RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 ACVR1Q04771 509 aa17.75■□□□□ 0.43
SHKBP1-224ENST00000600718 DLG2Q15700 870 aa17.75■□□□□ 0.43
SHKBP1-224ENST00000600718 QPCTQ16769 361 aa17.75■□□□□ 0.43
SHKBP1-224ENST00000600718 GEN1Q17RS7 908 aa17.75■□□□□ 0.43
SHKBP1-224ENST00000600718 MYLK3Q32MK0 819 aa17.75■□□□□ 0.43
SHKBP1-224ENST00000600718 ACCSLQ4AC99 568 aa17.75■□□□□ 0.43
SHKBP1-224ENST00000600718 CARD16Q5EG05 197 aa17.75■□□□□ 0.43
SHKBP1-224ENST00000600718 ARMC12Q5T9G4 340 aa17.75■□□□□ 0.43
SHKBP1-224ENST00000600718 MROH9Q5TGP6 573 aa17.75■□□□□ 0.43
SHKBP1-224ENST00000600718 TMEM215Q68D42 235 aa17.75■□□□□ 0.43
SHKBP1-224ENST00000600718 ETFBKMTQ8IXQ9 262 aa17.75■□□□□ 0.43
SHKBP1-224ENST00000600718 YAF2Q8IY57 180 aa17.75■□□□□ 0.43
SHKBP1-224ENST00000600718 STYXQ8WUJ0 223 aa17.75■□□□□ 0.43
SHKBP1-224ENST00000600718 PDCD6IPQ8WUM4 868 aaKnown RBP17.75■□□□□ 0.43
SHKBP1-224ENST00000600718 SERAC1Q96JX3 654 aa17.75■□□□□ 0.43
SHKBP1-224ENST00000600718 TUBGCP5Q96RT8 1024 aa17.75■□□□□ 0.43
SHKBP1-224ENST00000600718 FAM167BQ9BTA0 163 aa17.75■□□□□ 0.43
SHKBP1-224ENST00000600718 SLCO3A1Q9UIG8 710 aa17.75■□□□□ 0.43
SHKBP1-224ENST00000600718 HMX2A2RU54 273 aa17.75■□□□□ 0.43
SHKBP1-224ENST00000600718 TRIM24O15164 1050 aa17.75■□□□□ 0.43
SHKBP1-224ENST00000600718 SLC7A4O43246 635 aa17.75■□□□□ 0.43
SHKBP1-224ENST00000600718 HTRA2O43464 458 aaPredicted RBP17.75■□□□□ 0.43
SHKBP1-224ENST00000600718 TULP3O75386 442 aa17.75■□□□□ 0.43
SHKBP1-224ENST00000600718 PGLSO95336 258 aa17.75■□□□□ 0.43
SHKBP1-224ENST00000600718 ATP5BP06576 529 aaKnown RBP17.75■□□□□ 0.43
SHKBP1-224ENST00000600718 LAMP2P13473 410 aa17.75■□□□□ 0.43
SHKBP1-224ENST00000600718 NNMTP40261 264 aa17.75■□□□□ 0.43
SHKBP1-224ENST00000600718 SLC18A2Q05940 514 aa17.75■□□□□ 0.43
SHKBP1-224ENST00000600718 MPP2Q14168 576 aa17.75■□□□□ 0.43
SHKBP1-224ENST00000600718 TAF1AQ15573 450 aaPredicted RBP17.75■□□□□ 0.43
SHKBP1-224ENST00000600718 SMAD1Q15797 465 aaKnown RBP17.75■□□□□ 0.43
SHKBP1-224ENST00000600718 TTC19Q6DKK2 380 aaPredicted RBP17.75■□□□□ 0.43
SHKBP1-224ENST00000600718 EP400NLQ6ZTU2 488 aa17.75■□□□□ 0.43
SHKBP1-224ENST00000600718 SH2D5Q6ZV89 423 aa17.75■□□□□ 0.43
SHKBP1-224ENST00000600718 CAMK1DQ8IU85 385 aa17.75■□□□□ 0.43
SHKBP1-224ENST00000600718 RYBPQ8N488 228 aaPredicted RBP17.75■□□□□ 0.43
SHKBP1-224ENST00000600718 OR13J1Q8NGT2 312 aa17.75■□□□□ 0.43
SHKBP1-224ENST00000600718 CALML6Q8TD86 181 aa17.75■□□□□ 0.43
SHKBP1-224ENST00000600718 ELSPBP1Q96BH3 223 aa17.75■□□□□ 0.43
SHKBP1-224ENST00000600718 RBBP8Q99708 897 aa17.75■□□□□ 0.43
SHKBP1-224ENST00000600718 HACD3Q9P035 362 aa17.75■□□□□ 0.43
SHKBP1-224ENST00000600718 PCDHB9Q9Y5E1 797 aa17.75■□□□□ 0.43
SHKBP1-224ENST00000600718 A0A1W2PPC1 479 aa17.74■□□□□ 0.43
SHKBP1-224ENST00000600718 GOLGA8TH3BQL2 631 aa17.74■□□□□ 0.43
SHKBP1-224ENST00000600718 TRAFD1O14545 582 aaPredicted RBP17.74■□□□□ 0.43
SHKBP1-224ENST00000600718 TYROBPO43914 113 aa17.74■□□□□ 0.43
SHKBP1-224ENST00000600718 SPAG7O75391 227 aa17.74■□□□□ 0.43
SHKBP1-224ENST00000600718 POP4O95707 220 aaKnown RBP17.74■□□□□ 0.43
SHKBP1-224ENST00000600718 SRPRAP08240 638 aaKnown RBP17.74■□□□□ 0.43
SHKBP1-224ENST00000600718 ITGA2BP08514 1039 aa17.74■□□□□ 0.43
SHKBP1-224ENST00000600718 PIRTP0C851 137 aa17.74■□□□□ 0.43
SHKBP1-224ENST00000600718 EPHB1P54762 984 aa17.74■□□□□ 0.43
SHKBP1-224ENST00000600718 PPARDQ03181 441 aa17.74■□□□□ 0.43
SHKBP1-224ENST00000600718 RAD51Q06609 339 aa17.74■□□□□ 0.43
SHKBP1-224ENST00000600718 BMPR2Q13873 1038 aa17.74■□□□□ 0.43
SHKBP1-224ENST00000600718 UGP2Q16851 508 aa17.74■□□□□ 0.43
SHKBP1-224ENST00000600718 NEPROQ6NW34 567 aa17.74■□□□□ 0.43
SHKBP1-224ENST00000600718 CPA6Q8N4T0 437 aa17.74■□□□□ 0.43
SHKBP1-224ENST00000600718 BANPQ8N9N5 519 aa17.74■□□□□ 0.43
SHKBP1-224ENST00000600718 OR6K2Q8NGY2 324 aa17.74■□□□□ 0.43
SHKBP1-224ENST00000600718 PTPRN2Q92932 1015 aa17.74■□□□□ 0.43
SHKBP1-224ENST00000600718 MYO19Q96H55 970 aa17.74■□□□□ 0.43
SHKBP1-224ENST00000600718 MSLNLQ96KJ4 702 aa17.74■□□□□ 0.43
SHKBP1-224ENST00000600718 CPEB1Q9BZB8 566 aaKnown RBP17.74■□□□□ 0.43
SHKBP1-224ENST00000600718 HPS4Q9NQG7 708 aa17.74■□□□□ 0.43
SHKBP1-224ENST00000600718 HECAQ9UBI9 543 aaPredicted RBP17.74■□□□□ 0.43
SHKBP1-224ENST00000600718 SLC8A2Q9UPR5 921 aa17.74■□□□□ 0.43
SHKBP1-224ENST00000600718 SPO11Q9Y5K1 396 aa17.74■□□□□ 0.43
SHKBP1-224ENST00000600718 ARL5AQ9Y689 179 aa17.74■□□□□ 0.43
SHKBP1-224ENST00000600718 TRANK1O15050 2925 aa17.74■□□□□ 0.43
SHKBP1-224ENST00000600718 C2orf81A6NN90 581 aa17.73■□□□□ 0.43
SHKBP1-224ENST00000600718 TIMM44O43615 452 aa17.73■□□□□ 0.43
SHKBP1-224ENST00000600718 RFPL1O75677 317 aa17.73■□□□□ 0.43
SHKBP1-224ENST00000600718 PRKCGP05129 697 aa17.73■□□□□ 0.43
SHKBP1-224ENST00000600718 PYGBP11216 843 aa17.73■□□□□ 0.43
SHKBP1-224ENST00000600718 SERPINA4P29622 427 aa17.73■□□□□ 0.43
SHKBP1-224ENST00000600718 LTBRP36941 435 aa17.73■□□□□ 0.43
SHKBP1-224ENST00000600718 MAGEA9P43362 315 aa17.73■□□□□ 0.43
SHKBP1-224ENST00000600718 GRIA4P48058 902 aa17.73■□□□□ 0.43
SHKBP1-224ENST00000600718 GRM3Q14832 879 aa17.73■□□□□ 0.43
SHKBP1-224ENST00000600718 GRIN2CQ14957 1233 aa17.73■□□□□ 0.43
SHKBP1-224ENST00000600718 COL19A1Q14993 1142 aa17.73■□□□□ 0.43
SHKBP1-224ENST00000600718 GAB4Q2WGN9 574 aa17.73■□□□□ 0.43
SHKBP1-224ENST00000600718 C12orf40Q86WS4 652 aa17.73■□□□□ 0.43
SHKBP1-224ENST00000600718 LMNTD2Q8IXW0 634 aa17.73■□□□□ 0.43
SHKBP1-224ENST00000600718 ANKRD42Q8N9B4 389 aa17.73■□□□□ 0.43
SHKBP1-224ENST00000600718 HDAC10Q969S8 669 aa17.73■□□□□ 0.43
SHKBP1-224ENST00000600718 SGSM3Q96HU1 749 aa17.73■□□□□ 0.43
SHKBP1-224ENST00000600718 MRGPRX3Q96LB0 322 aa17.73■□□□□ 0.43
SHKBP1-224ENST00000600718 MCMBPQ9BTE3 642 aa17.73■□□□□ 0.43
SHKBP1-224ENST00000600718 PLA2G2FQ9BZM2 168 aa17.73■□□□□ 0.43
SHKBP1-224ENST00000600718 TTYH1Q9H313 450 aaPredicted RBP17.73■□□□□ 0.43
SHKBP1-224ENST00000600718 DEC1Q9P2X7 70 aa17.73■□□□□ 0.43
SHKBP1-224ENST00000600718 KCTD3Q9Y597 815 aa17.73■□□□□ 0.43
SHKBP1-224ENST00000600718 MYOFQ9NZM1 2061 aa17.73■□□□□ 0.43
SHKBP1-224ENST00000600718 GOLGA8RI6L899 631 aa17.73■□□□□ 0.43
SHKBP1-224ENST00000600718 DLDP09622 509 aaKnown RBP17.73■□□□□ 0.43
SHKBP1-224ENST00000600718 PSMC3P17980 439 aa17.73■□□□□ 0.43
SHKBP1-224ENST00000600718 PSMA3P25788 255 aa17.73■□□□□ 0.43
SHKBP1-224ENST00000600718 SLC8A1P32418 973 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms