RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 HDAC11Q96DB2 347 aa10.15□□□□□ -0.78
BRCA1-227ENST00000591849 CNTNAP3BQ96NU0 1288 aa10.15□□□□□ -0.78
BRCA1-227ENST00000591849 ELF4Q99607 663 aaPredicted RBP10.15□□□□□ -0.78
BRCA1-227ENST00000591849 SEMA3CQ99985 751 aa10.15□□□□□ -0.78
BRCA1-227ENST00000591849 MGME1Q9BQP7 344 aa10.15□□□□□ -0.78
BRCA1-227ENST00000591849 C1QTNF2Q9BXJ5 285 aa10.15□□□□□ -0.78
BRCA1-227ENST00000591849 CNTNAP3Q9BZ76 1288 aa10.15□□□□□ -0.78
BRCA1-227ENST00000591849 TSGA10Q9BZW7 698 aa10.15□□□□□ -0.78
BRCA1-227ENST00000591849 LACRTQ9GZZ8 138 aa10.15□□□□□ -0.78
BRCA1-227ENST00000591849 BRD8Q9H0E9 1235 aa10.15□□□□□ -0.78
BRCA1-227ENST00000591849 NOD2Q9HC29 1040 aa10.15□□□□□ -0.78
BRCA1-227ENST00000591849 GGT7Q9UJ14 662 aa10.15□□□□□ -0.78
BRCA1-227ENST00000591849 AMFRQ9UKV5 643 aa10.15□□□□□ -0.78
BRCA1-227ENST00000591849 PCDHGB2Q9Y5G2 931 aa10.15□□□□□ -0.78
BRCA1-227ENST00000591849 PI4KAP42356 2102 aa10.15□□□□□ -0.79
BRCA1-227ENST00000591849 CFAP47Q6ZTR5 3102 aa10.14□□□□□ -0.79
BRCA1-227ENST00000591849 A0A1B0GTQ1 180 aa10.14□□□□□ -0.79
BRCA1-227ENST00000591849 TSPAN11A1L157 253 aa10.14□□□□□ -0.79
BRCA1-227ENST00000591849 CCDC66A2RUB6 948 aa10.14□□□□□ -0.79
BRCA1-227ENST00000591849 C3orf70A6NLC5 250 aaPredicted RBP10.14□□□□□ -0.79
BRCA1-227ENST00000591849 KCNK1O00180 336 aa10.14□□□□□ -0.79
BRCA1-227ENST00000591849 RIOK3O14730 519 aaKnown RBP10.14□□□□□ -0.79
BRCA1-227ENST00000591849 AREL1O15033 823 aa10.14□□□□□ -0.79
BRCA1-227ENST00000591849 FLRT2O43155 660 aa10.14□□□□□ -0.79
BRCA1-227ENST00000591849 PJA2O43164 708 aa10.14□□□□□ -0.79
BRCA1-227ENST00000591849 KRT86O43790 486 aa10.14□□□□□ -0.79
BRCA1-227ENST00000591849 SOCS5O75159 536 aa10.14□□□□□ -0.79
BRCA1-227ENST00000591849 GJB3O75712 270 aa10.14□□□□□ -0.79
BRCA1-227ENST00000591849 PEX11BO96011 259 aa10.14□□□□□ -0.79
BRCA1-227ENST00000591849 ELFN1P0C7U0 828 aa10.14□□□□□ -0.79
BRCA1-227ENST00000591849 CYP2A6P11509 494 aaPredicted RBP10.14□□□□□ -0.79
BRCA1-227ENST00000591849 TGM2P21980 687 aa10.14□□□□□ -0.79
BRCA1-227ENST00000591849 CTNNA2P26232 953 aa10.14□□□□□ -0.79
BRCA1-227ENST00000591849 CDKN2BP42772 138 aa10.14□□□□□ -0.79
BRCA1-227ENST00000591849 RABIFP47224 123 aa10.14□□□□□ -0.79
BRCA1-227ENST00000591849 NR2C2P49116 596 aa10.14□□□□□ -0.79
BRCA1-227ENST00000591849 LIG3P49916 1009 aa10.14□□□□□ -0.79
BRCA1-227ENST00000591849 THOP1P52888 689 aa10.14□□□□□ -0.79
BRCA1-227ENST00000591849 RWDD2BP57060 319 aa10.14□□□□□ -0.79
BRCA1-227ENST00000591849 SIM1P81133 766 aaPredicted RBP10.14□□□□□ -0.79
BRCA1-227ENST00000591849 SEMG2Q02383 582 aa10.14□□□□□ -0.79
BRCA1-227ENST00000591849 DSC2Q02487 901 aa10.14□□□□□ -0.79
BRCA1-227ENST00000591849 ARHGEF7Q14155 803 aa10.14□□□□□ -0.79
BRCA1-227ENST00000591849 LRRC14Q15048 493 aa10.14□□□□□ -0.79
BRCA1-227ENST00000591849 ACOX1Q15067 660 aa10.14□□□□□ -0.79
BRCA1-227ENST00000591849 TFDP3Q5H9I0 405 aa10.14□□□□□ -0.79
BRCA1-227ENST00000591849 DENND2CQ68D51 928 aa10.14□□□□□ -0.79
BRCA1-227ENST00000591849 SLC9A4Q6AI14 798 aa10.14□□□□□ -0.79
BRCA1-227ENST00000591849 PGBD5Q8N414 524 aa10.14□□□□□ -0.79
BRCA1-227ENST00000591849 TEX26Q8N6G2 289 aa10.14□□□□□ -0.79
BRCA1-227ENST00000591849 UBL4BQ8N7F7 174 aa10.14□□□□□ -0.79
BRCA1-227ENST00000591849 DENND6BQ8NEG7 585 aa10.14□□□□□ -0.79
BRCA1-227ENST00000591849 OR13H1Q8NG92 308 aa10.14□□□□□ -0.79
BRCA1-227ENST00000591849 FATE1Q969F0 183 aa10.14□□□□□ -0.79
BRCA1-227ENST00000591849 LENG8Q96PV6 779 aaPredicted RBP10.14□□□□□ -0.79
BRCA1-227ENST00000591849 LGMNQ99538 433 aa10.14□□□□□ -0.79
BRCA1-227ENST00000591849 FERMT1Q9BQL6 677 aa10.14□□□□□ -0.79
BRCA1-227ENST00000591849 HEMGNQ9BXL5 484 aa10.14□□□□□ -0.79
BRCA1-227ENST00000591849 ERVMER34-1Q9H9K5 563 aa10.14□□□□□ -0.79
BRCA1-227ENST00000591849 AMACRQ9UHK6 382 aa10.14□□□□□ -0.79
BRCA1-227ENST00000591849 PHTF1Q9UMS5 762 aa10.14□□□□□ -0.79
BRCA1-227ENST00000591849 COQ6Q9Y2Z9 468 aa10.14□□□□□ -0.79
BRCA1-227ENST00000591849 REXO2Q9Y3B8 237 aaKnown RBP10.14□□□□□ -0.79
BRCA1-227ENST00000591849 RAI2Q9Y5P3 530 aa10.14□□□□□ -0.79
BRCA1-227ENST00000591849 GOLGA8CPA6NN73 597 aa10.13□□□□□ -0.79
BRCA1-227ENST00000591849 H7C0C1 242 aa10.13□□□□□ -0.79
BRCA1-227ENST00000591849 GIPC1O14908 333 aa10.13□□□□□ -0.79
BRCA1-227ENST00000591849 RAD51BO15315 384 aa10.13□□□□□ -0.79
BRCA1-227ENST00000591849 ARHGAP6O43182 974 aa10.13□□□□□ -0.79
BRCA1-227ENST00000591849 C6P13671 934 aa10.13□□□□□ -0.79
BRCA1-227ENST00000591849 GRK6P43250 576 aa10.13□□□□□ -0.79
BRCA1-227ENST00000591849 TNNT3P45378 269 aaPredicted RBP10.13□□□□□ -0.79
BRCA1-227ENST00000591849 ATP5OP48047 213 aa10.13□□□□□ -0.79
BRCA1-227ENST00000591849 COPS2P61201 443 aa10.13□□□□□ -0.79
BRCA1-227ENST00000591849 PPIDQ08752 370 aaKnown RBP10.13□□□□□ -0.79
BRCA1-227ENST00000591849 PDE1CQ14123 709 aaPredicted RBP10.13□□□□□ -0.79
BRCA1-227ENST00000591849 PTK2BQ14289 1009 aa10.13□□□□□ -0.79
BRCA1-227ENST00000591849 FGL2Q14314 439 aa10.13□□□□□ -0.79
BRCA1-227ENST00000591849 TRIP6Q15654 476 aaKnown RBP10.13□□□□□ -0.79
BRCA1-227ENST00000591849 N4BP2L1Q5TBK1 243 aaPredicted RBP10.13□□□□□ -0.79
BRCA1-227ENST00000591849 CCDC70Q6NSX1 233 aa10.13□□□□□ -0.79
BRCA1-227ENST00000591849 USP45Q70EL2 814 aa10.13□□□□□ -0.79
BRCA1-227ENST00000591849 B4GALNT4Q76KP1 1039 aa10.13□□□□□ -0.79
BRCA1-227ENST00000591849 PIP4P1Q86T03 277 aa10.13□□□□□ -0.79
BRCA1-227ENST00000591849 SPATS2Q86XZ4 545 aaKnown RBP10.13□□□□□ -0.79
BRCA1-227ENST00000591849 GATAD2AQ86YP4 633 aa10.13□□□□□ -0.79
BRCA1-227ENST00000591849 TMEM139Q8IV31 216 aa10.13□□□□□ -0.79
BRCA1-227ENST00000591849 TMEM145Q8NBT3 493 aa10.13□□□□□ -0.79
BRCA1-227ENST00000591849 TFB1MQ8WVM0 346 aaKnown RBP10.13□□□□□ -0.79
BRCA1-227ENST00000591849 MAML1Q92585 1016 aa10.13□□□□□ -0.79
BRCA1-227ENST00000591849 KRT35Q92764 455 aa10.13□□□□□ -0.79
BRCA1-227ENST00000591849 HAUS1Q96CS2 278 aa10.13□□□□□ -0.79
BRCA1-227ENST00000591849 CAMK1GQ96NX5 476 aa10.13□□□□□ -0.79
BRCA1-227ENST00000591849 AGAP3Q96P47 875 aa10.13□□□□□ -0.79
BRCA1-227ENST00000591849 CDC6Q99741 560 aa10.13□□□□□ -0.79
BRCA1-227ENST00000591849 GRPEL1Q9HAV7 217 aa10.13□□□□□ -0.79
BRCA1-227ENST00000591849 SALL4Q9UJQ4 1053 aa10.13□□□□□ -0.79
BRCA1-227ENST00000591849 GUCA1BQ9UMX6 200 aa10.13□□□□□ -0.79
BRCA1-227ENST00000591849 PCDHA3Q9Y5H8 950 aa10.13□□□□□ -0.79
BRCA1-227ENST00000591849 FAM208BQ5VWN6 2430 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms