RNA–Protein interactions for RNA: ENST00000592023.5

ERCC1-213, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-213ENST00000592023 MGME1Q9BQP7 344 aa15.3■□□□□ 0.04
ERCC1-213ENST00000592023 TPRP12270 2363 aaKnown RBP15.29■□□□□ 0.04
ERCC1-213ENST00000592023 TDRD6O60522 2096 aaKnown RBP15.29■□□□□ 0.04
ERCC1-213ENST00000592023 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.29■□□□□ 0.04
ERCC1-213ENST00000592023 LRRD1A4D1F6 860 aa15.29■□□□□ 0.04
ERCC1-213ENST00000592023 FAM149AA5PLN7 773 aa15.29■□□□□ 0.04
ERCC1-213ENST00000592023 TRAFD1O14545 582 aaPredicted RBP15.29■□□□□ 0.04
ERCC1-213ENST00000592023 NEBLO76041 1014 aa15.29■□□□□ 0.04
ERCC1-213ENST00000592023 CPP00450 1065 aa15.29■□□□□ 0.04
ERCC1-213ENST00000592023 CSF2P04141 144 aa15.29■□□□□ 0.04
ERCC1-213ENST00000592023 PCCBP05166 539 aa15.29■□□□□ 0.04
ERCC1-213ENST00000592023 CR2P20023 1033 aa15.29■□□□□ 0.04
ERCC1-213ENST00000592023 GARSP41250 739 aaKnown RBP15.29■□□□□ 0.04
ERCC1-213ENST00000592023 HNRNPKP61978 463 aaKnown RBP eCLIP15.29■□□□□ 0.04
ERCC1-213ENST00000592023 DAB2P98082 770 aa15.29■□□□□ 0.04
ERCC1-213ENST00000592023 GALNT2Q10471 571 aa15.29■□□□□ 0.04
ERCC1-213ENST00000592023 LRRC14Q15048 493 aa15.29■□□□□ 0.04
ERCC1-213ENST00000592023 PAFAH1B3Q15102 231 aaKnown RBP15.29■□□□□ 0.04
ERCC1-213ENST00000592023 WSCD2Q2TBF2 565 aa15.29■□□□□ 0.04
ERCC1-213ENST00000592023 PROX2Q3B8N5 592 aa15.29■□□□□ 0.04
ERCC1-213ENST00000592023 MARC1Q5VT66 337 aa15.29■□□□□ 0.04
ERCC1-213ENST00000592023 CCNI2Q6ZMN8 369 aaPredicted RBP15.29■□□□□ 0.04
ERCC1-213ENST00000592023 TMPRSS7Q7RTY8 843 aa15.29■□□□□ 0.04
ERCC1-213ENST00000592023 MAP7D3Q8IWC1 876 aa15.29■□□□□ 0.04
ERCC1-213ENST00000592023 RHOT2Q8IXI1 618 aa15.29■□□□□ 0.04
ERCC1-213ENST00000592023 RBFAQ8N0V3 343 aa15.29■□□□□ 0.04
ERCC1-213ENST00000592023 ZNF548Q8NEK5 533 aaPredicted RBP15.29■□□□□ 0.04
ERCC1-213ENST00000592023 OR4C6Q8NH72 309 aa15.29■□□□□ 0.04
ERCC1-213ENST00000592023 FAF2Q96CS3 445 aa15.29■□□□□ 0.04
ERCC1-213ENST00000592023 NT5MQ9NPB1 228 aa15.29■□□□□ 0.04
ERCC1-213ENST00000592023 PCDHGC4Q9Y5F7 938 aa15.29■□□□□ 0.04
ERCC1-213ENST00000592023 PCDHGA1Q9Y5H4 931 aa15.29■□□□□ 0.04
ERCC1-213ENST00000592023 MAP1BP46821 2468 aaKnown RBP15.29■□□□□ 0.04
ERCC1-213ENST00000592023 PLXNB3Q9ULL4 1909 aa15.29■□□□□ 0.04
ERCC1-213ENST00000592023 TMEM8BA6NDV4 472 aa15.28■□□□□ 0.04
ERCC1-213ENST00000592023 A8MX80 341 aa15.28■□□□□ 0.04
ERCC1-213ENST00000592023 SOCS5O75159 536 aa15.28■□□□□ 0.04
ERCC1-213ENST00000592023 KRT1P04264 644 aa15.28■□□□□ 0.04
ERCC1-213ENST00000592023 ELFN1P0C7U0 828 aa15.28■□□□□ 0.04
ERCC1-213ENST00000592023 GIMD1P0DJR0 217 aa15.28■□□□□ 0.04
ERCC1-213ENST00000592023 ALPPL2P10696 532 aa15.28■□□□□ 0.04
ERCC1-213ENST00000592023 JUNDP17535 347 aa15.28■□□□□ 0.04
ERCC1-213ENST00000592023 CKMT2P17540 419 aa15.28■□□□□ 0.04
ERCC1-213ENST00000592023 GBE1Q04446 702 aa15.28■□□□□ 0.04
ERCC1-213ENST00000592023 TRAF2Q12933 501 aa15.28■□□□□ 0.04
ERCC1-213ENST00000592023 EIF2B5Q13144 721 aaKnown RBP15.28■□□□□ 0.04
ERCC1-213ENST00000592023 ZNF211Q13398 564 aaPredicted RBP15.28■□□□□ 0.04
ERCC1-213ENST00000592023 PTK2BQ14289 1009 aa15.28■□□□□ 0.04
ERCC1-213ENST00000592023 MACC1Q6ZN28 852 aa15.28■□□□□ 0.04
ERCC1-213ENST00000592023 DPPA4Q7L190 304 aa15.28■□□□□ 0.04
ERCC1-213ENST00000592023 PHACTR4Q8IZ21 702 aa15.28■□□□□ 0.04
ERCC1-213ENST00000592023 GALNT15Q8N3T1 639 aa15.28■□□□□ 0.04
ERCC1-213ENST00000592023 PQLC3Q8N755 202 aa15.28■□□□□ 0.04
ERCC1-213ENST00000592023 TC2NQ8N9U0 490 aa15.28■□□□□ 0.04
ERCC1-213ENST00000592023 LRRN4Q8WUT4 740 aa15.28■□□□□ 0.04
ERCC1-213ENST00000592023 RAPGEF5Q92565 580 aa15.28■□□□□ 0.04
ERCC1-213ENST00000592023 TCEAL2Q9H3H9 227 aaPredicted RBP15.28■□□□□ 0.04
ERCC1-213ENST00000592023 NOD2Q9HC29 1040 aa15.28■□□□□ 0.04
ERCC1-213ENST00000592023 B4GALT6Q9UBX8 382 aa15.28■□□□□ 0.04
ERCC1-213ENST00000592023 APOBEC3BQ9UH17 382 aaKnown RBP15.28■□□□□ 0.04
ERCC1-213ENST00000592023 KLF15Q9UIH9 416 aa15.28■□□□□ 0.04
ERCC1-213ENST00000592023 ZMIZ1Q9ULJ6 1067 aa15.28■□□□□ 0.04
ERCC1-213ENST00000592023 TTLL3Q9Y4R7 772 aa15.28■□□□□ 0.04
ERCC1-213ENST00000592023 CHD8Q9HCK8 2581 aa15.27■□□□□ 0.04
ERCC1-213ENST00000592023 MTA2O94776 668 aa15.27■□□□□ 0.04
ERCC1-213ENST00000592023 KDELR1P24390 212 aa15.27■□□□□ 0.04
ERCC1-213ENST00000592023 YPEL5P62699 121 aa15.27■□□□□ 0.04
ERCC1-213ENST00000592023 POLR2LP62875 67 aaKnown RBP15.27■□□□□ 0.04
ERCC1-213ENST00000592023 SMAD1Q15797 465 aaKnown RBP15.27■□□□□ 0.04
ERCC1-213ENST00000592023 TIGD7Q6NT04 549 aaPredicted RBP15.27■□□□□ 0.04
ERCC1-213ENST00000592023 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.27■□□□□ 0.04
ERCC1-213ENST00000592023 LMX1AQ8TE12 382 aa15.27■□□□□ 0.04
ERCC1-213ENST00000592023 RBSNQ9H1K0 784 aa15.27■□□□□ 0.04
ERCC1-213ENST00000592023 NLGN3Q9NZ94 848 aa15.27■□□□□ 0.04
ERCC1-213ENST00000592023 PNMA8BQ9ULN7 279 aaPredicted RBP15.27■□□□□ 0.04
ERCC1-213ENST00000592023 HYOU1Q9Y4L1 999 aa15.27■□□□□ 0.04
ERCC1-213ENST00000592023 OR1A2Q9Y585 309 aa15.27■□□□□ 0.04
ERCC1-213ENST00000592023 LRP4O75096 1905 aa15.26■□□□□ 0.03
ERCC1-213ENST00000592023 NEMP2A6NFY4 417 aa15.26■□□□□ 0.03
ERCC1-213ENST00000592023 K7ESM1 405 aa15.26■□□□□ 0.03
ERCC1-213ENST00000592023 SCAMP1O15126 338 aa15.26■□□□□ 0.03
ERCC1-213ENST00000592023 AQP9O43315 295 aa15.26■□□□□ 0.03
ERCC1-213ENST00000592023 HTRA2O43464 458 aaPredicted RBP15.26■□□□□ 0.03
ERCC1-213ENST00000592023 KRT37O76014 449 aa15.26■□□□□ 0.03
ERCC1-213ENST00000592023 RECQL5O94762 991 aaPredicted RBP15.26■□□□□ 0.03
ERCC1-213ENST00000592023 MYF5P13349 255 aa15.26■□□□□ 0.03
ERCC1-213ENST00000592023 TNNT1P13805 278 aa15.26■□□□□ 0.03
ERCC1-213ENST00000592023 ARHGAP25P42331 645 aa15.26■□□□□ 0.03
ERCC1-213ENST00000592023 ITKQ08881 620 aa15.26■□□□□ 0.03
ERCC1-213ENST00000592023 ACOX1Q15067 660 aa15.26■□□□□ 0.03
ERCC1-213ENST00000592023 IFI16Q16666 785 aaKnown RBP15.26■□□□□ 0.03
ERCC1-213ENST00000592023 DEFB133Q30KQ1 61 aa15.26■□□□□ 0.03
ERCC1-213ENST00000592023 HES3Q5TGS1 186 aa15.26■□□□□ 0.03
ERCC1-213ENST00000592023 LIPIQ6XZB0 460 aa15.26■□□□□ 0.03
ERCC1-213ENST00000592023 LRRC49Q8IUZ0 686 aa15.26■□□□□ 0.03
ERCC1-213ENST00000592023 KDF1Q8NAX2 398 aaPredicted RBP15.26■□□□□ 0.03
ERCC1-213ENST00000592023 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.26■□□□□ 0.03
ERCC1-213ENST00000592023 MAML1Q92585 1016 aa15.26■□□□□ 0.03
ERCC1-213ENST00000592023 APOLD1Q96LR9 279 aa15.26■□□□□ 0.03
ERCC1-213ENST00000592023 ZNF830Q96NB3 372 aaPredicted RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms