RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 AFMIDQ63HM1 303 aa17.21■□□□□ 0.35
SHKBP1-205ENST00000594973 GRAMD4Q6IC98 578 aa17.21■□□□□ 0.35
SHKBP1-205ENST00000594973 TIGD7Q6NT04 549 aaPredicted RBP17.21■□□□□ 0.35
SHKBP1-205ENST00000594973 FBXL22Q6P050 247 aa17.21■□□□□ 0.35
SHKBP1-205ENST00000594973 ATP6V0D2Q8N8Y2 350 aa17.21■□□□□ 0.35
SHKBP1-205ENST00000594973 PABPC5Q96DU9 382 aaKnown RBP17.21■□□□□ 0.35
SHKBP1-205ENST00000594973 CCDC97Q96F63 343 aaPredicted RBP17.21■□□□□ 0.35
SHKBP1-205ENST00000594973 HMCESQ96FZ2 354 aa17.21■□□□□ 0.35
SHKBP1-205ENST00000594973 VPS50Q96JG6 964 aa17.21■□□□□ 0.35
SHKBP1-205ENST00000594973 BTN2A3PQ96KV6 586 aa17.21■□□□□ 0.35
SHKBP1-205ENST00000594973 ZNF395Q9H8N7 513 aaPredicted RBP17.21■□□□□ 0.35
SHKBP1-205ENST00000594973 PAK6Q9NQU5 681 aaPredicted RBP17.21■□□□□ 0.35
SHKBP1-205ENST00000594973 IARS2Q9NSE4 1012 aaKnown RBP17.21■□□□□ 0.35
SHKBP1-205ENST00000594973 ZNF711Q9Y462 761 aa17.21■□□□□ 0.35
SHKBP1-205ENST00000594973 DTNAQ9Y4J8 743 aa17.21■□□□□ 0.35
SHKBP1-205ENST00000594973 MAGEB16A2A368 324 aa17.2■□□□□ 0.34
SHKBP1-205ENST00000594973 TMEM247A6NEH6 219 aa17.2■□□□□ 0.34
SHKBP1-205ENST00000594973 J3KR12 359 aa17.2■□□□□ 0.34
SHKBP1-205ENST00000594973 CACNG3O60359 315 aa17.2■□□□□ 0.34
SHKBP1-205ENST00000594973 ATF6P18850 670 aa17.2■□□□□ 0.34
SHKBP1-205ENST00000594973 PCSK6P29122 969 aa17.2■□□□□ 0.34
SHKBP1-205ENST00000594973 BST1Q10588 318 aa17.2■□□□□ 0.34
SHKBP1-205ENST00000594973 TRIP4Q15650 581 aaPredicted RBP17.2■□□□□ 0.34
SHKBP1-205ENST00000594973 PCSK7Q16549 785 aa17.2■□□□□ 0.34
SHKBP1-205ENST00000594973 HSF5Q4G112 596 aaPredicted RBP17.2■□□□□ 0.34
SHKBP1-205ENST00000594973 N4BP2L1Q5TBK1 243 aaPredicted RBP17.2■□□□□ 0.34
SHKBP1-205ENST00000594973 GRTP1Q5TC63 336 aa17.2■□□□□ 0.34
SHKBP1-205ENST00000594973 CES4AQ5XG92 561 aa17.2■□□□□ 0.34
SHKBP1-205ENST00000594973 PGM2L1Q6PCE3 622 aa17.2■□□□□ 0.34
SHKBP1-205ENST00000594973 ZCCHC23Q6ZST2 131 aa17.2■□□□□ 0.34
SHKBP1-205ENST00000594973 ZNF683Q8IZ20 524 aa17.2■□□□□ 0.34
SHKBP1-205ENST00000594973 FBXO22Q8NEZ5 403 aa17.2■□□□□ 0.34
SHKBP1-205ENST00000594973 ATP2A3Q93084 1043 aa17.2■□□□□ 0.34
SHKBP1-205ENST00000594973 E2F7Q96AV8 911 aa17.2■□□□□ 0.34
SHKBP1-205ENST00000594973 HSPBAP1Q96EW2 488 aa17.2■□□□□ 0.34
SHKBP1-205ENST00000594973 KLHL5Q96PQ7 755 aa17.2■□□□□ 0.34
SHKBP1-205ENST00000594973 FSD1LQ9BXM9 530 aa17.2■□□□□ 0.34
SHKBP1-205ENST00000594973 GRIP2Q9C0E4 1043 aa17.2■□□□□ 0.34
SHKBP1-205ENST00000594973 PFDN4Q9NQP4 134 aa17.2■□□□□ 0.34
SHKBP1-205ENST00000594973 PRDM5Q9NQX1 630 aaPredicted RBP17.2■□□□□ 0.34
SHKBP1-205ENST00000594973 TRIM43BA6NCK2 446 aa17.2■□□□□ 0.34
SHKBP1-205ENST00000594973 TLR5O60602 858 aa17.2■□□□□ 0.34
SHKBP1-205ENST00000594973 RHOQP17081 205 aa17.2■□□□□ 0.34
SHKBP1-205ENST00000594973 PMLP29590 882 aa17.2■□□□□ 0.34
SHKBP1-205ENST00000594973 ITKQ08881 620 aa17.2■□□□□ 0.34
SHKBP1-205ENST00000594973 DCLK2Q8N568 766 aa17.2■□□□□ 0.34
SHKBP1-205ENST00000594973 ABHD8Q96I13 439 aa17.2■□□□□ 0.34
SHKBP1-205ENST00000594973 SPATA17Q96L03 361 aa17.2■□□□□ 0.34
SHKBP1-205ENST00000594973 RPRD1AQ96P16 312 aaPredicted RBP17.2■□□□□ 0.34
SHKBP1-205ENST00000594973 SEZ6LQ9BYH1 1024 aa17.2■□□□□ 0.34
SHKBP1-205ENST00000594973 CAB39LQ9H9S4 337 aa17.2■□□□□ 0.34
SHKBP1-205ENST00000594973 OLA1Q9NTK5 396 aaKnown RBP17.2■□□□□ 0.34
SHKBP1-205ENST00000594973 FAF1Q9UNN5 650 aaPredicted RBP17.2■□□□□ 0.34
SHKBP1-205ENST00000594973 PSMD3O43242 534 aa17.19■□□□□ 0.34
SHKBP1-205ENST00000594973 DNAJA2O60884 412 aa17.19■□□□□ 0.34
SHKBP1-205ENST00000594973 CDH2P19022 906 aaPredicted RBP17.19■□□□□ 0.34
SHKBP1-205ENST00000594973 OR1D2P34982 312 aa17.19■□□□□ 0.34
SHKBP1-205ENST00000594973 HOXD12P35452 270 aa17.19■□□□□ 0.34
SHKBP1-205ENST00000594973 MAXP61244 160 aa17.19■□□□□ 0.34
SHKBP1-205ENST00000594973 ATG16L1Q676U5 607 aa17.19■□□□□ 0.34
SHKBP1-205ENST00000594973 FSTL4Q6MZW2 842 aa17.19■□□□□ 0.34
SHKBP1-205ENST00000594973 TMEM126BQ8IUX1 230 aa17.19■□□□□ 0.34
SHKBP1-205ENST00000594973 RBBP8Q99708 897 aa17.19■□□□□ 0.34
SHKBP1-205ENST00000594973 TMEM175Q9BSA9 504 aa17.19■□□□□ 0.34
SHKBP1-205ENST00000594973 C6orf203Q9P0P8 240 aaPredicted RBP17.19■□□□□ 0.34
SHKBP1-205ENST00000594973 CEPT1Q9Y6K0 416 aa17.19■□□□□ 0.34
SHKBP1-205ENST00000594973 LAMA3Q16787 3333 aa17.19■□□□□ 0.34
SHKBP1-205ENST00000594973 SLC38A8A6NNN8 435 aa17.19■□□□□ 0.34
SHKBP1-205ENST00000594973 WASH4PA8MWX3 477 aa17.19■□□□□ 0.34
SHKBP1-205ENST00000594973 BPGMP07738 259 aa17.19■□□□□ 0.34
SHKBP1-205ENST00000594973 GRAMD1BQ3KR37 738 aa17.19■□□□□ 0.34
SHKBP1-205ENST00000594973 UMODL1-AS1Q8N2C9 162 aa17.19■□□□□ 0.34
SHKBP1-205ENST00000594973 ACMSDQ8TDX5 336 aa17.19■□□□□ 0.34
SHKBP1-205ENST00000594973 PSMG2Q969U7 264 aa17.19■□□□□ 0.34
SHKBP1-205ENST00000594973 MYEOVQ96EZ4 313 aa17.19■□□□□ 0.34
SHKBP1-205ENST00000594973 MRPL1Q9BYD6 325 aaKnown RBP17.19■□□□□ 0.34
SHKBP1-205ENST00000594973 NT5MQ9NPB1 228 aa17.19■□□□□ 0.34
SHKBP1-205ENST00000594973 SNX15Q9NRS6 342 aa17.19■□□□□ 0.34
SHKBP1-205ENST00000594973 SIRPGQ9P1W8 387 aa17.19■□□□□ 0.34
SHKBP1-205ENST00000594973 EMCNQ9ULC0 261 aa17.19■□□□□ 0.34
SHKBP1-205ENST00000594973 PLXNA3P51805 1871 aa17.18■□□□□ 0.34
SHKBP1-205ENST00000594973 NYNRINQ9P2P1 1898 aaKnown RBP17.18■□□□□ 0.34
SHKBP1-205ENST00000594973 TTC24A2A3L6 582 aaPredicted RBP17.18■□□□□ 0.34
SHKBP1-205ENST00000594973 BOLA2-SMG1P6H3BVE0 249 aa17.18■□□□□ 0.34
SHKBP1-205ENST00000594973 CCL5P13501 91 aa17.18■□□□□ 0.34
SHKBP1-205ENST00000594973 SPRP35270 261 aaPredicted RBP17.18■□□□□ 0.34
SHKBP1-205ENST00000594973 CHRNA4P43681 627 aa17.18■□□□□ 0.34
SHKBP1-205ENST00000594973 KCNQ1P51787 676 aa17.18■□□□□ 0.34
SHKBP1-205ENST00000594973 GEMP55040 296 aa17.18■□□□□ 0.34
SHKBP1-205ENST00000594973 RPL10AP62906 217 aaKnown RBP17.18■□□□□ 0.34
SHKBP1-205ENST00000594973 SLC10A7Q0GE19 358 aa17.18■□□□□ 0.34
SHKBP1-205ENST00000594973 ANO4Q32M45 955 aa17.18■□□□□ 0.34
SHKBP1-205ENST00000594973 DENND5AQ6IQ26 1287 aa17.18■□□□□ 0.34
SHKBP1-205ENST00000594973 SLC15A3Q8IY34 581 aa17.18■□□□□ 0.34
SHKBP1-205ENST00000594973 GCNAQ96QF7 691 aa17.18■□□□□ 0.34
SHKBP1-205ENST00000594973 ZNF358Q9NW07 568 aa17.18■□□□□ 0.34
SHKBP1-205ENST00000594973 TMEM248Q9NWD8 314 aa17.18■□□□□ 0.34
SHKBP1-205ENST00000594973 UBAP1Q9NZ09 502 aa17.18■□□□□ 0.34
SHKBP1-205ENST00000594973 MARCOQ9UEW3 520 aaPredicted RBP17.18■□□□□ 0.34
SHKBP1-205ENST00000594973 PRR5-ARHGAP8B1AHC4 643 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms