RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 PPFIA2O75334 1257 aa13.04□□□□□ -0.32
SCAF1-202ENST00000595242 PIAS2O75928 621 aa13.04□□□□□ -0.32
SCAF1-202ENST00000595242 SYF2O95926 243 aaKnown RBP13.04□□□□□ -0.32
SCAF1-202ENST00000595242 KRT3P12035 628 aa13.04□□□□□ -0.32
SCAF1-202ENST00000595242 NUDT1P36639 197 aa13.04□□□□□ -0.32
SCAF1-202ENST00000595242 SCNN1AP37088 669 aa13.04□□□□□ -0.32
SCAF1-202ENST00000595242 CETN2P41208 172 aa13.04□□□□□ -0.32
SCAF1-202ENST00000595242 CSKP41240 450 aa13.04□□□□□ -0.32
SCAF1-202ENST00000595242 MLLT3P42568 568 aaPredicted RBP13.04□□□□□ -0.32
SCAF1-202ENST00000595242 YWHAGP61981 247 aaKnown RBP eCLIP13.04□□□□□ -0.32
SCAF1-202ENST00000595242 SLC25A11Q02978 314 aaKnown RBP13.04□□□□□ -0.32
SCAF1-202ENST00000595242 TRADDQ15628 312 aa13.04□□□□□ -0.32
SCAF1-202ENST00000595242 GOLGA7BQ2TAP0 167 aa13.04□□□□□ -0.32
SCAF1-202ENST00000595242 IQCKQ8N0W5 287 aa13.04□□□□□ -0.32
SCAF1-202ENST00000595242 WDR36Q8NI36 951 aaKnown RBP13.04□□□□□ -0.32
SCAF1-202ENST00000595242 JOSD2Q8TAC2 188 aa13.04□□□□□ -0.32
SCAF1-202ENST00000595242 IFT81Q8WYA0 676 aa13.04□□□□□ -0.32
SCAF1-202ENST00000595242 ARRDC3Q96B67 414 aa13.04□□□□□ -0.32
SCAF1-202ENST00000595242 LRRC45Q96CN5 670 aa13.04□□□□□ -0.32
SCAF1-202ENST00000595242 HERPUD2Q9BSE4 406 aa13.04□□□□□ -0.32
SCAF1-202ENST00000595242 DUSP16Q9BY84 665 aa13.04□□□□□ -0.32
SCAF1-202ENST00000595242 OSBPL8Q9BZF1 889 aa13.04□□□□□ -0.32
SCAF1-202ENST00000595242 DNAI2Q9GZS0 605 aa13.04□□□□□ -0.32
SCAF1-202ENST00000595242 SLC25A18Q9H1K4 315 aa13.04□□□□□ -0.32
SCAF1-202ENST00000595242 ZDHHC18Q9NUE0 388 aa13.04□□□□□ -0.32
SCAF1-202ENST00000595242 EFR3BQ9Y2G0 817 aa13.04□□□□□ -0.32
SCAF1-202ENST00000595242 EDDM13A0A1B0GTR0 161 aa13.03□□□□□ -0.32
SCAF1-202ENST00000595242 GOLGA6BA6NDN3 693 aa13.03□□□□□ -0.32
SCAF1-202ENST00000595242 TBL1XO60907 577 aa13.03□□□□□ -0.32
SCAF1-202ENST00000595242 LRCH4O75427 683 aa13.03□□□□□ -0.32
SCAF1-202ENST00000595242 IL1BP01584 269 aa13.03□□□□□ -0.32
SCAF1-202ENST00000595242 ASLP04424 464 aa13.03□□□□□ -0.32
SCAF1-202ENST00000595242 RFC1P35251 1148 aaPredicted RBP13.03□□□□□ -0.32
SCAF1-202ENST00000595242 DRD3P35462 400 aa13.03□□□□□ -0.32
SCAF1-202ENST00000595242 SRSF6Q13247 344 aaKnown RBP13.03□□□□□ -0.32
SCAF1-202ENST00000595242 HLTFQ14527 1009 aaKnown RBP eCLIP13.03□□□□□ -0.32
SCAF1-202ENST00000595242 TGIF1Q15583 401 aa13.03□□□□□ -0.32
SCAF1-202ENST00000595242 CCNG2Q16589 344 aa13.03□□□□□ -0.32
SCAF1-202ENST00000595242 TAZQ16635 292 aa13.03□□□□□ -0.32
SCAF1-202ENST00000595242 CDKN3Q16667 212 aa13.03□□□□□ -0.32
SCAF1-202ENST00000595242 SETMARQ53H47 684 aaPredicted RBP13.03□□□□□ -0.32
SCAF1-202ENST00000595242 HSP90B2PQ58FF3 399 aa13.03□□□□□ -0.32
SCAF1-202ENST00000595242 MPP7Q5T2T1 576 aa13.03□□□□□ -0.32
SCAF1-202ENST00000595242 PPP1R26Q5T8A7 1209 aaPredicted RBP13.03□□□□□ -0.32
SCAF1-202ENST00000595242 DRICH1Q6PGQ1 229 aaPredicted RBP13.03□□□□□ -0.32
SCAF1-202ENST00000595242 LRIG3Q6UXM1 1119 aa13.03□□□□□ -0.32
SCAF1-202ENST00000595242 RBM44Q6ZP01 1051 aaKnown RBP13.03□□□□□ -0.32
SCAF1-202ENST00000595242 TMEM110Q86TL2 294 aa13.03□□□□□ -0.32
SCAF1-202ENST00000595242 ZDHHC17Q8IUH5 632 aa13.03□□□□□ -0.32
SCAF1-202ENST00000595242 STK40Q8N2I9 435 aa13.03□□□□□ -0.32
SCAF1-202ENST00000595242 KDM1BQ8NB78 822 aa13.03□□□□□ -0.32
SCAF1-202ENST00000595242 GRK7Q8WTQ7 553 aa13.03□□□□□ -0.32
SCAF1-202ENST00000595242 SLC35F5Q8WV83 523 aa13.03□□□□□ -0.32
SCAF1-202ENST00000595242 LMLNQ96KR4 655 aa13.03□□□□□ -0.32
SCAF1-202ENST00000595242 TXLNGYQ9BZA5 131 aa13.03□□□□□ -0.32
SCAF1-202ENST00000595242 KDM4CQ9H3R0 1056 aa13.03□□□□□ -0.32
SCAF1-202ENST00000595242 ST7Q9NRC1 585 aa13.03□□□□□ -0.32
SCAF1-202ENST00000595242 METTL5Q9NRN9 209 aaKnown RBP13.03□□□□□ -0.32
SCAF1-202ENST00000595242 GRHL1Q9NZI5 618 aa13.03□□□□□ -0.32
SCAF1-202ENST00000595242 SFMBT1Q9UHJ3 866 aa13.03□□□□□ -0.32
SCAF1-202ENST00000595242 ERVW-1Q9UQF0 538 aa13.03□□□□□ -0.32
SCAF1-202ENST00000595242 CENPEQ02224 2701 aa13.03□□□□□ -0.32
SCAF1-202ENST00000595242 hCG_1818297A0A087WSY0 165 aa13.02□□□□□ -0.33
SCAF1-202ENST00000595242 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.02□□□□□ -0.33
SCAF1-202ENST00000595242 CPED1A4D0V7 1026 aa13.02□□□□□ -0.33
SCAF1-202ENST00000595242 K7ESM1 405 aa13.02□□□□□ -0.33
SCAF1-202ENST00000595242 SCAMP1O15126 338 aa13.02□□□□□ -0.33
SCAF1-202ENST00000595242 NOBOXO60393 691 aa13.02□□□□□ -0.33
SCAF1-202ENST00000595242 HSF2BPO75031 334 aa13.02□□□□□ -0.33
SCAF1-202ENST00000595242 NEBLO76041 1014 aa13.02□□□□□ -0.33
SCAF1-202ENST00000595242 ECEL1O95672 775 aa13.02□□□□□ -0.33
SCAF1-202ENST00000595242 KRT1P04264 644 aa13.02□□□□□ -0.33
SCAF1-202ENST00000595242 ITGA2BP08514 1039 aa13.02□□□□□ -0.33
SCAF1-202ENST00000595242 KRT7P08729 469 aa13.02□□□□□ -0.33
SCAF1-202ENST00000595242 TCF4P15884 667 aa13.02□□□□□ -0.33
SCAF1-202ENST00000595242 PSMA2P25787 234 aa13.02□□□□□ -0.33
SCAF1-202ENST00000595242 MZF1P28698 734 aaPredicted RBP13.02□□□□□ -0.33
SCAF1-202ENST00000595242 PCK1P35558 622 aa13.02□□□□□ -0.33
SCAF1-202ENST00000595242 CTSOP43234 321 aaPredicted RBP13.02□□□□□ -0.33
SCAF1-202ENST00000595242 SNX16P57768 344 aa13.02□□□□□ -0.33
SCAF1-202ENST00000595242 ZNF177Q13360 481 aaPredicted RBP13.02□□□□□ -0.33
SCAF1-202ENST00000595242 PTK6Q13882 451 aa13.02□□□□□ -0.33
SCAF1-202ENST00000595242 IGFBP7Q16270 282 aa13.02□□□□□ -0.33
SCAF1-202ENST00000595242 TBR1Q16650 682 aa13.02□□□□□ -0.33
SCAF1-202ENST00000595242 PIK3R6Q5UE93 754 aa13.02□□□□□ -0.33
SCAF1-202ENST00000595242 RFWD3Q6PCD5 774 aa13.02□□□□□ -0.33
SCAF1-202ENST00000595242 ZDHHC24Q6UX98 284 aa13.02□□□□□ -0.33
SCAF1-202ENST00000595242 SPOCD1Q6ZMY3 1216 aa13.02□□□□□ -0.33
SCAF1-202ENST00000595242 ARCQ7LC44 396 aa13.02□□□□□ -0.33
SCAF1-202ENST00000595242 TRIM69Q86WT6 500 aa13.02□□□□□ -0.33
SCAF1-202ENST00000595242 MFN1Q8IWA4 741 aa13.02□□□□□ -0.33
SCAF1-202ENST00000595242 FAM26EQ8N5C1 309 aa13.02□□□□□ -0.33
SCAF1-202ENST00000595242 ARFGAP1Q8N6T3 406 aa13.02□□□□□ -0.33
SCAF1-202ENST00000595242 ZNF557Q8N988 423 aaPredicted RBP13.02□□□□□ -0.33
SCAF1-202ENST00000595242 FIBINQ8TAL6 211 aa13.02□□□□□ -0.33
SCAF1-202ENST00000595242 GDAP1L1Q96MZ0 367 aa13.02□□□□□ -0.33
SCAF1-202ENST00000595242 DUSP23Q9BVJ7 150 aa13.02□□□□□ -0.33
SCAF1-202ENST00000595242 EPN3Q9H201 632 aa13.02□□□□□ -0.33
SCAF1-202ENST00000595242 FEZ2Q9UHY8 353 aaPredicted RBP13.02□□□□□ -0.33
SCAF1-202ENST00000595242 SLCO3A1Q9UIG8 710 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms