RNA–Protein interactions for RNA: ENST00000592172.5

RFX2-218, Transcript of regulatory factor X2, human

TSL 4

Gene RFX2, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFX2-218	ENST00000592172	LSM8	O95777	96 aa	Known RBP	13.9	□□□□□ -0.18
RFX2-218	ENST00000592172	IGSF6	O95976	241 aa		13.9	□□□□□ -0.18
RFX2-218	ENST00000592172	MME	P08473	750 aa		13.9	□□□□□ -0.18
RFX2-218	ENST00000592172	PLEK	P08567	350 aa	Predicted RBP	13.9	□□□□□ -0.18
RFX2-218	ENST00000592172	HTR1B	P28222	390 aa		13.9	□□□□□ -0.18
RFX2-218	ENST00000592172	MAPK10	P53779	464 aa		13.9	□□□□□ -0.18
RFX2-218	ENST00000592172	RHOA	P61586	193 aa		13.9	□□□□□ -0.18
RFX2-218	ENST00000592172	RAD51	Q06609	339 aa		13.9	□□□□□ -0.18
RFX2-218	ENST00000592172	CLCA4	Q14CN2	919 aa		13.9	□□□□□ -0.18
RFX2-218	ENST00000592172	CERCAM	Q5T4B2	595 aa		13.9	□□□□□ -0.18
RFX2-218	ENST00000592172	ZNF354C	Q86Y25	554 aa		13.9	□□□□□ -0.18
RFX2-218	ENST00000592172	CCDC185	Q8N715	623 aa		13.9	□□□□□ -0.18
RFX2-218	ENST00000592172	PLA2G15	Q8NCC3	412 aa		13.9	□□□□□ -0.18
RFX2-218	ENST00000592172	OR6C4	Q8NGE1	309 aa		13.9	□□□□□ -0.18
RFX2-218	ENST00000592172	GPT2	Q8TD30	523 aa		13.9	□□□□□ -0.18
RFX2-218	ENST00000592172	RXFP2	Q8WXD0	754 aa		13.9	□□□□□ -0.18
RFX2-218	ENST00000592172	USP7	Q93009	1102 aa		13.9	□□□□□ -0.18
RFX2-218	ENST00000592172	EXOC2	Q96KP1	924 aa		13.9	□□□□□ -0.18
RFX2-218	ENST00000592172	WDR92	Q96MX6	357 aa		13.9	□□□□□ -0.18
RFX2-218	ENST00000592172	RBM15	Q96T37	977 aa	Known RBP eCLIP	13.9	□□□□□ -0.18
RFX2-218	ENST00000592172	SEMA3C	Q99985	751 aa		13.9	□□□□□ -0.18
RFX2-218	ENST00000592172	RETREG1	Q9H6L5	497 aa		13.9	□□□□□ -0.18
RFX2-218	ENST00000592172	PCDH12	Q9NPG4	1184 aa		13.9	□□□□□ -0.18
RFX2-218	ENST00000592172	SEPT10	Q9P0V9	454 aa		13.9	□□□□□ -0.18
RFX2-218	ENST00000592172	APPL1	Q9UKG1	709 aa		13.9	□□□□□ -0.18
RFX2-218	ENST00000592172	RNF215	Q9Y6U7	377 aa		13.9	□□□□□ -0.18
RFX2-218	ENST00000592172	UNC13C	Q8NB66	2214 aa		13.9	□□□□□ -0.18
RFX2-218	ENST00000592172	ZSCAN5C	A6NGD5	496 aa	Predicted RBP	13.89	□□□□□ -0.19
RFX2-218	ENST00000592172	PCCB	P05166	539 aa		13.89	□□□□□ -0.19
RFX2-218	ENST00000592172	XPA	P23025	273 aa	Predicted RBP	13.89	□□□□□ -0.19
RFX2-218	ENST00000592172	LIG3	P49916	1009 aa		13.89	□□□□□ -0.19
RFX2-218	ENST00000592172	ELP6	Q0PNE2	266 aa		13.89	□□□□□ -0.19
RFX2-218	ENST00000592172	MAN2A1	Q16706	1144 aa		13.89	□□□□□ -0.19
RFX2-218	ENST00000592172	MIIP	Q5JXC2	388 aa		13.89	□□□□□ -0.19
RFX2-218	ENST00000592172	OGFOD3	Q6PK18	319 aa		13.89	□□□□□ -0.19
RFX2-218	ENST00000592172	SPRED1	Q7Z699	444 aa		13.89	□□□□□ -0.19
RFX2-218	ENST00000592172	DTX1	Q86Y01	620 aa		13.89	□□□□□ -0.19
RFX2-218	ENST00000592172	SLITRK4	Q8IW52	837 aa		13.89	□□□□□ -0.19
RFX2-218	ENST00000592172	PYROXD2	Q8N2H3	581 aa		13.89	□□□□□ -0.19
RFX2-218	ENST00000592172	MSANTD4	Q8NCY6	345 aa		13.89	□□□□□ -0.19
RFX2-218	ENST00000592172	JOSD2	Q8TAC2	188 aa		13.89	□□□□□ -0.19
RFX2-218	ENST00000592172	OR1E3	Q8WZA6	343 aa		13.89	□□□□□ -0.19
RFX2-218	ENST00000592172	HMCES	Q96FZ2	354 aa		13.89	□□□□□ -0.19
RFX2-218	ENST00000592172	FUCA2	Q9BTY2	467 aa		13.89	□□□□□ -0.19
RFX2-218	ENST00000592172	SEMA6C	Q9H3T2	930 aa		13.89	□□□□□ -0.19
RFX2-218	ENST00000592172	LHX3	Q9UBR4	397 aa		13.89	□□□□□ -0.19
RFX2-218	ENST00000592172	TSPAN11	A1L157	253 aa		13.88	□□□□□ -0.19
RFX2-218	ENST00000592172	TMEM202	A6NGA9	273 aa		13.88	□□□□□ -0.19
RFX2-218	ENST00000592172	C2CD4B	A6NLJ0	364 aa		13.88	□□□□□ -0.19
RFX2-218	ENST00000592172		B4DGG1	531 aa		13.88	□□□□□ -0.19
RFX2-218	ENST00000592172	TNF	P01375	233 aa		13.88	□□□□□ -0.19
RFX2-218	ENST00000592172	PRKCG	P05129	697 aa		13.88	□□□□□ -0.19
RFX2-218	ENST00000592172	SFTPC	P11686	197 aa		13.88	□□□□□ -0.19
RFX2-218	ENST00000592172	GLB1	P16278	677 aa		13.88	□□□□□ -0.19
RFX2-218	ENST00000592172	SDC4	P31431	198 aa		13.88	□□□□□ -0.19
RFX2-218	ENST00000592172	HDAC4	P56524	1084 aa		13.88	□□□□□ -0.19
RFX2-218	ENST00000592172	HLTF	Q14527	1009 aa	Known RBP eCLIP	13.88	□□□□□ -0.19
RFX2-218	ENST00000592172	CYTH1	Q15438	398 aa		13.88	□□□□□ -0.19
RFX2-218	ENST00000592172	UGP2	Q16851	508 aa		13.88	□□□□□ -0.19
RFX2-218	ENST00000592172	INO80D	Q53TQ3	878 aa	Predicted RBP	13.88	□□□□□ -0.19
RFX2-218	ENST00000592172	PHF19	Q5T6S3	580 aa		13.88	□□□□□ -0.19
RFX2-218	ENST00000592172	KLHDC7A	Q5VTJ3	777 aa		13.88	□□□□□ -0.19
RFX2-218	ENST00000592172	TAF8	Q7Z7C8	310 aa		13.88	□□□□□ -0.19
RFX2-218	ENST00000592172	ZSWIM9	Q86XI8	627 aa		13.88	□□□□□ -0.19
RFX2-218	ENST00000592172	ZSCAN1	Q8NBB4	408 aa		13.88	□□□□□ -0.19
RFX2-218	ENST00000592172	FAM46D	Q8NEK8	389 aa		13.88	□□□□□ -0.19
RFX2-218	ENST00000592172	EPS8L1	Q8TE68	723 aa		13.88	□□□□□ -0.19
RFX2-218	ENST00000592172	SLC20A1	Q8WUM9	679 aa		13.88	□□□□□ -0.19
RFX2-218	ENST00000592172	CASKIN2	Q8WXE0	1202 aa		13.88	□□□□□ -0.19
RFX2-218	ENST00000592172	JPH3	Q8WXH2	748 aa	Predicted RBP	13.88	□□□□□ -0.19
RFX2-218	ENST00000592172	FUBP1	Q96AE4	644 aa	Known RBP	13.88	□□□□□ -0.19
RFX2-218	ENST00000592172	TMEM159	Q96B96	161 aa		13.88	□□□□□ -0.19
RFX2-218	ENST00000592172	NCAPG	Q9BPX3	1015 aa		13.88	□□□□□ -0.19
RFX2-218	ENST00000592172	NAA15	Q9BXJ9	866 aa	Known RBP	13.88	□□□□□ -0.19
RFX2-218	ENST00000592172	NDST4	Q9H3R1	872 aa		13.88	□□□□□ -0.19
RFX2-218	ENST00000592172	FGF22	Q9HCT0	170 aa		13.88	□□□□□ -0.19
RFX2-218	ENST00000592172	MRPL40	Q9NQ50	206 aa	Known RBP	13.88	□□□□□ -0.19
RFX2-218	ENST00000592172	LRIT1	Q9P2V4	623 aa		13.88	□□□□□ -0.19
RFX2-218	ENST00000592172	DAAM1	Q9Y4D1	1078 aa		13.88	□□□□□ -0.19
RFX2-218	ENST00000592172	DGKB	Q9Y6T7	804 aa		13.88	□□□□□ -0.19
RFX2-218	ENST00000592172	DOPEY2	Q9Y3R5	2298 aa		13.87	□□□□□ -0.19
RFX2-218	ENST00000592172		A0A1W2PQC6	194 aa		13.87	□□□□□ -0.19
RFX2-218	ENST00000592172	RASA4B	C9J798	803 aa		13.87	□□□□□ -0.19
RFX2-218	ENST00000592172	RASA4	O43374	803 aa		13.87	□□□□□ -0.19
RFX2-218	ENST00000592172	BUB1B	O60566	1050 aa	Predicted RBP	13.87	□□□□□ -0.19
RFX2-218	ENST00000592172	PPFIA2	O75334	1257 aa		13.87	□□□□□ -0.19
RFX2-218	ENST00000592172	PNLIP	P16233	465 aa		13.87	□□□□□ -0.19
RFX2-218	ENST00000592172	MMP12	P39900	470 aa		13.87	□□□□□ -0.19
RFX2-218	ENST00000592172	PTPN9	P43378	593 aa		13.87	□□□□□ -0.19
RFX2-218	ENST00000592172	SUOX	P51687	545 aa		13.87	□□□□□ -0.19
RFX2-218	ENST00000592172	TLE1	Q04724	770 aa		13.87	□□□□□ -0.19
RFX2-218	ENST00000592172	MTM1	Q13496	603 aa		13.87	□□□□□ -0.19
RFX2-218	ENST00000592172	SERINC3	Q13530	473 aa		13.87	□□□□□ -0.19
RFX2-218	ENST00000592172	C16orf72	Q14CZ0	275 aa		13.87	□□□□□ -0.19
RFX2-218	ENST00000592172	AGER	Q15109	404 aa		13.87	□□□□□ -0.19
RFX2-218	ENST00000592172	C14orf28	Q4W4Y0	310 aa		13.87	□□□□□ -0.19
RFX2-218	ENST00000592172	VWA3B	Q502W6	1294 aa		13.87	□□□□□ -0.19
RFX2-218	ENST00000592172	ZNF574	Q6ZN55	896 aa	Predicted RBP	13.87	□□□□□ -0.19
RFX2-218	ENST00000592172	STRADA	Q7RTN6	431 aa		13.87	□□□□□ -0.19
RFX2-218	ENST00000592172	RTL3	Q8N8U3	475 aa	Known RBP	13.87	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms