RNA–Protein interactions for RNA: ENST00000597828.5

SOX2-OT-228, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 864 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-228ENST00000597828 CASKIN2Q8WXE0 1202 aa12.2□□□□□ -0.46
SOX2-OT-228ENST00000597828 FUBP1Q96AE4 644 aaKnown RBP12.2□□□□□ -0.46
SOX2-OT-228ENST00000597828 CCDC74AQ96AQ1 378 aa12.2□□□□□ -0.46
SOX2-OT-228ENST00000597828 TBATAQ96M53 351 aa12.2□□□□□ -0.46
SOX2-OT-228ENST00000597828 NSMCE3Q96MG7 304 aa12.2□□□□□ -0.46
SOX2-OT-228ENST00000597828 CNPY3Q9BT09 278 aa12.2□□□□□ -0.46
SOX2-OT-228ENST00000597828 APOOQ9BUR5 198 aa12.2□□□□□ -0.46
SOX2-OT-228ENST00000597828 C1QTNF7Q9BXJ2 289 aa12.2□□□□□ -0.46
SOX2-OT-228ENST00000597828 CPEB1Q9BZB8 566 aaKnown RBP12.2□□□□□ -0.46
SOX2-OT-228ENST00000597828 SLC39A8Q9C0K1 460 aa12.2□□□□□ -0.46
SOX2-OT-228ENST00000597828 SUV39H2Q9H5I1 410 aa12.2□□□□□ -0.46
SOX2-OT-228ENST00000597828 LRRC19Q9H756 370 aa12.2□□□□□ -0.46
SOX2-OT-228ENST00000597828 CATSPERBQ9H7T0 1116 aa12.2□□□□□ -0.46
SOX2-OT-228ENST00000597828 NCKIPSDQ9NZQ3 722 aa12.2□□□□□ -0.46
SOX2-OT-228ENST00000597828 LIMA1Q9UHB6 759 aaKnown RBP12.2□□□□□ -0.46
SOX2-OT-228ENST00000597828 PADI4Q9UM07 663 aa12.2□□□□□ -0.46
SOX2-OT-228ENST00000597828 AP4E1Q9UPM8 1137 aa12.2□□□□□ -0.46
SOX2-OT-228ENST00000597828 DAAM1Q9Y4D1 1078 aa12.2□□□□□ -0.46
SOX2-OT-228ENST00000597828 CFAP46Q8IYW2 2715 aa12.19□□□□□ -0.46
SOX2-OT-228ENST00000597828 CDRT15L2A8MXV6 281 aa12.19□□□□□ -0.46
SOX2-OT-228ENST00000597828 NTN3O00634 580 aaPredicted RBP12.19□□□□□ -0.46
SOX2-OT-228ENST00000597828 RIOK3O14730 519 aaKnown RBP12.19□□□□□ -0.46
SOX2-OT-228ENST00000597828 PRAMEF11O60813 436 aa12.19□□□□□ -0.46
SOX2-OT-228ENST00000597828 TNFSF15O95150 251 aa12.19□□□□□ -0.46
SOX2-OT-228ENST00000597828 CTSEP14091 401 aa12.19□□□□□ -0.46
SOX2-OT-228ENST00000597828 HGFP14210 728 aa12.19□□□□□ -0.46
SOX2-OT-228ENST00000597828 RBMS1P29558 406 aaKnown RBP12.19□□□□□ -0.46
SOX2-OT-228ENST00000597828 LIG3P49916 1009 aa12.19□□□□□ -0.46
SOX2-OT-228ENST00000597828 CFHR1Q03591 330 aa12.19□□□□□ -0.46
SOX2-OT-228ENST00000597828 ELP6Q0PNE2 266 aa12.19□□□□□ -0.46
SOX2-OT-228ENST00000597828 LY6DQ14210 128 aa12.19□□□□□ -0.46
SOX2-OT-228ENST00000597828 INPP5AQ14642 412 aa12.19□□□□□ -0.46
SOX2-OT-228ENST00000597828 NCAPHQ15003 741 aa12.19□□□□□ -0.46
SOX2-OT-228ENST00000597828 TAF1BQ53T94 588 aaPredicted RBP12.19□□□□□ -0.46
SOX2-OT-228ENST00000597828 KIAA1614Q5VZ46 1190 aa12.19□□□□□ -0.46
SOX2-OT-228ENST00000597828 ESRP1Q6NXG1 681 aaKnown RBP12.19□□□□□ -0.46
SOX2-OT-228ENST00000597828 DCUN1D2Q6PH85 259 aa12.19□□□□□ -0.46
SOX2-OT-228ENST00000597828 IGF2-ASQ6U949 168 aa12.19□□□□□ -0.46
SOX2-OT-228ENST00000597828 TP53INP2Q8IXH6 220 aa12.19□□□□□ -0.46
SOX2-OT-228ENST00000597828 PELI3Q8N2H9 469 aa12.19□□□□□ -0.46
SOX2-OT-228ENST00000597828 SDR16C5Q8N3Y7 309 aa12.19□□□□□ -0.46
SOX2-OT-228ENST00000597828 ARFGAP1Q8N6T3 406 aa12.19□□□□□ -0.46
SOX2-OT-228ENST00000597828 NPWQ8N729 165 aa12.19□□□□□ -0.46
SOX2-OT-228ENST00000597828 GLMNQ92990 594 aa12.19□□□□□ -0.46
SOX2-OT-228ENST00000597828 NAT6Q93015 286 aa12.19□□□□□ -0.46
SOX2-OT-228ENST00000597828 SLC46A1Q96NT5 459 aa12.19□□□□□ -0.46
SOX2-OT-228ENST00000597828 ERGIC2Q96RQ1 377 aa12.19□□□□□ -0.46
SOX2-OT-228ENST00000597828 KCTD15Q96SI1 283 aaPredicted RBP12.19□□□□□ -0.46
SOX2-OT-228ENST00000597828 SYT11Q9BT88 431 aa12.19□□□□□ -0.46
SOX2-OT-228ENST00000597828 SNRNP25Q9BV90 132 aaKnown RBP12.19□□□□□ -0.46
SOX2-OT-228ENST00000597828 EDEM3Q9BZQ6 932 aa12.19□□□□□ -0.46
SOX2-OT-228ENST00000597828 FOXP3Q9BZS1 431 aa12.19□□□□□ -0.46
SOX2-OT-228ENST00000597828 TRIM7Q9C029 511 aa12.19□□□□□ -0.46
SOX2-OT-228ENST00000597828 DHX35Q9H5Z1 703 aaKnown RBP12.19□□□□□ -0.46
SOX2-OT-228ENST00000597828 MRPL40Q9NQ50 206 aaKnown RBP12.19□□□□□ -0.46
SOX2-OT-228ENST00000597828 DOLKQ9UPQ8 538 aa12.19□□□□□ -0.46
SOX2-OT-228ENST00000597828 ATP8A1Q9Y2Q0 1164 aa12.19□□□□□ -0.46
SOX2-OT-228ENST00000597828 CCDC187A0A096LP49 1063 aa12.18□□□□□ -0.46
SOX2-OT-228ENST00000597828 A0A1W2PQM1 296 aa12.18□□□□□ -0.46
SOX2-OT-228ENST00000597828 TTC24A2A3L6 582 aaPredicted RBP12.18□□□□□ -0.46
SOX2-OT-228ENST00000597828 ANKRD62A6NC57 917 aa12.18□□□□□ -0.46
SOX2-OT-228ENST00000597828 A8MX80 341 aa12.18□□□□□ -0.46
SOX2-OT-228ENST00000597828 ERVH48-1M5A8F1 160 aa12.18□□□□□ -0.46
SOX2-OT-228ENST00000597828 EEF2KO00418 725 aaKnown RBP12.18□□□□□ -0.46
SOX2-OT-228ENST00000597828 FGF10O15520 208 aaPredicted RBP12.18□□□□□ -0.46
SOX2-OT-228ENST00000597828 TCEA3O75764 348 aa12.18□□□□□ -0.46
SOX2-OT-228ENST00000597828 RASGRP1O95267 797 aa12.18□□□□□ -0.46
SOX2-OT-228ENST00000597828 ATP1A3P13637 1013 aa12.18□□□□□ -0.46
SOX2-OT-228ENST00000597828 GM2AP17900 193 aa12.18□□□□□ -0.46
SOX2-OT-228ENST00000597828 PSMA2P25787 234 aa12.18□□□□□ -0.46
SOX2-OT-228ENST00000597828 RPIAP49247 311 aa12.18□□□□□ -0.46
SOX2-OT-228ENST00000597828 PAPOLAP51003 745 aaKnown RBP12.18□□□□□ -0.46
SOX2-OT-228ENST00000597828 SRP54P61011 504 aaKnown RBP12.18□□□□□ -0.46
SOX2-OT-228ENST00000597828 CCL7P80098 99 aa12.18□□□□□ -0.46
SOX2-OT-228ENST00000597828 MYL5Q02045 173 aa12.18□□□□□ -0.46
SOX2-OT-228ENST00000597828 SRSF6Q13247 344 aaKnown RBP12.18□□□□□ -0.46
SOX2-OT-228ENST00000597828 CLN3Q13286 438 aa12.18□□□□□ -0.46
SOX2-OT-228ENST00000597828 ELOCQ15369 112 aa12.18□□□□□ -0.46
SOX2-OT-228ENST00000597828 CFAP58Q5T655 872 aa12.18□□□□□ -0.46
SOX2-OT-228ENST00000597828 ACAD10Q6JQN1 1059 aa12.18□□□□□ -0.46
SOX2-OT-228ENST00000597828 CYP4V2Q6ZWL3 525 aaPredicted RBP12.18□□□□□ -0.46
SOX2-OT-228ENST00000597828 ARHGAP12Q8IWW6 846 aa12.18□□□□□ -0.46
SOX2-OT-228ENST00000597828 ARL10Q8N8L6 244 aa12.18□□□□□ -0.46
SOX2-OT-228ENST00000597828 TPCN2Q8NHX9 752 aa12.18□□□□□ -0.46
SOX2-OT-228ENST00000597828 WDR36Q8NI36 951 aaKnown RBP12.18□□□□□ -0.46
SOX2-OT-228ENST00000597828 OR1E3Q8WZA6 343 aa12.18□□□□□ -0.46
SOX2-OT-228ENST00000597828 TTC9Q92623 222 aa12.18□□□□□ -0.46
SOX2-OT-228ENST00000597828 WDR92Q96MX6 357 aa12.18□□□□□ -0.46
SOX2-OT-228ENST00000597828 EPB41L5Q9HCM4 733 aa12.18□□□□□ -0.46
SOX2-OT-228ENST00000597828 FGF22Q9HCT0 170 aa12.18□□□□□ -0.46
SOX2-OT-228ENST00000597828 KLQ9UEF7 1012 aa12.18□□□□□ -0.46
SOX2-OT-228ENST00000597828 PCSK1NQ9UHG2 260 aa12.18□□□□□ -0.46
SOX2-OT-228ENST00000597828 GPR34Q9UPC5 381 aa12.18□□□□□ -0.46
SOX2-OT-228ENST00000597828 PCDHGA8Q9Y5G5 932 aa12.18□□□□□ -0.46
SOX2-OT-228ENST00000597828 ZNF462Q96JM2 2506 aa12.18□□□□□ -0.46
SOX2-OT-228ENST00000597828 TENM4Q6N022 2769 aa12.17□□□□□ -0.46
SOX2-OT-228ENST00000597828 TMEM202A6NGA9 273 aa12.17□□□□□ -0.46
SOX2-OT-228ENST00000597828 D6RAR5 112 aa12.17□□□□□ -0.46
SOX2-OT-228ENST00000597828 PYCARD-AS1I3L0S3 204 aa12.17□□□□□ -0.46
SOX2-OT-228ENST00000597828 DFFAO00273 331 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms