RNA–Protein interactions for RNA: ENST00000599322.5

LIG1-218, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-218ENST00000599322 LRRC38Q5VT99 294 aa14.25□□□□□ -0.13
LIG1-218ENST00000599322 GCNT7Q6ZNI0 430 aa14.25□□□□□ -0.13
LIG1-218ENST00000599322 BZW1Q7L1Q6 419 aaKnown RBP14.25□□□□□ -0.13
LIG1-218ENST00000599322 PARGQ86W56 976 aa14.25□□□□□ -0.13
LIG1-218ENST00000599322 GALNT15Q8N3T1 639 aa14.25□□□□□ -0.13
LIG1-218ENST00000599322 TC2NQ8N9U0 490 aa14.25□□□□□ -0.13
LIG1-218ENST00000599322 PANX2Q96RD6 677 aa14.25□□□□□ -0.13
LIG1-218ENST00000599322 POLR1EQ9GZS1 481 aaKnown RBP14.25□□□□□ -0.13
LIG1-218ENST00000599322 RBSNQ9H1K0 784 aa14.25□□□□□ -0.13
LIG1-218ENST00000599322 AMACRQ9UHK6 382 aa14.25□□□□□ -0.13
LIG1-218ENST00000599322 FAM208BQ5VWN6 2430 aa14.25□□□□□ -0.13
LIG1-218ENST00000599322 DMXL2Q8TDJ6 3036 aa14.24□□□□□ -0.13
LIG1-218ENST00000599322 POM121BA6NF01 834 aa14.24□□□□□ -0.13
LIG1-218ENST00000599322 MATN3O15232 486 aa14.24□□□□□ -0.13
LIG1-218ENST00000599322 HYAL3O43820 417 aaPredicted RBP14.24□□□□□ -0.13
LIG1-218ENST00000599322 BUB1BO60566 1050 aaPredicted RBP14.24□□□□□ -0.13
LIG1-218ENST00000599322 CPP00450 1065 aa14.24□□□□□ -0.13
LIG1-218ENST00000599322 KRT1P04264 644 aa14.24□□□□□ -0.13
LIG1-218ENST00000599322 CD48P09326 243 aa14.24□□□□□ -0.13
LIG1-218ENST00000599322 C1SP09871 688 aa14.24□□□□□ -0.13
LIG1-218ENST00000599322 ELFN1P0C7U0 828 aa14.24□□□□□ -0.13
LIG1-218ENST00000599322 CYP2A6P11509 494 aaPredicted RBP14.24□□□□□ -0.13
LIG1-218ENST00000599322 IL4RP24394 825 aa14.24□□□□□ -0.13
LIG1-218ENST00000599322 GARSP41250 739 aaKnown RBP14.24□□□□□ -0.13
LIG1-218ENST00000599322 LIG3P49916 1009 aa14.24□□□□□ -0.13
LIG1-218ENST00000599322 BLKP51451 505 aa14.24□□□□□ -0.13
LIG1-218ENST00000599322 TAS2R40P59535 323 aa14.24□□□□□ -0.13
LIG1-218ENST00000599322 DAB2P98082 770 aa14.24□□□□□ -0.13
LIG1-218ENST00000599322 GALNT2Q10471 571 aa14.24□□□□□ -0.13
LIG1-218ENST00000599322 TCEAL1Q15170 157 aa14.24□□□□□ -0.13
LIG1-218ENST00000599322 ARMC12Q5T9G4 340 aa14.24□□□□□ -0.13
LIG1-218ENST00000599322 VSIG1Q86XK7 387 aa14.24□□□□□ -0.13
LIG1-218ENST00000599322 CHCHD4Q8N4Q1 142 aa14.24□□□□□ -0.13
LIG1-218ENST00000599322 PCDH19Q8TAB3 1148 aa14.24□□□□□ -0.13
LIG1-218ENST00000599322 BMFQ96LC9 184 aa14.24□□□□□ -0.13
LIG1-218ENST00000599322 RNF157Q96PX1 679 aa14.24□□□□□ -0.13
LIG1-218ENST00000599322 DUSP23Q9BVJ7 150 aa14.24□□□□□ -0.13
LIG1-218ENST00000599322 NT5MQ9NPB1 228 aa14.24□□□□□ -0.13
LIG1-218ENST00000599322 GGT7Q9UJ14 662 aa14.24□□□□□ -0.13
LIG1-218ENST00000599322 PHTF1Q9UMS5 762 aa14.24□□□□□ -0.13
LIG1-218ENST00000599322 BTBD3Q9Y2F9 522 aa14.24□□□□□ -0.13
LIG1-218ENST00000599322 TTLL3Q9Y4R7 772 aa14.24□□□□□ -0.13
LIG1-218ENST00000599322 PCDHA13Q9Y5I0 950 aa14.24□□□□□ -0.13
LIG1-218ENST00000599322 KNL1Q8NG31 2342 aa14.24□□□□□ -0.13
LIG1-218ENST00000599322 SPTY2D1-AS1A0A0U1RR47 76 aa14.23□□□□□ -0.13
LIG1-218ENST00000599322 ZNF487B1APH4 448 aa14.23□□□□□ -0.13
LIG1-218ENST00000599322 APOL1O14791 398 aa14.23□□□□□ -0.13
LIG1-218ENST00000599322 PPP1R12AO14974 1030 aaPredicted RBP14.23□□□□□ -0.13
LIG1-218ENST00000599322 SDC3O75056 442 aa14.23□□□□□ -0.13
LIG1-218ENST00000599322 ATXN1LP0C7T5 689 aaKnown RBP14.23□□□□□ -0.13
LIG1-218ENST00000599322 C6P13671 934 aa14.23□□□□□ -0.13
LIG1-218ENST00000599322 KELP23276 732 aa14.23□□□□□ -0.13
LIG1-218ENST00000599322 RGRP47804 291 aa14.23□□□□□ -0.13
LIG1-218ENST00000599322 PEX5P50542 639 aa14.23□□□□□ -0.13
LIG1-218ENST00000599322 DUSP3P51452 185 aaPredicted RBP14.23□□□□□ -0.13
LIG1-218ENST00000599322 ARSEP51690 589 aa14.23□□□□□ -0.13
LIG1-218ENST00000599322 EPHB1P54762 984 aa14.23□□□□□ -0.13
LIG1-218ENST00000599322 ARHGEF7Q14155 803 aa14.23□□□□□ -0.13
LIG1-218ENST00000599322 TFDP2Q14188 446 aa14.23□□□□□ -0.13
LIG1-218ENST00000599322 FGL2Q14314 439 aa14.23□□□□□ -0.13
LIG1-218ENST00000599322 NCBP2-AS2Q69YL0 99 aa14.23□□□□□ -0.13
LIG1-218ENST00000599322 USP45Q70EL2 814 aa14.23□□□□□ -0.13
LIG1-218ENST00000599322 RAB44Q7Z6P3 723 aaPredicted RBP14.23□□□□□ -0.13
LIG1-218ENST00000599322 RFX6Q8HWS3 928 aa14.23□□□□□ -0.13
LIG1-218ENST00000599322 TP53INP2Q8IXH6 220 aa14.23□□□□□ -0.13
LIG1-218ENST00000599322 PNPLA1Q8N8W4 532 aa14.23□□□□□ -0.13
LIG1-218ENST00000599322 BAHD1Q8TBE0 780 aaPredicted RBP14.23□□□□□ -0.13
LIG1-218ENST00000599322 GLMNQ92990 594 aa14.23□□□□□ -0.13
LIG1-218ENST00000599322 TSGA13Q96PP4 275 aa14.23□□□□□ -0.13
LIG1-218ENST00000599322 MGME1Q9BQP7 344 aa14.23□□□□□ -0.13
LIG1-218ENST00000599322 SLC13A1Q9BZW2 595 aa14.23□□□□□ -0.13
LIG1-218ENST00000599322 RBM22Q9NW64 420 aaKnown RBP eCLIP14.23□□□□□ -0.13
LIG1-218ENST00000599322 NCKIPSDQ9NZQ3 722 aa14.23□□□□□ -0.13
LIG1-218ENST00000599322 SPASTQ9UBP0 616 aa14.23□□□□□ -0.13
LIG1-218ENST00000599322 KLK13Q9UKR3 277 aa14.23□□□□□ -0.13
LIG1-218ENST00000599322 DOLKQ9UPQ8 538 aa14.23□□□□□ -0.13
LIG1-218ENST00000599322 PCDHGA1Q9Y5H4 931 aa14.23□□□□□ -0.13
LIG1-218ENST00000599322 HEY1Q9Y5J3 304 aa14.23□□□□□ -0.13
LIG1-218ENST00000599322 EPN1Q9Y6I3 576 aaPredicted RBP14.23□□□□□ -0.13
LIG1-218ENST00000599322 TRPM6Q9BX84 2022 aa14.23□□□□□ -0.13
LIG1-218ENST00000599322 PDE2AO00408 941 aaPredicted RBP14.22□□□□□ -0.13
LIG1-218ENST00000599322 RAD51BO15315 384 aa14.22□□□□□ -0.13
LIG1-218ENST00000599322 MFSD11O43934 449 aa14.22□□□□□ -0.13
LIG1-218ENST00000599322 CSF2P04141 144 aa14.22□□□□□ -0.13
LIG1-218ENST00000599322 CTSEP14091 401 aa14.22□□□□□ -0.13
LIG1-218ENST00000599322 CCNB1P14635 433 aa14.22□□□□□ -0.13
LIG1-218ENST00000599322 JUNDP17535 347 aa14.22□□□□□ -0.13
LIG1-218ENST00000599322 CKMT2P17540 419 aa14.22□□□□□ -0.13
LIG1-218ENST00000599322 ITIH2P19823 946 aa14.22□□□□□ -0.13
LIG1-218ENST00000599322 DGKAP23743 735 aa14.22□□□□□ -0.13
LIG1-218ENST00000599322 MMP12P39900 470 aa14.22□□□□□ -0.13
LIG1-218ENST00000599322 CETN2P41208 172 aa14.22□□□□□ -0.13
LIG1-218ENST00000599322 MAXP61244 160 aa14.22□□□□□ -0.13
LIG1-218ENST00000599322 ILKQ13418 452 aa14.22□□□□□ -0.13
LIG1-218ENST00000599322 ACOX1Q15067 660 aa14.22□□□□□ -0.13
LIG1-218ENST00000599322 PDK1Q15118 436 aa14.22□□□□□ -0.13
LIG1-218ENST00000599322 SHBQ15464 509 aa14.22□□□□□ -0.13
LIG1-218ENST00000599322 FAXCQ5TGI0 409 aa14.22□□□□□ -0.13
LIG1-218ENST00000599322 CCDC13Q8IYE1 715 aa14.22□□□□□ -0.13
LIG1-218ENST00000599322 SCG3Q8WXD2 468 aaKnown RBP14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms