ENST00000601912 TBC1D3BA6NDS4 549 aa18.1■□□□□ 0.49
VRK3-225ENST00000601912 GRXCR2A6NFK2 248 aa18.1■□□□□ 0.49
VRK3-225ENST00000601912 PRRT4C9JH25 899 aa18.1■□□□□ 0.49
VRK3-225ENST00000601912 HTRA2O43464 458 aaPredicted RBP18.1■□□□□ 0.49
VRK3-225ENST00000601912 PIGNO95427 931 aa18.1■□□□□ 0.49
VRK3-225ENST00000601912 NR1D1P20393 614 aa18.1■□□□□ 0.49
VRK3-225ENST00000601912 HPDP32754 393 aaPredicted RBP18.1■□□□□ 0.49
VRK3-225ENST00000601912 OPRD1P41143 372 aa18.1■□□□□ 0.49
VRK3-225ENST00000601912 SERPINB9P50453 376 aa18.1■□□□□ 0.49
VRK3-225ENST00000601912 CNGA3Q16281 694 aa18.1■□□□□ 0.49
VRK3-225ENST00000601912 QPCTQ16769 361 aa18.1■□□□□ 0.49
VRK3-225ENST00000601912 PTPRNQ16849 979 aa18.1■□□□□ 0.49
VRK3-225ENST00000601912 PRPF38BQ5VTL8 546 aaKnown RBP18.1■□□□□ 0.49
VRK3-225ENST00000601912 KIAA0930Q6ICG6 404 aaPredicted RBP18.1■□□□□ 0.49
VRK3-225ENST00000601912 DPY19L3Q6ZPD9 716 aa18.1■□□□□ 0.49
VRK3-225ENST00000601912 ARFGAP2Q8N6H7 521 aa18.1■□□□□ 0.49
VRK3-225ENST00000601912 KDM1BQ8NB78 822 aa18.1■□□□□ 0.49
VRK3-225ENST00000601912 GABPB2Q8TAK5 448 aaPredicted RBP18.1■□□□□ 0.49
VRK3-225ENST00000601912 CSGALNACT1Q8TDX6 532 aa18.1■□□□□ 0.49
VRK3-225ENST00000601912 MYLIPQ8WY64 445 aa18.1■□□□□ 0.49
VRK3-225ENST00000601912 HACD3Q9P035 362 aa18.1■□□□□ 0.49
VRK3-225ENST00000601912 SZT2Q5T011 3432 aa18.1■□□□□ 0.49
VRK3-225ENST00000601912 ANKRD36A6QL64 1941 aa18.09■□□□□ 0.49
VRK3-225ENST00000601912 TTC34A8MYJ7 566 aa18.09■□□□□ 0.49
VRK3-225ENST00000601912 TRAFD1O14545 582 aaPredicted RBP18.09■□□□□ 0.49
VRK3-225ENST00000601912 LDB2O43679 373 aa18.09■□□□□ 0.49
VRK3-225ENST00000601912 KRT37O76014 449 aa18.09■□□□□ 0.49
VRK3-225ENST00000601912 KRT38O76015 456 aa18.09■□□□□ 0.49
VRK3-225ENST00000601912 VAPBO95292 243 aa18.09■□□□□ 0.49
VRK3-225ENST00000601912 PIRTP0C851 137 aa18.09■□□□□ 0.49
VRK3-225ENST00000601912 GKP32189 559 aa18.09■□□□□ 0.49
VRK3-225ENST00000601912 PDE1BQ01064 536 aa18.09■□□□□ 0.49
VRK3-225ENST00000601912 TAF1AQ15573 450 aaPredicted RBP18.09■□□□□ 0.49
VRK3-225ENST00000601912 HSP90AA5PQ58FG0 334 aa18.09■□□□□ 0.49
VRK3-225ENST00000601912 GLT6D1Q7Z4J2 308 aa18.09■□□□□ 0.49
VRK3-225ENST00000601912 NDUFAF2Q8N183 169 aa18.09■□□□□ 0.49
VRK3-225ENST00000601912 OR2A12Q8NGT7 310 aa18.09■□□□□ 0.49
VRK3-225ENST00000601912 FRS2Q8WU20 508 aa18.09■□□□□ 0.49
VRK3-225ENST00000601912 NXPE3Q969Y0 559 aa18.09■□□□□ 0.49
VRK3-225ENST00000601912 ZNF641Q96N77 438 aaPredicted RBP18.09■□□□□ 0.49
VRK3-225ENST00000601912 SRPK1Q96SB4 655 aaKnown RBP18.09■□□□□ 0.49
VRK3-225ENST00000601912 ZDHHC6Q9H6R6 413 aa18.09■□□□□ 0.49
VRK3-225ENST00000601912 NSMCE4AQ9NXX6 385 aa18.09■□□□□ 0.49
VRK3-225ENST00000601912 IL1RAPL1Q9NZN1 696 aa18.09■□□□□ 0.49
VRK3-225ENST00000601912 SENP1Q9P0U3 644 aa18.09■□□□□ 0.49
VRK3-225ENST00000601912 SLC2A6Q9UGQ3 507 aa18.09■□□□□ 0.49
VRK3-225ENST00000601912 RIMKLBQ9ULI2 386 aa18.09■□□□□ 0.49
VRK3-225ENST00000601912 C5orf42Q9H799 3197 aa18.09■□□□□ 0.49
VRK3-225ENST00000601912 A0A1W2PQ67 120 aa18.09■□□□□ 0.49
VRK3-225ENST00000601912 C2orf81A6NN90 581 aa18.09■□□□□ 0.49
VRK3-225ENST00000601912 WASH3PC4AMC7 463 aa18.09■□□□□ 0.49
VRK3-225ENST00000601912 ARNTLO00327 626 aa18.09■□□□□ 0.49
VRK3-225ENST00000601912 MBTPS2O43462 519 aa18.09■□□□□ 0.49
VRK3-225ENST00000601912 PRKCGP05129 697 aa18.09■□□□□ 0.49
VRK3-225ENST00000601912 CNTFP26441 200 aa18.09■□□□□ 0.49
VRK3-225ENST00000601912 SLC8A1P32418 973 aa18.09■□□□□ 0.49
VRK3-225ENST00000601912 THOC5Q13769 683 aaKnown RBP18.09■□□□□ 0.49
VRK3-225ENST00000601912 FNDC3BQ53EP0 1204 aaKnown RBP18.09■□□□□ 0.49
VRK3-225ENST00000601912 TEDDM1Q5T9Z0 273 aa18.09■□□□□ 0.49
VRK3-225ENST00000601912 EXOC3L1Q86VI1 746 aa18.09■□□□□ 0.49
VRK3-225ENST00000601912 PHTF2Q8N3S3 785 aa18.09■□□□□ 0.49
VRK3-225ENST00000601912 STYXQ8WUJ0 223 aa18.09■□□□□ 0.49
VRK3-225ENST00000601912 CPNE1Q99829 537 aa18.09■□□□□ 0.49
VRK3-225ENST00000601912 HEPHQ9BQS7 1158 aa18.09■□□□□ 0.49
VRK3-225ENST00000601912 TRABDQ9H4I3 376 aa18.09■□□□□ 0.49
VRK3-225ENST00000601912 SUV39H2Q9H5I1 410 aa18.09■□□□□ 0.49
VRK3-225ENST00000601912 ACTL7BQ9Y614 415 aa18.09■□□□□ 0.49
VRK3-225ENST00000601912 ARL5AQ9Y689 179 aa18.09■□□□□ 0.49
VRK3-225ENST00000601912 KAT7O95251 611 aa18.08■□□□□ 0.48
VRK3-225ENST00000601912 APODP05090 189 aa18.08■□□□□ 0.48
VRK3-225ENST00000601912 GRIA2P42262 883 aa18.08■□□□□ 0.48
VRK3-225ENST00000601912 ARCN1P48444 511 aaKnown RBP18.08■□□□□ 0.48
VRK3-225ENST00000601912 PRAMEP78395 509 aa18.08■□□□□ 0.48
VRK3-225ENST00000601912 MESP2Q0VG99 397 aa18.08■□□□□ 0.48
VRK3-225ENST00000601912 TRABD2AQ86V40 505 aa18.08■□□□□ 0.48
VRK3-225ENST00000601912 SRRM1Q8IYB3 904 aaKnown RBP18.08■□□□□ 0.48
VRK3-225ENST00000601912 PLCD3Q8N3E9 789 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms