RNA–Protein interactions for RNA: ENST00000597724.6

SSBP4-204, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-204ENST00000597724 KIF5AQ12840 1032 aa16.85■□□□□ 0.29
SSBP4-204ENST00000597724 TFDP2Q14188 446 aa16.85■□□□□ 0.29
SSBP4-204ENST00000597724 TFDP3Q5H9I0 405 aa16.85■□□□□ 0.29
SSBP4-204ENST00000597724 ERAP2Q6P179 960 aa16.85■□□□□ 0.29
SSBP4-204ENST00000597724 NAXDQ8IW45 347 aa16.85■□□□□ 0.29
SSBP4-204ENST00000597724 TXLNBQ8N3L3 684 aa16.85■□□□□ 0.29
SSBP4-204ENST00000597724 LRRC57Q8N9N7 239 aa16.85■□□□□ 0.29
SSBP4-204ENST00000597724 OR13H1Q8NG92 308 aa16.85■□□□□ 0.29
SSBP4-204ENST00000597724 EXD1Q8NHP7 514 aa16.85■□□□□ 0.29
SSBP4-204ENST00000597724 OLFM3Q96PB7 478 aa16.85■□□□□ 0.29
SSBP4-204ENST00000597724 SEMA3CQ99985 751 aa16.85■□□□□ 0.29
SSBP4-204ENST00000597724 WRAP53Q9BUR4 548 aaKnown RBP16.85■□□□□ 0.29
SSBP4-204ENST00000597724 POLR1EQ9GZS1 481 aaKnown RBP16.85■□□□□ 0.29
SSBP4-204ENST00000597724 PCDHA3Q9Y5H8 950 aa16.85■□□□□ 0.29
SSBP4-204ENST00000597724 hCG_1818297A0A087WSY0 165 aa16.84■□□□□ 0.29
SSBP4-204ENST00000597724 A0A0U1RQJ8 604 aa16.84■□□□□ 0.29
SSBP4-204ENST00000597724 A0A1W2PQ67 120 aa16.84■□□□□ 0.29
SSBP4-204ENST00000597724 MED19A0JLT2 244 aaPredicted RBP16.84■□□□□ 0.29
SSBP4-204ENST00000597724 A6NNZ2 444 aa16.84■□□□□ 0.29
SSBP4-204ENST00000597724 PCDHGA12O60330 932 aa16.84■□□□□ 0.29
SSBP4-204ENST00000597724 CST8O60676 142 aa16.84■□□□□ 0.29
SSBP4-204ENST00000597724 TM7SF2O76062 418 aa16.84■□□□□ 0.29
SSBP4-204ENST00000597724 PRKCGP05129 697 aa16.84■□□□□ 0.29
SSBP4-204ENST00000597724 KCNA4P22459 653 aa16.84■□□□□ 0.29
SSBP4-204ENST00000597724 MMP12P39900 470 aa16.84■□□□□ 0.29
SSBP4-204ENST00000597724 NR2C2P49116 596 aa16.84■□□□□ 0.29
SSBP4-204ENST00000597724 LIG3P49916 1009 aa16.84■□□□□ 0.29
SSBP4-204ENST00000597724 FAM193AP78312 1265 aa16.84■□□□□ 0.29
SSBP4-204ENST00000597724 ADCY2Q08462 1091 aa16.84■□□□□ 0.29
SSBP4-204ENST00000597724 ITKQ08881 620 aa16.84■□□□□ 0.29
SSBP4-204ENST00000597724 TRAF2Q12933 501 aa16.84■□□□□ 0.29
SSBP4-204ENST00000597724 SUZ12Q15022 739 aaKnown RBP16.84■□□□□ 0.29
SSBP4-204ENST00000597724 PDK1Q15118 436 aa16.84■□□□□ 0.29
SSBP4-204ENST00000597724 SHBQ15464 509 aa16.84■□□□□ 0.29
SSBP4-204ENST00000597724 KAZNQ674X7 775 aa16.84■□□□□ 0.29
SSBP4-204ENST00000597724 OXR1Q8N573 874 aa16.84■□□□□ 0.29
SSBP4-204ENST00000597724 PAF1Q8N7H5 531 aa16.84■□□□□ 0.29
SSBP4-204ENST00000597724 DENND6BQ8NEG7 585 aa16.84■□□□□ 0.29
SSBP4-204ENST00000597724 CENPTQ96BT3 561 aa16.84■□□□□ 0.29
SSBP4-204ENST00000597724 RBM41Q96IZ5 413 aaKnown RBP16.84■□□□□ 0.29
SSBP4-204ENST00000597724 CAMK1GQ96NX5 476 aa16.84■□□□□ 0.29
SSBP4-204ENST00000597724 IL12RB2Q99665 862 aa16.84■□□□□ 0.29
SSBP4-204ENST00000597724 BRD8Q9H0E9 1235 aa16.84■□□□□ 0.29
SSBP4-204ENST00000597724 PCDHB9Q9Y5E1 797 aa16.84■□□□□ 0.29
SSBP4-204ENST00000597724 CCDC66A2RUB6 948 aa16.83■□□□□ 0.28
SSBP4-204ENST00000597724 GRID2IPA4D2P6 1211 aa16.83■□□□□ 0.28
SSBP4-204ENST00000597724 CFAP69A5D8W1 941 aa16.83■□□□□ 0.28
SSBP4-204ENST00000597724 KCNK1O00180 336 aa16.83■□□□□ 0.28
SSBP4-204ENST00000597724 FPGTO14772 594 aa16.83■□□□□ 0.28
SSBP4-204ENST00000597724 FLRT2O43155 660 aa16.83■□□□□ 0.28
SSBP4-204ENST00000597724 CBFA2T3O75081 653 aa16.83■□□□□ 0.28
SSBP4-204ENST00000597724 NEBLO76041 1014 aa16.83■□□□□ 0.28
SSBP4-204ENST00000597724 JCHAINP01591 159 aa16.83■□□□□ 0.28
SSBP4-204ENST00000597724 CTNNA2P26232 953 aa16.83■□□□□ 0.28
SSBP4-204ENST00000597724 RXRGP48443 463 aa16.83■□□□□ 0.28
SSBP4-204ENST00000597724 ARRB1P49407 418 aaPredicted RBP16.83■□□□□ 0.28
SSBP4-204ENST00000597724 IFI35P80217 286 aaPredicted RBP16.83■□□□□ 0.28
SSBP4-204ENST00000597724 IL9RQ01113 521 aa16.83■□□□□ 0.28
SSBP4-204ENST00000597724 SEMG2Q02383 582 aa16.83■□□□□ 0.28
SSBP4-204ENST00000597724 DSC2Q02487 901 aa16.83■□□□□ 0.28
SSBP4-204ENST00000597724 AP1B1Q10567 949 aa16.83■□□□□ 0.28
SSBP4-204ENST00000597724 IHHQ14623 411 aa16.83■□□□□ 0.28
SSBP4-204ENST00000597724 AGERQ15109 404 aa16.83■□□□□ 0.28
SSBP4-204ENST00000597724 LLGL1Q15334 1064 aa16.83■□□□□ 0.28
SSBP4-204ENST00000597724 KYAT3Q6YP21 454 aaKnown RBP16.83■□□□□ 0.28
SSBP4-204ENST00000597724 Q6ZSR6 202 aa16.83■□□□□ 0.28
SSBP4-204ENST00000597724 DPPA4Q7L190 304 aa16.83■□□□□ 0.28
SSBP4-204ENST00000597724 BZW1Q7L1Q6 419 aaKnown RBP16.83■□□□□ 0.28
SSBP4-204ENST00000597724 DCP2Q8IU60 420 aaKnown RBP16.83■□□□□ 0.28
SSBP4-204ENST00000597724 CCDC50Q8IVM0 306 aa16.83■□□□□ 0.28
SSBP4-204ENST00000597724 ARRDC2Q8TBH0 407 aa16.83■□□□□ 0.28
SSBP4-204ENST00000597724 PDCD6IPQ8WUM4 868 aaKnown RBP16.83■□□□□ 0.28
SSBP4-204ENST00000597724 GPR27Q9NS67 375 aa16.83■□□□□ 0.28
SSBP4-204ENST00000597724 HAUS2Q9NVX0 235 aa16.83■□□□□ 0.28
SSBP4-204ENST00000597724 SAE1Q9UBE0 346 aaPredicted RBP16.83■□□□□ 0.28
SSBP4-204ENST00000597724 TRIM10Q9UDY6 481 aa16.83■□□□□ 0.28
SSBP4-204ENST00000597724 LRRK1Q38SD2 2015 aa16.82■□□□□ 0.28
SSBP4-204ENST00000597724 MACROD2A1Z1Q3 448 aa16.82■□□□□ 0.28
SSBP4-204ENST00000597724 PPP1R12AO14974 1030 aaPredicted RBP16.82■□□□□ 0.28
SSBP4-204ENST00000597724 YKT6O15498 198 aa16.82■□□□□ 0.28
SSBP4-204ENST00000597724 PGLSO95336 258 aa16.82■□□□□ 0.28
SSBP4-204ENST00000597724 CPP00450 1065 aa16.82■□□□□ 0.28
SSBP4-204ENST00000597724 HLA-DQB2P05538 268 aa16.82■□□□□ 0.28
SSBP4-204ENST00000597724 C6P13671 934 aa16.82■□□□□ 0.28
SSBP4-204ENST00000597724 PECAM1P16284 738 aaPredicted RBP16.82■□□□□ 0.28
SSBP4-204ENST00000597724 TGM2P21980 687 aa16.82■□□□□ 0.28
SSBP4-204ENST00000597724 PEX5P50542 639 aa16.82■□□□□ 0.28
SSBP4-204ENST00000597724 COPS2P61201 443 aa16.82■□□□□ 0.28
SSBP4-204ENST00000597724 NIPAL4Q0D2K0 466 aa16.82■□□□□ 0.28
SSBP4-204ENST00000597724 RALGDSQ12967 914 aa16.82■□□□□ 0.28
SSBP4-204ENST00000597724 ZBTB17Q13105 803 aa16.82■□□□□ 0.28
SSBP4-204ENST00000597724 PPP2R5EQ16537 467 aa16.82■□□□□ 0.28
SSBP4-204ENST00000597724 N4BP2L1Q5TBK1 243 aaPredicted RBP16.82■□□□□ 0.28
SSBP4-204ENST00000597724 LIPIQ6XZB0 460 aa16.82■□□□□ 0.28
SSBP4-204ENST00000597724 NT5DC3Q86UY8 548 aa16.82■□□□□ 0.28
SSBP4-204ENST00000597724 SLC22A18ASQ8N1D0 253 aa16.82■□□□□ 0.28
SSBP4-204ENST00000597724 CNTD1Q8N815 330 aa16.82■□□□□ 0.28
SSBP4-204ENST00000597724 TP53I13Q8NBR0 393 aaPredicted RBP16.82■□□□□ 0.28
SSBP4-204ENST00000597724 SAP25Q8TEE9 199 aa16.82■□□□□ 0.28
SSBP4-204ENST00000597724 SETD7Q8WTS6 366 aaKnown RBP16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms