RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 BOCQ9BWV1 1114 aa10.52□□□□□ -0.73
VPS4B-207ENST00000591519 C1QTNF7Q9BXJ2 289 aa10.52□□□□□ -0.73
VPS4B-207ENST00000591519 KLC2Q9H0B6 622 aa10.52□□□□□ -0.73
VPS4B-207ENST00000591519 CATSPERBQ9H7T0 1116 aa10.52□□□□□ -0.73
VPS4B-207ENST00000591519 SEPT11Q9NVA2 429 aaKnown RBP10.52□□□□□ -0.73
VPS4B-207ENST00000591519 DONSONQ9NYP3 566 aa10.52□□□□□ -0.73
VPS4B-207ENST00000591519 GGT7Q9UJ14 662 aa10.52□□□□□ -0.73
VPS4B-207ENST00000591519 PNMA8BQ9ULN7 279 aaPredicted RBP10.52□□□□□ -0.73
VPS4B-207ENST00000591519 FZD10Q9ULW2 581 aa10.52□□□□□ -0.73
VPS4B-207ENST00000591519 ITM2BQ9Y287 266 aa10.52□□□□□ -0.73
VPS4B-207ENST00000591519 A0A1B0GTH6 734 aa10.51□□□□□ -0.73
VPS4B-207ENST00000591519 TEX51A0A1B0GUA7 166 aa10.51□□□□□ -0.73
VPS4B-207ENST00000591519 TMEM110-MUSTN1A8MSY1 372 aa10.51□□□□□ -0.73
VPS4B-207ENST00000591519 RASA4BC9J798 803 aa10.51□□□□□ -0.73
VPS4B-207ENST00000591519 LMO7DNF2Z398 122 aa10.51□□□□□ -0.73
VPS4B-207ENST00000591519 FGF10O15520 208 aaPredicted RBP10.51□□□□□ -0.73
VPS4B-207ENST00000591519 CCP110O43303 1012 aa10.51□□□□□ -0.73
VPS4B-207ENST00000591519 RASA4O43374 803 aa10.51□□□□□ -0.73
VPS4B-207ENST00000591519 USP12O75317 370 aa10.51□□□□□ -0.73
VPS4B-207ENST00000591519 GCATO75600 419 aa10.51□□□□□ -0.73
VPS4B-207ENST00000591519 IGSF6O95976 241 aa10.51□□□□□ -0.73
VPS4B-207ENST00000591519 MPOP05164 745 aa10.51□□□□□ -0.73
VPS4B-207ENST00000591519 TGM2P21980 687 aa10.51□□□□□ -0.73
VPS4B-207ENST00000591519 IGFALSP35858 605 aa10.51□□□□□ -0.73
VPS4B-207ENST00000591519 EIF4A3P38919 411 aaKnown RBP10.51□□□□□ -0.73
VPS4B-207ENST00000591519 THOP1P52888 689 aa10.51□□□□□ -0.73
VPS4B-207ENST00000591519 RHOAP61586 193 aa10.51□□□□□ -0.73
VPS4B-207ENST00000591519 RPL7AP62424 266 aaKnown RBP10.51□□□□□ -0.73
VPS4B-207ENST00000591519 GRM3Q14832 879 aa10.51□□□□□ -0.73
VPS4B-207ENST00000591519 CDKN3Q16667 212 aa10.51□□□□□ -0.73
VPS4B-207ENST00000591519 DEFB133Q30KQ1 61 aa10.51□□□□□ -0.73
VPS4B-207ENST00000591519 ACAD10Q6JQN1 1059 aa10.51□□□□□ -0.73
VPS4B-207ENST00000591519 LVRNQ6Q4G3 990 aa10.51□□□□□ -0.73
VPS4B-207ENST00000591519 MACC1Q6ZN28 852 aa10.51□□□□□ -0.73
VPS4B-207ENST00000591519 GPR155Q7Z3F1 870 aa10.51□□□□□ -0.73
VPS4B-207ENST00000591519 TRIM46Q7Z4K8 759 aa10.51□□□□□ -0.73
VPS4B-207ENST00000591519 SPACA3Q8IXA5 215 aa10.51□□□□□ -0.73
VPS4B-207ENST00000591519 SDR16C5Q8N3Y7 309 aa10.51□□□□□ -0.73
VPS4B-207ENST00000591519 LMX1AQ8TE12 382 aa10.51□□□□□ -0.73
VPS4B-207ENST00000591519 HMCESQ96FZ2 354 aa10.51□□□□□ -0.73
VPS4B-207ENST00000591519 VCPIP1Q96JH7 1222 aa10.51□□□□□ -0.73
VPS4B-207ENST00000591519 ZNF641Q96N77 438 aaPredicted RBP10.51□□□□□ -0.73
VPS4B-207ENST00000591519 SLC46A1Q96NT5 459 aa10.51□□□□□ -0.73
VPS4B-207ENST00000591519 IL12RB2Q99665 862 aa10.51□□□□□ -0.73
VPS4B-207ENST00000591519 LRRC19Q9H756 370 aa10.51□□□□□ -0.73
VPS4B-207ENST00000591519 PDFQ9HBH1 243 aa10.51□□□□□ -0.73
VPS4B-207ENST00000591519 ASCL3Q9NQ33 180 aa10.51□□□□□ -0.73
VPS4B-207ENST00000591519 MBNL1Q9NR56 388 aaKnown RBP10.51□□□□□ -0.73
VPS4B-207ENST00000591519 IFNKQ9P0W0 207 aa10.51□□□□□ -0.73
VPS4B-207ENST00000591519 RP1P56715 2156 aa10.5□□□□□ -0.73
VPS4B-207ENST00000591519 TSPAN11A1L157 253 aa10.5□□□□□ -0.73
VPS4B-207ENST00000591519 CPED1A4D0V7 1026 aa10.5□□□□□ -0.73
VPS4B-207ENST00000591519 CFAP69A5D8W1 941 aa10.5□□□□□ -0.73
VPS4B-207ENST00000591519 EIF4E1BA6NMX2 242 aaKnown RBP10.5□□□□□ -0.73
VPS4B-207ENST00000591519 EIF3CLB5ME19 914 aaKnown RBP10.5□□□□□ -0.73
VPS4B-207ENST00000591519 YY2O15391 372 aa10.5□□□□□ -0.73
VPS4B-207ENST00000591519 TCEA3O75764 348 aa10.5□□□□□ -0.73
VPS4B-207ENST00000591519 CCDC172P0C7W6 258 aa10.5□□□□□ -0.73
VPS4B-207ENST00000591519 ITIH2P19823 946 aa10.5□□□□□ -0.73
VPS4B-207ENST00000591519 CSNK1DP48730 415 aa10.5□□□□□ -0.73
VPS4B-207ENST00000591519 NDST2P52849 883 aa10.5□□□□□ -0.73
VPS4B-207ENST00000591519 ADKP55263 362 aaKnown RBP10.5□□□□□ -0.73
VPS4B-207ENST00000591519 PCBP4P57723 403 aaKnown RBP10.5□□□□□ -0.73
VPS4B-207ENST00000591519 GABREP78334 506 aa10.5□□□□□ -0.73
VPS4B-207ENST00000591519 PPARDQ03181 441 aa10.5□□□□□ -0.73
VPS4B-207ENST00000591519 ELP6Q0PNE2 266 aa10.5□□□□□ -0.73
VPS4B-207ENST00000591519 NR1I3Q14994 352 aa10.5□□□□□ -0.73
VPS4B-207ENST00000591519 NR0B2Q15466 257 aa10.5□□□□□ -0.73
VPS4B-207ENST00000591519 UGP2Q16851 508 aa10.5□□□□□ -0.73
VPS4B-207ENST00000591519 WSCD2Q2TBF2 565 aa10.5□□□□□ -0.73
VPS4B-207ENST00000591519 PRRT3Q5FWE3 981 aa10.5□□□□□ -0.73
VPS4B-207ENST00000591519 PPP1R2P3Q6NXS1 205 aa10.5□□□□□ -0.73
VPS4B-207ENST00000591519 DNAJC24Q6P3W2 148 aa10.5□□□□□ -0.73
VPS4B-207ENST00000591519 SCYL2Q6P3W7 929 aa10.5□□□□□ -0.73
VPS4B-207ENST00000591519 GUSBP11Q6P575 273 aa10.5□□□□□ -0.73
VPS4B-207ENST00000591519 EFL1Q7Z2Z2 1120 aaKnown RBP10.5□□□□□ -0.73
VPS4B-207ENST00000591519 IRF2BP2Q7Z5L9 587 aa10.5□□□□□ -0.73
VPS4B-207ENST00000591519 VPS36Q86VN1 386 aa10.5□□□□□ -0.73
VPS4B-207ENST00000591519 DNAAF5Q86Y56 855 aa10.5□□□□□ -0.73
VPS4B-207ENST00000591519 PHACTR4Q8IZ21 702 aa10.5□□□□□ -0.73
VPS4B-207ENST00000591519 MCOLN2Q8IZK6 566 aa10.5□□□□□ -0.73
VPS4B-207ENST00000591519 RBFAQ8N0V3 343 aa10.5□□□□□ -0.73
VPS4B-207ENST00000591519 WDR48Q8TAF3 677 aa10.5□□□□□ -0.73
VPS4B-207ENST00000591519 CXorf40AQ8TE69 158 aa10.5□□□□□ -0.73
VPS4B-207ENST00000591519 SNRNP27Q8WVK2 155 aaKnown RBP10.5□□□□□ -0.73
VPS4B-207ENST00000591519 GLMNQ92990 594 aa10.5□□□□□ -0.73
VPS4B-207ENST00000591519 NAT6Q93015 286 aa10.5□□□□□ -0.73
VPS4B-207ENST00000591519 PRR11Q96HE9 360 aaPredicted RBP10.5□□□□□ -0.73
VPS4B-207ENST00000591519 FCRL3Q96P31 734 aaPredicted RBP10.5□□□□□ -0.73
VPS4B-207ENST00000591519 EIF3CQ99613 913 aaKnown RBP10.5□□□□□ -0.73
VPS4B-207ENST00000591519 SYT11Q9BT88 431 aa10.5□□□□□ -0.73
VPS4B-207ENST00000591519 DPH1Q9BZG8 443 aa10.5□□□□□ -0.73
VPS4B-207ENST00000591519 SLC13A1Q9BZW2 595 aa10.5□□□□□ -0.73
VPS4B-207ENST00000591519 CLPBQ9H078 707 aa10.5□□□□□ -0.73
VPS4B-207ENST00000591519 TCEAL2Q9H3H9 227 aaPredicted RBP10.5□□□□□ -0.73
VPS4B-207ENST00000591519 SUV39H2Q9H5I1 410 aa10.5□□□□□ -0.73
VPS4B-207ENST00000591519 LHX3Q9UBR4 397 aa10.5□□□□□ -0.73
VPS4B-207ENST00000591519 APOBEC3BQ9UH17 382 aaKnown RBP10.5□□□□□ -0.73
VPS4B-207ENST00000591519 MYO6Q9UM54 1294 aa10.5□□□□□ -0.73
VPS4B-207ENST00000591519 PCDHGA8Q9Y5G5 932 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms