RNA–Protein interactions for RNA: ENST00000592017.5

CLIP3-205, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

TSL 5

Gene CLIP3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-205ENST00000592017 DTLQ9NZJ0 730 aa14.05□□□□□ -0.16
CLIP3-205ENST00000592017 DKK3Q9UBP4 350 aa14.05□□□□□ -0.16
CLIP3-205ENST00000592017 ZMIZ1Q9ULJ6 1067 aa14.05□□□□□ -0.16
CLIP3-205ENST00000592017 DUSP10Q9Y6W6 482 aa14.05□□□□□ -0.16
CLIP3-205ENST00000592017 DMXL2Q8TDJ6 3036 aa14.05□□□□□ -0.16
CLIP3-205ENST00000592017 IGLON5A6NGN9 336 aa14.04□□□□□ -0.16
CLIP3-205ENST00000592017 YKT6O15498 198 aa14.04□□□□□ -0.16
CLIP3-205ENST00000592017 TSPAN6O43657 245 aa14.04□□□□□ -0.16
CLIP3-205ENST00000592017 PAK4O96013 591 aaPredicted RBP14.04□□□□□ -0.16
CLIP3-205ENST00000592017 THEGLP0DJG4 465 aa14.04□□□□□ -0.16
CLIP3-205ENST00000592017 TIMP2P16035 220 aa14.04□□□□□ -0.16
CLIP3-205ENST00000592017 MX2P20592 715 aa14.04□□□□□ -0.16
CLIP3-205ENST00000592017 HSPA9P38646 679 aaKnown RBP14.04□□□□□ -0.16
CLIP3-205ENST00000592017 MARCKSL1P49006 195 aa14.04□□□□□ -0.16
CLIP3-205ENST00000592017 SEMG2Q02383 582 aa14.04□□□□□ -0.16
CLIP3-205ENST00000592017 ITKQ08881 620 aa14.04□□□□□ -0.16
CLIP3-205ENST00000592017 NSUN2Q08J23 767 aaKnown RBP eCLIP14.04□□□□□ -0.16
CLIP3-205ENST00000592017 SGCGQ13326 291 aa14.04□□□□□ -0.16
CLIP3-205ENST00000592017 INAVAQ3KP66 663 aa14.04□□□□□ -0.16
CLIP3-205ENST00000592017 CCDC157Q569K6 752 aa14.04□□□□□ -0.16
CLIP3-205ENST00000592017 KAZNQ674X7 775 aa14.04□□□□□ -0.16
CLIP3-205ENST00000592017 BRAT1Q6PJG6 821 aa14.04□□□□□ -0.16
CLIP3-205ENST00000592017 MFSD7Q6UXD7 560 aa14.04□□□□□ -0.16
CLIP3-205ENST00000592017 NPNTQ6UXI9 565 aa14.04□□□□□ -0.16
CLIP3-205ENST00000592017 GCNT7Q6ZNI0 430 aa14.04□□□□□ -0.16
CLIP3-205ENST00000592017 TMPRSS7Q7RTY8 843 aa14.04□□□□□ -0.16
CLIP3-205ENST00000592017 ZSWIM9Q86XI8 627 aa14.04□□□□□ -0.16
CLIP3-205ENST00000592017 LRRC49Q8IUZ0 686 aa14.04□□□□□ -0.16
CLIP3-205ENST00000592017 CCDC50Q8IVM0 306 aa14.04□□□□□ -0.16
CLIP3-205ENST00000592017 PLD5Q8N7P1 536 aa14.04□□□□□ -0.16
CLIP3-205ENST00000592017 OR13H1Q8NG92 308 aa14.04□□□□□ -0.16
CLIP3-205ENST00000592017 PDCD6IPQ8WUM4 868 aaKnown RBP14.04□□□□□ -0.16
CLIP3-205ENST00000592017 BMFQ96LC9 184 aa14.04□□□□□ -0.16
CLIP3-205ENST00000592017 ZNF641Q96N77 438 aaPredicted RBP14.04□□□□□ -0.16
CLIP3-205ENST00000592017 MGME1Q9BQP7 344 aa14.04□□□□□ -0.16
CLIP3-205ENST00000592017 SLC17A9Q9BYT1 436 aa14.04□□□□□ -0.16
CLIP3-205ENST00000592017 LACRTQ9GZZ8 138 aa14.04□□□□□ -0.16
CLIP3-205ENST00000592017 PCDH12Q9NPG4 1184 aa14.04□□□□□ -0.16
CLIP3-205ENST00000592017 FTSJ1Q9UET6 329 aa14.04□□□□□ -0.16
CLIP3-205ENST00000592017 WDFY3Q8IZQ1 3526 aa14.04□□□□□ -0.16
CLIP3-205ENST00000592017 TSPAN11A1L157 253 aa14.03□□□□□ -0.16
CLIP3-205ENST00000592017 MACROD2A1Z1Q3 448 aa14.03□□□□□ -0.16
CLIP3-205ENST00000592017 TMEM8BA6NDV4 472 aa14.03□□□□□ -0.16
CLIP3-205ENST00000592017 ZNF487B1APH4 448 aa14.03□□□□□ -0.16
CLIP3-205ENST00000592017 AREL1O15033 823 aa14.03□□□□□ -0.16
CLIP3-205ENST00000592017 MAGEC1O60732 1142 aa14.03□□□□□ -0.16
CLIP3-205ENST00000592017 MMP20O60882 483 aa14.03□□□□□ -0.16
CLIP3-205ENST00000592017 ZFXP17010 805 aaPredicted RBP14.03□□□□□ -0.16
CLIP3-205ENST00000592017 GSDMDP57764 484 aa14.03□□□□□ -0.16
CLIP3-205ENST00000592017 ELP6Q0PNE2 266 aa14.03□□□□□ -0.16
CLIP3-205ENST00000592017 SLC10A2Q12908 348 aaPredicted RBP14.03□□□□□ -0.16
CLIP3-205ENST00000592017 DNAJC3Q13217 504 aa14.03□□□□□ -0.16
CLIP3-205ENST00000592017 UGP2Q16851 508 aa14.03□□□□□ -0.16
CLIP3-205ENST00000592017 SLC9A4Q6AI14 798 aa14.03□□□□□ -0.16
CLIP3-205ENST00000592017 ERAP2Q6P179 960 aa14.03□□□□□ -0.16
CLIP3-205ENST00000592017 PTAR1Q7Z6K3 402 aaPredicted RBP14.03□□□□□ -0.16
CLIP3-205ENST00000592017 ABI3BPQ7Z7G0 1075 aa14.03□□□□□ -0.16
CLIP3-205ENST00000592017 VSIG1Q86XK7 387 aa14.03□□□□□ -0.16
CLIP3-205ENST00000592017 CCDC13Q8IYE1 715 aa14.03□□□□□ -0.16
CLIP3-205ENST00000592017 SLC25A45Q8N413 288 aa14.03□□□□□ -0.16
CLIP3-205ENST00000592017 OXR1Q8N573 874 aa14.03□□□□□ -0.16
CLIP3-205ENST00000592017 KRT35Q92764 455 aa14.03□□□□□ -0.16
CLIP3-205ENST00000592017 CNDP2Q96KP4 475 aaKnown RBP14.03□□□□□ -0.16
CLIP3-205ENST00000592017 NUDCD1Q96RS6 583 aa14.03□□□□□ -0.16
CLIP3-205ENST00000592017 C1QTNF2Q9BXJ5 285 aa14.03□□□□□ -0.16
CLIP3-205ENST00000592017 NOD2Q9HC29 1040 aa14.03□□□□□ -0.16
CLIP3-205ENST00000592017 TRIM10Q9UDY6 481 aa14.03□□□□□ -0.16
CLIP3-205ENST00000592017 ATP8A1Q9Y2Q0 1164 aa14.03□□□□□ -0.16
CLIP3-205ENST00000592017 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.03□□□□□ -0.16
CLIP3-205ENST00000592017 PCDHGC4Q9Y5F7 938 aa14.03□□□□□ -0.16
CLIP3-205ENST00000592017 HS3ST3A1Q9Y663 406 aa14.03□□□□□ -0.16
CLIP3-205ENST00000592017 PLXNA2O75051 1894 aa14.03□□□□□ -0.16
CLIP3-205ENST00000592017 A0A0U1RQJ8 604 aa14.02□□□□□ -0.17
CLIP3-205ENST00000592017 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.02□□□□□ -0.17
CLIP3-205ENST00000592017 POM121BA6NF01 834 aa14.02□□□□□ -0.17
CLIP3-205ENST00000592017 BTNL10A8MVZ5 291 aa14.02□□□□□ -0.17
CLIP3-205ENST00000592017 TAF4O00268 1085 aa14.02□□□□□ -0.17
CLIP3-205ENST00000592017 TRIM38O00635 465 aa14.02□□□□□ -0.17
CLIP3-205ENST00000592017 ENC1O14682 589 aa14.02□□□□□ -0.17
CLIP3-205ENST00000592017 MATN3O15232 486 aa14.02□□□□□ -0.17
CLIP3-205ENST00000592017 SDC3O75056 442 aa14.02□□□□□ -0.17
CLIP3-205ENST00000592017 LDOC1O95751 146 aaPredicted RBP14.02□□□□□ -0.17
CLIP3-205ENST00000592017 CPP00450 1065 aa14.02□□□□□ -0.17
CLIP3-205ENST00000592017 KRT10P13645 584 aa14.02□□□□□ -0.17
CLIP3-205ENST00000592017 CR2P20023 1033 aa14.02□□□□□ -0.17
CLIP3-205ENST00000592017 CCNCP24863 283 aa14.02□□□□□ -0.17
CLIP3-205ENST00000592017 CDKN2BP42772 138 aa14.02□□□□□ -0.17
CLIP3-205ENST00000592017 AP1B1Q10567 949 aa14.02□□□□□ -0.17
CLIP3-205ENST00000592017 KIF5AQ12840 1032 aa14.02□□□□□ -0.17
CLIP3-205ENST00000592017 SMAD1Q15797 465 aaKnown RBP14.02□□□□□ -0.17
CLIP3-205ENST00000592017 DHRS13Q6UX07 377 aa14.02□□□□□ -0.17
CLIP3-205ENST00000592017 KDM7AQ6ZMT4 941 aa14.02□□□□□ -0.17
CLIP3-205ENST00000592017 SPOCD1Q6ZMY3 1216 aa14.02□□□□□ -0.17
CLIP3-205ENST00000592017 Q6ZSR6 202 aa14.02□□□□□ -0.17
CLIP3-205ENST00000592017 ZSCAN30Q86W11 494 aa14.02□□□□□ -0.17
CLIP3-205ENST00000592017 KATNAL2Q8IYT4 538 aa14.02□□□□□ -0.17
CLIP3-205ENST00000592017 SLC22A18ASQ8N1D0 253 aa14.02□□□□□ -0.17
CLIP3-205ENST00000592017 TXLNBQ8N3L3 684 aa14.02□□□□□ -0.17
CLIP3-205ENST00000592017 HCAR2Q8TDS4 363 aa14.02□□□□□ -0.17
CLIP3-205ENST00000592017 ZCCHC14Q8WYQ9 949 aaKnown RBP14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms