RNA–Protein interactions for RNA: ENST00000592885.5

APOC1-209, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-209ENST00000592885 HK3P52790 923 aa13.38□□□□□ -0.27
APOC1-209ENST00000592885 AP1S1P61966 158 aa13.38□□□□□ -0.27
APOC1-209ENST00000592885 POLR2LP62875 67 aaKnown RBP13.38□□□□□ -0.27
APOC1-209ENST00000592885 GABREP78334 506 aa13.38□□□□□ -0.27
APOC1-209ENST00000592885 KLHL30Q0D2K2 578 aa13.38□□□□□ -0.27
APOC1-209ENST00000592885 NFATC4Q14934 902 aa13.38□□□□□ -0.27
APOC1-209ENST00000592885 ELOCQ15369 112 aa13.38□□□□□ -0.27
APOC1-209ENST00000592885 CDKN3Q16667 212 aa13.38□□□□□ -0.27
APOC1-209ENST00000592885 CA9Q16790 459 aa13.38□□□□□ -0.27
APOC1-209ENST00000592885 ISXQ2M1V0 245 aa13.38□□□□□ -0.27
APOC1-209ENST00000592885 FAXCQ5TGI0 409 aa13.38□□□□□ -0.27
APOC1-209ENST00000592885 ESRP1Q6NXG1 681 aaKnown RBP13.38□□□□□ -0.27
APOC1-209ENST00000592885 GUSBP11Q6P575 273 aa13.38□□□□□ -0.27
APOC1-209ENST00000592885 RBM44Q6ZP01 1051 aaKnown RBP13.38□□□□□ -0.27
APOC1-209ENST00000592885 CYP4V2Q6ZWL3 525 aaPredicted RBP13.38□□□□□ -0.27
APOC1-209ENST00000592885 ZNF571Q7Z3V5 609 aaPredicted RBP13.38□□□□□ -0.27
APOC1-209ENST00000592885 SRLQ86TD4 932 aa13.38□□□□□ -0.27
APOC1-209ENST00000592885 ARHGAP12Q8IWW6 846 aa13.38□□□□□ -0.27
APOC1-209ENST00000592885 ARFGAP1Q8N6T3 406 aa13.38□□□□□ -0.27
APOC1-209ENST00000592885 ZNF248Q8NDW4 579 aa13.38□□□□□ -0.27
APOC1-209ENST00000592885 SCG3Q8WXD2 468 aaKnown RBP13.38□□□□□ -0.27
APOC1-209ENST00000592885 SPOCK2Q92563 424 aa13.38□□□□□ -0.27
APOC1-209ENST00000592885 ZNF653Q96CK0 615 aa13.38□□□□□ -0.27
APOC1-209ENST00000592885 ECHDC3Q96DC8 303 aa13.38□□□□□ -0.27
APOC1-209ENST00000592885 ZNF599Q96NL3 588 aa13.38□□□□□ -0.27
APOC1-209ENST00000592885 PEBP4Q96S96 227 aa13.38□□□□□ -0.27
APOC1-209ENST00000592885 PRORYQ9H606 182 aa13.38□□□□□ -0.27
APOC1-209ENST00000592885 ZWILCHQ9H900 591 aa13.38□□□□□ -0.27
APOC1-209ENST00000592885 PCSK1NQ9UHG2 260 aa13.38□□□□□ -0.27
APOC1-209ENST00000592885 NBEAQ8NFP9 2946 aa13.37□□□□□ -0.27
APOC1-209ENST00000592885 A0A1W2PQ67 120 aa13.37□□□□□ -0.27
APOC1-209ENST00000592885 CPED1A4D0V7 1026 aa13.37□□□□□ -0.27
APOC1-209ENST00000592885 H3BRJ5 948 aa13.37□□□□□ -0.27
APOC1-209ENST00000592885 USP12O75317 370 aa13.37□□□□□ -0.27
APOC1-209ENST00000592885 GCATO75600 419 aa13.37□□□□□ -0.27
APOC1-209ENST00000592885 FTLP02792 175 aaPredicted RBP13.37□□□□□ -0.27
APOC1-209ENST00000592885 TSHRP16473 764 aa13.37□□□□□ -0.27
APOC1-209ENST00000592885 ITPKBP27987 946 aa13.37□□□□□ -0.27
APOC1-209ENST00000592885 HSPA9P38646 679 aaKnown RBP13.37□□□□□ -0.27
APOC1-209ENST00000592885 MLLT3P42568 568 aaPredicted RBP13.37□□□□□ -0.27
APOC1-209ENST00000592885 ZNF165P49910 485 aa13.37□□□□□ -0.27
APOC1-209ENST00000592885 ADKP55263 362 aaKnown RBP13.37□□□□□ -0.27
APOC1-209ENST00000592885 BCL2L1Q07817 233 aa13.37□□□□□ -0.27
APOC1-209ENST00000592885 DPYSQ14117 519 aa13.37□□□□□ -0.27
APOC1-209ENST00000592885 DPYSL2Q16555 572 aa13.37□□□□□ -0.27
APOC1-209ENST00000592885 WSCD2Q2TBF2 565 aa13.37□□□□□ -0.27
APOC1-209ENST00000592885 PPP6R3Q5H9R7 873 aaPredicted RBP13.37□□□□□ -0.27
APOC1-209ENST00000592885 CAMK1DQ8IU85 385 aa13.37□□□□□ -0.27
APOC1-209ENST00000592885 SLC35F3Q8IY50 421 aa13.37□□□□□ -0.27
APOC1-209ENST00000592885 ARL10Q8N8L6 244 aa13.37□□□□□ -0.27
APOC1-209ENST00000592885 NETO2Q8NC67 525 aa13.37□□□□□ -0.27
APOC1-209ENST00000592885 LSM14AQ8ND56 463 aaKnown RBP13.37□□□□□ -0.27
APOC1-209ENST00000592885 HIC2Q96JB3 615 aa13.37□□□□□ -0.27
APOC1-209ENST00000592885 PSKH2Q96QS6 385 aa13.37□□□□□ -0.27
APOC1-209ENST00000592885 ISCUQ9H1K1 167 aa13.37□□□□□ -0.27
APOC1-209ENST00000592885 TCEAL2Q9H3H9 227 aaPredicted RBP13.37□□□□□ -0.27
APOC1-209ENST00000592885 CAAP1Q9H8G2 361 aa13.37□□□□□ -0.27
APOC1-209ENST00000592885 THSD1Q9NS62 852 aa13.37□□□□□ -0.27
APOC1-209ENST00000592885 SEPT3Q9UH03 358 aa13.37□□□□□ -0.27
APOC1-209ENST00000592885 PNMA8BQ9ULN7 279 aaPredicted RBP13.37□□□□□ -0.27
APOC1-209ENST00000592885 DOLKQ9UPQ8 538 aa13.37□□□□□ -0.27
APOC1-209ENST00000592885 BZW2Q9Y6E2 419 aaKnown RBP13.37□□□□□ -0.27
APOC1-209ENST00000592885 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.36□□□□□ -0.27
APOC1-209ENST00000592885 EIF4E1BA6NMX2 242 aaKnown RBP13.36□□□□□ -0.27
APOC1-209ENST00000592885 TK2O00142 265 aa13.36□□□□□ -0.27
APOC1-209ENST00000592885 DFFAO00273 331 aa13.36□□□□□ -0.27
APOC1-209ENST00000592885 DDX3XO00571 662 aaKnown RBP eCLIP13.36□□□□□ -0.271e-7■■■■■ 82.7
APOC1-209ENST00000592885 YY2O15391 372 aa13.36□□□□□ -0.27
APOC1-209ENST00000592885 BUB1BO60566 1050 aaPredicted RBP13.36□□□□□ -0.27
APOC1-209ENST00000592885 MPOP05164 745 aa13.36□□□□□ -0.27
APOC1-209ENST00000592885 MYF5P13349 255 aa13.36□□□□□ -0.27
APOC1-209ENST00000592885 ITIH2P19823 946 aa13.36□□□□□ -0.27
APOC1-209ENST00000592885 TGM2P21980 687 aa13.36□□□□□ -0.27
APOC1-209ENST00000592885 KELP23276 732 aa13.36□□□□□ -0.27
APOC1-209ENST00000592885 NFKBIAP25963 317 aa13.36□□□□□ -0.27
APOC1-209ENST00000592885 ARL4AP40617 200 aa13.36□□□□□ -0.27
APOC1-209ENST00000592885 RGRP47804 291 aa13.36□□□□□ -0.27
APOC1-209ENST00000592885 LIG3P49916 1009 aa13.36□□□□□ -0.27
APOC1-209ENST00000592885 UCNP55089 124 aa13.36□□□□□ -0.27
APOC1-209ENST00000592885 KIAA1024LP59773 190 aa13.36□□□□□ -0.27
APOC1-209ENST00000592885 ALG11Q2TAA5 492 aa13.36□□□□□ -0.27
APOC1-209ENST00000592885 E4F1Q66K89 784 aaPredicted RBP13.36□□□□□ -0.27
APOC1-209ENST00000592885 DPPA4Q7L190 304 aa13.36□□□□□ -0.27
APOC1-209ENST00000592885 GKN2Q86XP6 184 aa13.36□□□□□ -0.27
APOC1-209ENST00000592885 NPWQ8N729 165 aa13.36□□□□□ -0.27
APOC1-209ENST00000592885 TSEN2Q8NCE0 465 aaKnown RBP13.36□□□□□ -0.27
APOC1-209ENST00000592885 OR6C4Q8NGE1 309 aa13.36□□□□□ -0.27
APOC1-209ENST00000592885 IQCDQ96DY2 449 aa13.36□□□□□ -0.27
APOC1-209ENST00000592885 WDR92Q96MX6 357 aa13.36□□□□□ -0.27
APOC1-209ENST00000592885 FCRL3Q96P31 734 aaPredicted RBP13.36□□□□□ -0.27
APOC1-209ENST00000592885 LGMNQ99538 433 aa13.36□□□□□ -0.27
APOC1-209ENST00000592885 APOOQ9BUR5 198 aa13.36□□□□□ -0.27
APOC1-209ENST00000592885 CLPBQ9H078 707 aa13.36□□□□□ -0.27
APOC1-209ENST00000592885 KCTD5Q9NXV2 234 aa13.36□□□□□ -0.27
APOC1-209ENST00000592885 KLQ9UEF7 1012 aa13.36□□□□□ -0.27
APOC1-209ENST00000592885 COQ6Q9Y2Z9 468 aa13.36□□□□□ -0.27
APOC1-209ENST00000592885 PCDHGA8Q9Y5G5 932 aa13.36□□□□□ -0.27
APOC1-209ENST00000592885 DGKBQ9Y6T7 804 aa13.36□□□□□ -0.27
APOC1-209ENST00000592885 PTPRQQ9UMZ3 2332 aa13.35□□□□□ -0.27
APOC1-209ENST00000592885 TEX51A0A1B0GUA7 166 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms