RNA–Protein interactions for RNA: ENST00000600628.2

SSBP4-208, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-208ENST00000600628 COL27A1Q8IZC6 1860 aaPredicted RBP8.85□□□□□ -0.99
SSBP4-208ENST00000600628 hCG_1818297A0A087WSY0 165 aa8.85□□□□□ -0.99
SSBP4-208ENST00000600628 A0A0U1RQJ8 604 aa8.85□□□□□ -0.99
SSBP4-208ENST00000600628 SPTY2D1-AS1A0A0U1RR47 76 aa8.85□□□□□ -0.99
SSBP4-208ENST00000600628 SPAARA0A1B0GVQ0 90 aa8.85□□□□□ -0.99
SSBP4-208ENST00000600628 A0A1W2PQ67 120 aa8.85□□□□□ -0.99
SSBP4-208ENST00000600628 LRRD1A4D1F6 860 aa8.85□□□□□ -0.99
SSBP4-208ENST00000600628 GRID2IPA4D2P6 1211 aa8.85□□□□□ -0.99
SSBP4-208ENST00000600628 SLC31A1O15431 190 aa8.85□□□□□ -0.99
SSBP4-208ENST00000600628 FLRT2O43155 660 aa8.85□□□□□ -0.99
SSBP4-208ENST00000600628 MAGEC1O60732 1142 aa8.85□□□□□ -0.99
SSBP4-208ENST00000600628 PAK4O96013 591 aaPredicted RBP8.85□□□□□ -0.99
SSBP4-208ENST00000600628 MMP2P08253 660 aa8.85□□□□□ -0.99
SSBP4-208ENST00000600628 CCNB1P14635 433 aa8.85□□□□□ -0.99
SSBP4-208ENST00000600628 CTNNA2P26232 953 aa8.85□□□□□ -0.99
SSBP4-208ENST00000600628 EPHA8P29322 1005 aaPredicted RBP8.85□□□□□ -0.99
SSBP4-208ENST00000600628 SERPINA4P29622 427 aa8.85□□□□□ -0.99
SSBP4-208ENST00000600628 AKT2P31751 481 aa8.85□□□□□ -0.99
SSBP4-208ENST00000600628 TRIM23P36406 574 aa8.85□□□□□ -0.99
SSBP4-208ENST00000600628 MMP13P45452 471 aa8.85□□□□□ -0.99
SSBP4-208ENST00000600628 NR2C2P49116 596 aa8.85□□□□□ -0.99
SSBP4-208ENST00000600628 SCNN1BP51168 640 aa8.85□□□□□ -0.99
SSBP4-208ENST00000600628 C21orf59P57076 290 aa8.85□□□□□ -0.99
SSBP4-208ENST00000600628 SIM1P81133 766 aaPredicted RBP8.85□□□□□ -0.99
SSBP4-208ENST00000600628 ELP6Q0PNE2 266 aa8.85□□□□□ -0.99
SSBP4-208ENST00000600628 TRAF2Q12933 501 aa8.85□□□□□ -0.99
SSBP4-208ENST00000600628 SUZ12Q15022 739 aaKnown RBP8.85□□□□□ -0.99
SSBP4-208ENST00000600628 PRKD1Q15139 912 aaPredicted RBP8.85□□□□□ -0.99
SSBP4-208ENST00000600628 SLC14A2Q15849 920 aa8.85□□□□□ -0.99
SSBP4-208ENST00000600628 PPP2R5EQ16537 467 aa8.85□□□□□ -0.99
SSBP4-208ENST00000600628 TPRG1LQ5T0D9 272 aa8.85□□□□□ -0.99
SSBP4-208ENST00000600628 SPOCD1Q6ZMY3 1216 aa8.85□□□□□ -0.99
SSBP4-208ENST00000600628 ZNF662Q6ZS27 426 aa8.85□□□□□ -0.99
SSBP4-208ENST00000600628 ADAT2Q7Z6V5 191 aaKnown RBP8.85□□□□□ -0.99
SSBP4-208ENST00000600628 ZNF354CQ86Y25 554 aa8.85□□□□□ -0.99
SSBP4-208ENST00000600628 DCP2Q8IU60 420 aaKnown RBP8.85□□□□□ -0.99
SSBP4-208ENST00000600628 NAXDQ8IW45 347 aa8.85□□□□□ -0.99
SSBP4-208ENST00000600628 RAVER1Q8IY67 606 aaKnown RBP8.85□□□□□ -0.99
SSBP4-208ENST00000600628 OR13H1Q8NG92 308 aa8.85□□□□□ -0.99
SSBP4-208ENST00000600628 EXD1Q8NHP7 514 aa8.85□□□□□ -0.99
SSBP4-208ENST00000600628 PIH1D2Q8WWB5 315 aa8.85□□□□□ -0.99
SSBP4-208ENST00000600628 CAMK1GQ96NX5 476 aa8.85□□□□□ -0.99
SSBP4-208ENST00000600628 LGMNQ99538 433 aa8.85□□□□□ -0.99
SSBP4-208ENST00000600628 HERPUD2Q9BSE4 406 aa8.85□□□□□ -0.99
SSBP4-208ENST00000600628 BRD8Q9H0E9 1235 aa8.85□□□□□ -0.99
SSBP4-208ENST00000600628 FZD3Q9NPG1 666 aa8.85□□□□□ -0.99
SSBP4-208ENST00000600628 GDF3Q9NR23 364 aa8.85□□□□□ -0.99
SSBP4-208ENST00000600628 AASDHPPTQ9NRN7 309 aa8.85□□□□□ -0.99
SSBP4-208ENST00000600628 ANGPTL2Q9UKU9 493 aa8.85□□□□□ -0.99
SSBP4-208ENST00000600628 PNMA8BQ9ULN7 279 aaPredicted RBP8.85□□□□□ -0.99
SSBP4-208ENST00000600628 CA5BQ9Y2D0 317 aa8.85□□□□□ -0.99
SSBP4-208ENST00000600628 BTBD3Q9Y2F9 522 aa8.85□□□□□ -0.99
SSBP4-208ENST00000600628 PCDHA3Q9Y5H8 950 aa8.85□□□□□ -0.99
SSBP4-208ENST00000600628 ANKRD11Q6UB99 2663 aaPredicted RBP8.85□□□□□ -0.99
SSBP4-208ENST00000600628 ARHGEF17Q96PE2 2063 aaPredicted RBP8.84□□□□□ -0.99
SSBP4-208ENST00000600628 TTC24A2A3L6 582 aaPredicted RBP8.84□□□□□ -0.99
SSBP4-208ENST00000600628 TOR1BO14657 336 aa8.84□□□□□ -0.99
SSBP4-208ENST00000600628 YKT6O15498 198 aa8.84□□□□□ -0.99
SSBP4-208ENST00000600628 PCDH8O95206 1070 aa8.84□□□□□ -0.99
SSBP4-208ENST00000600628 PGLSO95336 258 aa8.84□□□□□ -0.99
SSBP4-208ENST00000600628 HLA-DQB2P05538 268 aa8.84□□□□□ -0.99
SSBP4-208ENST00000600628 HOXC4P09017 264 aaPredicted RBP8.84□□□□□ -0.99
SSBP4-208ENST00000600628 THEGLP0DJG4 465 aa8.84□□□□□ -0.99
SSBP4-208ENST00000600628 ZFXP17010 805 aaPredicted RBP8.84□□□□□ -0.99
SSBP4-208ENST00000600628 IGFALSP35858 605 aa8.84□□□□□ -0.99
SSBP4-208ENST00000600628 GJC1P36383 396 aa8.84□□□□□ -0.99
SSBP4-208ENST00000600628 CCT8P50990 548 aa8.84□□□□□ -0.99
SSBP4-208ENST00000600628 CLDN2P57739 230 aa8.84□□□□□ -0.99
SSBP4-208ENST00000600628 COPS2P61201 443 aa8.84□□□□□ -0.99
SSBP4-208ENST00000600628 YPEL5P62699 121 aa8.84□□□□□ -0.99
SSBP4-208ENST00000600628 POLR2LP62875 67 aaKnown RBP8.84□□□□□ -0.99
SSBP4-208ENST00000600628 BCL2L1Q07817 233 aa8.84□□□□□ -0.99
SSBP4-208ENST00000600628 NIPAL4Q0D2K0 466 aa8.84□□□□□ -0.99
SSBP4-208ENST00000600628 ZBTB17Q13105 803 aa8.84□□□□□ -0.99
SSBP4-208ENST00000600628 FZD2Q14332 565 aa8.84□□□□□ -0.99
SSBP4-208ENST00000600628 ZNF235Q14590 738 aa8.84□□□□□ -0.99
SSBP4-208ENST00000600628 STAT4Q14765 748 aa8.84□□□□□ -0.99
SSBP4-208ENST00000600628 TRIP6Q15654 476 aaKnown RBP8.84□□□□□ -0.99
SSBP4-208ENST00000600628 WSCD2Q2TBF2 565 aa8.84□□□□□ -0.99
SSBP4-208ENST00000600628 SLC45A4Q5BKX6 768 aa8.84□□□□□ -0.99
SSBP4-208ENST00000600628 LRRC73Q5JTD7 316 aa8.84□□□□□ -0.99
SSBP4-208ENST00000600628 TIGD7Q6NT04 549 aaPredicted RBP8.84□□□□□ -0.99
SSBP4-208ENST00000600628 BBS12Q6ZW61 710 aa8.84□□□□□ -0.99
SSBP4-208ENST00000600628 DPPA4Q7L190 304 aa8.84□□□□□ -0.99
SSBP4-208ENST00000600628 NT5DC3Q86UY8 548 aa8.84□□□□□ -0.99
SSBP4-208ENST00000600628 RCOR2Q8IZ40 523 aa8.84□□□□□ -0.99
SSBP4-208ENST00000600628 SLC25A45Q8N413 288 aa8.84□□□□□ -0.99
SSBP4-208ENST00000600628 RYBPQ8N488 228 aaPredicted RBP8.84□□□□□ -0.99
SSBP4-208ENST00000600628 OXR1Q8N573 874 aa8.84□□□□□ -0.99
SSBP4-208ENST00000600628 SETD7Q8WTS6 366 aaKnown RBP8.84□□□□□ -0.99
SSBP4-208ENST00000600628 ALG3Q92685 438 aa8.84□□□□□ -0.99
SSBP4-208ENST00000600628 KLK6Q92876 244 aa8.84□□□□□ -0.99
SSBP4-208ENST00000600628 FUBP1Q96AE4 644 aaKnown RBP8.84□□□□□ -0.99
SSBP4-208ENST00000600628 SCRN2Q96FV2 425 aa8.84□□□□□ -0.99
SSBP4-208ENST00000600628 COQ10AQ96MF6 247 aa8.84□□□□□ -0.99
SSBP4-208ENST00000600628 TRIB3Q96RU7 358 aa8.84□□□□□ -0.99
SSBP4-208ENST00000600628 LYSMD1Q96S90 227 aa8.84□□□□□ -0.99
SSBP4-208ENST00000600628 POLR1EQ9GZS1 481 aaKnown RBP8.84□□□□□ -0.99
SSBP4-208ENST00000600628 LUC7LQ9NQ29 371 aaKnown RBP8.84□□□□□ -0.99
SSBP4-208ENST00000600628 MBNL1Q9NR56 388 aaKnown RBP8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms