RNA–Protein interactions for RNA: ENST00000596379.1

LINC02560-201, Transcript of long intergenic non-protein coding RNA 2560, humanhuman

BASIC

Gene LINC02560, Length 459 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02560-201ENST00000596379 PCDH19Q8TAB3 1148 aa16.06■□□□□ 0.16
LINC02560-201ENST00000596379 TTC9Q92623 222 aa16.06■□□□□ 0.16
LINC02560-201ENST00000596379 PCMTD1Q96MG8 357 aaPredicted RBP16.06■□□□□ 0.16
LINC02560-201ENST00000596379 MCEEQ96PE7 176 aa16.06■□□□□ 0.16
LINC02560-201ENST00000596379 APOOQ9BUR5 198 aa16.06■□□□□ 0.16
LINC02560-201ENST00000596379 SEMA4CQ9C0C4 833 aa16.06■□□□□ 0.16
LINC02560-201ENST00000596379 PCDH12Q9NPG4 1184 aa16.06■□□□□ 0.16
LINC02560-201ENST00000596379 FANCLQ9NW38 375 aa16.06■□□□□ 0.16
LINC02560-201ENST00000596379 RABGEF1Q9UJ41 708 aa16.06■□□□□ 0.16
LINC02560-201ENST00000596379 OR1A2Q9Y585 309 aa16.06■□□□□ 0.16
LINC02560-201ENST00000596379 CFAP46Q8IYW2 2715 aa16.06■□□□□ 0.16
LINC02560-201ENST00000596379 LRP4O75096 1905 aa16.06■□□□□ 0.16
LINC02560-201ENST00000596379 TSPAN11A1L157 253 aa16.05■□□□□ 0.16
LINC02560-201ENST00000596379 ANKRD62A6NC57 917 aa16.05■□□□□ 0.16
LINC02560-201ENST00000596379 J3KR12 359 aa16.05■□□□□ 0.16
LINC02560-201ENST00000596379 K7ENP7 123 aa16.05■□□□□ 0.16
LINC02560-201ENST00000596379 MLLT3P42568 568 aaPredicted RBP16.05■□□□□ 0.16
LINC02560-201ENST00000596379 LIG3P49916 1009 aa16.05■□□□□ 0.16
LINC02560-201ENST00000596379 COPB1P53618 953 aaKnown RBP16.05■□□□□ 0.16
LINC02560-201ENST00000596379 SRP54P61011 504 aaKnown RBP16.05■□□□□ 0.16
LINC02560-201ENST00000596379 CCL7P80098 99 aa16.05■□□□□ 0.16
LINC02560-201ENST00000596379 GRM3Q14832 879 aa16.05■□□□□ 0.16
LINC02560-201ENST00000596379 NFATC4Q14934 902 aa16.05■□□□□ 0.16
LINC02560-201ENST00000596379 KIAA1614Q5VZ46 1190 aa16.05■□□□□ 0.16
LINC02560-201ENST00000596379 INO80CQ6PI98 192 aaPredicted RBP16.05■□□□□ 0.16
LINC02560-201ENST00000596379 B3GNT8Q7Z7M8 397 aa16.05■□□□□ 0.16
LINC02560-201ENST00000596379 GKN2Q86XP6 184 aa16.05■□□□□ 0.16
LINC02560-201ENST00000596379 CAMK1DQ8IU85 385 aa16.05■□□□□ 0.16
LINC02560-201ENST00000596379 NEK11Q8NG66 645 aa16.05■□□□□ 0.16
LINC02560-201ENST00000596379 CCDC74AQ96AQ1 378 aa16.05■□□□□ 0.16
LINC02560-201ENST00000596379 ZNF641Q96N77 438 aaPredicted RBP16.05■□□□□ 0.16
LINC02560-201ENST00000596379 AGPAT1Q99943 283 aa16.05■□□□□ 0.16
LINC02560-201ENST00000596379 CNPY3Q9BT09 278 aa16.05■□□□□ 0.16
LINC02560-201ENST00000596379 LRRC19Q9H756 370 aa16.05■□□□□ 0.16
LINC02560-201ENST00000596379 GPR34Q9UPC5 381 aa16.05■□□□□ 0.16
LINC02560-201ENST00000596379 ANKRD36A6QL64 1941 aa16.05■□□□□ 0.16
LINC02560-201ENST00000596379 FGF10O15520 208 aaPredicted RBP16.04■□□□□ 0.16
LINC02560-201ENST00000596379 PRKCGP05129 697 aa16.04■□□□□ 0.16
LINC02560-201ENST00000596379 PCCBP05166 539 aa16.04■□□□□ 0.16
LINC02560-201ENST00000596379 ITGA2BP08514 1039 aa16.04■□□□□ 0.16
LINC02560-201ENST00000596379 AIF1P55008 147 aa16.04■□□□□ 0.16
LINC02560-201ENST00000596379 CLN3Q13286 438 aa16.04■□□□□ 0.16
LINC02560-201ENST00000596379 AGERQ15109 404 aa16.04■□□□□ 0.16
LINC02560-201ENST00000596379 PPP1R15BQ5SWA1 713 aa16.04■□□□□ 0.16
LINC02560-201ENST00000596379 CFAP58Q5T655 872 aa16.04■□□□□ 0.16
LINC02560-201ENST00000596379 ERAP2Q6P179 960 aa16.04■□□□□ 0.16
LINC02560-201ENST00000596379 DCUN1D2Q6PH85 259 aa16.04■□□□□ 0.16
LINC02560-201ENST00000596379 CCDC81Q6ZN84 652 aa16.04■□□□□ 0.16
LINC02560-201ENST00000596379 ZSWIM9Q86XI8 627 aa16.04■□□□□ 0.16
LINC02560-201ENST00000596379 SDR16C5Q8N3Y7 309 aa16.04■□□□□ 0.16
LINC02560-201ENST00000596379 FBXO39Q8N4B4 442 aa16.04■□□□□ 0.16
LINC02560-201ENST00000596379 LIN37Q96GY3 246 aaPredicted RBP16.04■□□□□ 0.16
LINC02560-201ENST00000596379 CELF6Q96J87 481 aaKnown RBP16.04■□□□□ 0.16
LINC02560-201ENST00000596379 WDR92Q96MX6 357 aa16.04■□□□□ 0.16
LINC02560-201ENST00000596379 GFM1Q96RP9 751 aaKnown RBP16.04■□□□□ 0.16
LINC02560-201ENST00000596379 SLC39A8Q9C0K1 460 aa16.04■□□□□ 0.16
LINC02560-201ENST00000596379 PDFQ9HBH1 243 aa16.04■□□□□ 0.16
LINC02560-201ENST00000596379 EPB41L5Q9HCM4 733 aa16.04■□□□□ 0.16
LINC02560-201ENST00000596379 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.04■□□□□ 0.16
LINC02560-201ENST00000596379 KLQ9UEF7 1012 aa16.04■□□□□ 0.16
LINC02560-201ENST00000596379 ATMQ13315 3056 aa16.04■□□□□ 0.16
LINC02560-201ENST00000596379 SETXQ7Z333 2677 aaKnown RBP16.03■□□□□ 0.16
LINC02560-201ENST00000596379 FLNBO75369 2602 aaKnown RBP16.03■□□□□ 0.16
LINC02560-201ENST00000596379 A0A1W2PQM1 296 aa16.03■□□□□ 0.16
LINC02560-201ENST00000596379 PLD2O14939 933 aa16.03■□□□□ 0.16
LINC02560-201ENST00000596379 PRAMEF11O60813 436 aa16.03■□□□□ 0.16
LINC02560-201ENST00000596379 TNFP01375 233 aa16.03■□□□□ 0.16
LINC02560-201ENST00000596379 RPLP0P05388 317 aaKnown RBP16.03■□□□□ 0.16
LINC02560-201ENST00000596379 MMP12P39900 470 aa16.03■□□□□ 0.16
LINC02560-201ENST00000596379 RGRP47804 291 aa16.03■□□□□ 0.16
LINC02560-201ENST00000596379 NDST2P52849 883 aa16.03■□□□□ 0.16
LINC02560-201ENST00000596379 TPI1P60174 286 aa16.03■□□□□ 0.16
LINC02560-201ENST00000596379 OGDHQ02218 1023 aa16.03■□□□□ 0.16
LINC02560-201ENST00000596379 MTM1Q13496 603 aa16.03■□□□□ 0.16
LINC02560-201ENST00000596379 ZSCAN23Q3MJ62 389 aa16.03■□□□□ 0.16
LINC02560-201ENST00000596379 KCTD16Q68DU8 428 aa16.03■□□□□ 0.16
LINC02560-201ENST00000596379 ACAD10Q6JQN1 1059 aa16.03■□□□□ 0.16
LINC02560-201ENST00000596379 BRAT1Q6PJG6 821 aa16.03■□□□□ 0.16
LINC02560-201ENST00000596379 RAB11FIP2Q7L804 512 aa16.03■□□□□ 0.16
LINC02560-201ENST00000596379 SRLQ86TD4 932 aa16.03■□□□□ 0.16
LINC02560-201ENST00000596379 MCOLN2Q8IZK6 566 aa16.03■□□□□ 0.16
LINC02560-201ENST00000596379 PLA2G15Q8NCC3 412 aa16.03■□□□□ 0.16
LINC02560-201ENST00000596379 ATL2Q8NHH9 583 aa16.03■□□□□ 0.16
LINC02560-201ENST00000596379 FOXP3Q9BZS1 431 aa16.03■□□□□ 0.16
LINC02560-201ENST00000596379 LRRN3Q9H3W5 708 aa16.03■□□□□ 0.16
LINC02560-201ENST00000596379 WDR70Q9NW82 654 aa16.03■□□□□ 0.16
LINC02560-201ENST00000596379 GPATCH2LQ9NWQ4 482 aa16.03■□□□□ 0.16
LINC02560-201ENST00000596379 ATP8A1Q9Y2Q0 1164 aa16.03■□□□□ 0.16
LINC02560-201ENST00000596379 D6RAR5 112 aa16.02■□□□□ 0.16
LINC02560-201ENST00000596379 TMX2-CTNND1H3BSU7 103 aa16.02■□□□□ 0.16
LINC02560-201ENST00000596379 J3QKU1 62 aa16.02■□□□□ 0.16
LINC02560-201ENST00000596379 SLC5A2P31639 672 aa16.02■□□□□ 0.16
LINC02560-201ENST00000596379 UGT1A5P35504 534 aa16.02■□□□□ 0.16
LINC02560-201ENST00000596379 CSNK1DP48730 415 aa16.02■□□□□ 0.16
LINC02560-201ENST00000596379 PAPOLAP51003 745 aaKnown RBP16.02■□□□□ 0.16
LINC02560-201ENST00000596379 INHBCP55103 352 aa16.02■□□□□ 0.16
LINC02560-201ENST00000596379 UBXN1Q04323 297 aa16.02■□□□□ 0.16
LINC02560-201ENST00000596379 TSEN2Q8NCE0 465 aaKnown RBP16.02■□□□□ 0.16
LINC02560-201ENST00000596379 GPR156Q8NFN8 814 aa16.02■□□□□ 0.16
LINC02560-201ENST00000596379 OR6C4Q8NGE1 309 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms